RNA–Protein interactions for RNA: ENST00000485796.5

HDAC7-223, Transcript of histone deacetylase 7, human

TSL 5

Gene HDAC7, Length 724 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDAC7-223	ENST00000485796	KRTAP12-3	P60328	96 aa		4.61	□□□□□ -1.67
HDAC7-223	ENST00000485796	PP632	Q6XCG6	107 aa		4.59	□□□□□ -1.67
HDAC7-223	ENST00000485796	KRTAP19-3	Q7Z4W3	81 aa		4.57	□□□□□ -1.68
HDAC7-223	ENST00000485796	SPRR2D	P22532	72 aa		4.55	□□□□□ -1.68
HDAC7-223	ENST00000485796	LCE5A	Q5TCM9	118 aa		4.54	□□□□□ -1.68
HDAC7-223	ENST00000485796	MT1L	Q93083	61 aa		4.54	□□□□□ -1.68
HDAC7-223	ENST00000485796	KRTAP20-1	Q3LI63	56 aa		4.5	□□□□□ -1.69
HDAC7-223	ENST00000485796	MT1G	P13640	62 aa		4.47	□□□□□ -1.69
HDAC7-223	ENST00000485796	KRTAP2-3	P0C7H8	128 aa		4.46	□□□□□ -1.7
HDAC7-223	ENST00000485796	KRTAP2-4	Q9BYR9	128 aa		4.46	□□□□□ -1.7
HDAC7-223	ENST00000485796	MT1M	Q8N339	61 aa		4.45	□□□□□ -1.7
HDAC7-223	ENST00000485796	KRTAP15-1	Q3LI76	137 aa		4.43	□□□□□ -1.7
HDAC7-223	ENST00000485796	PRAC1	Q96KF2	57 aa		4.42	□□□□□ -1.7
HDAC7-223	ENST00000485796	KRTAP4-7	Q9BYR0	210 aa		4.41	□□□□□ -1.7
HDAC7-223	ENST00000485796	KRTAP4-3	Q9BYR4	195 aa		4.41	□□□□□ -1.7
HDAC7-223	ENST00000485796	LCE3B	Q5TA77	95 aa		4.4	□□□□□ -1.71
HDAC7-223	ENST00000485796	DST	Q03001	7570 aa	Known RBP	4.37	□□□□□ -1.71
HDAC7-223	ENST00000485796	KTN1-AS1	Q86SY8	53 aa		4.35	□□□□□ -1.71
HDAC7-223	ENST00000485796	KRTAP2-2	Q9BYT5	123 aa		4.34	□□□□□ -1.71
HDAC7-223	ENST00000485796	KRTAP2-1	Q9BYU5	128 aa		4.34	□□□□□ -1.71
HDAC7-223	ENST00000485796	KRTAP19-4	Q3LI73	84 aa		4.32	□□□□□ -1.72
HDAC7-223	ENST00000485796	LCE3C	Q5T5A8	94 aa		4.28	□□□□□ -1.72
HDAC7-223	ENST00000485796	LOC100996750	A0A140TA64	210 aa		4.16	□□□□□ -1.74
HDAC7-223	ENST00000485796	SVIP	Q8NHG7	77 aa		4.16	□□□□□ -1.74
HDAC7-223	ENST00000485796	KRTAP4-9	Q9BYQ8	210 aa		4.08	□□□□□ -1.76
HDAC7-223	ENST00000485796	KRTAP9-6	A8MVA2	160 aa		4.07	□□□□□ -1.76
HDAC7-223	ENST00000485796	KRTAP5-5	Q701N2	237 aa	Predicted RBP	4.05	□□□□□ -1.76
HDAC7-223	ENST00000485796	KRTAP5-4	Q6L8H1	288 aa		4.04	□□□□□ -1.76
HDAC7-223	ENST00000485796	HMCN1	Q96RW7	5635 aa		4.01	□□□□□ -1.77
HDAC7-223	ENST00000485796	LCE4A	Q5TA78	99 aa		4.01	□□□□□ -1.77
HDAC7-223	ENST00000485796	MT4	P47944	62 aa		3.99	□□□□□ -1.77
HDAC7-223	ENST00000485796	LCE1D	Q5T752	114 aa		3.98	□□□□□ -1.77
HDAC7-223	ENST00000485796	SYNE1	Q8NF91	8797 aa	Known RBP	3.95	□□□□□ -1.78
HDAC7-223	ENST00000485796	KRTAP4-6	Q9BYQ5	205 aa		3.94	□□□□□ -1.78
HDAC7-223	ENST00000485796	SPRR5	A0A1B0GTR4	108 aa		3.9	□□□□□ -1.79
HDAC7-223	ENST00000485796	MT1A	P04731	61 aa		3.85	□□□□□ -1.79
HDAC7-223	ENST00000485796	KRTAP6-1	Q3LI64	71 aa		3.85	□□□□□ -1.79
HDAC7-223	ENST00000485796	GPR98	Q8WXG9	6306 aa		3.83	□□□□□ -1.8
HDAC7-223	ENST00000485796	KRTAP12-4	P60329	112 aa		3.81	□□□□□ -1.8
HDAC7-223	ENST00000485796	KRTAP20-2	Q3LI61	65 aa		3.8	□□□□□ -1.8
HDAC7-223	ENST00000485796	AHNAK2	Q8IVF2	5795 aa		3.78	□□□□□ -1.8
HDAC7-223	ENST00000485796	KRTAP9-4	Q9BYQ2	154 aa		3.7	□□□□□ -1.82
HDAC7-223	ENST00000485796	KRTAP5-3	Q6L8H2	238 aa		3.69	□□□□□ -1.82
HDAC7-223	ENST00000485796	LUZP6	Q538Z0	58 aa		3.66	□□□□□ -1.82
HDAC7-223	ENST00000485796	KRTAP6-2	Q3LI66	62 aa		3.61	□□□□□ -1.83
HDAC7-223	ENST00000485796	KRTAP5-2	Q701N4	177 aa		3.6	□□□□□ -1.83
HDAC7-223	ENST00000485796	KRTAP5-10	Q6L8G5	202 aa		3.53	□□□□□ -1.84
HDAC7-223	ENST00000485796	MT3	P25713	68 aa		3.51	□□□□□ -1.85
HDAC7-223	ENST00000485796	KRTAP4-11	Q9BYQ6	195 aa		3.38	□□□□□ -1.87
HDAC7-223	ENST00000485796	NDUFAF8	A1L188	74 aa		3.33	□□□□□ -1.88
HDAC7-223	ENST00000485796	KRTAP5-7	Q6L8G8	165 aa		3.32	□□□□□ -1.88
HDAC7-223	ENST00000485796	OBSCN	Q5VST9	7968 aa		3.31	□□□□□ -1.88
HDAC7-223	ENST00000485796	KRTAP5-8	O75690	187 aa		3.28	□□□□□ -1.88
HDAC7-223	ENST00000485796	MUC5AC	P98088	5654 aa		3.27	□□□□□ -1.89
HDAC7-223	ENST00000485796	KRTAP5-1	Q6L8H4	278 aa		3.18	□□□□□ -1.9
HDAC7-223	ENST00000485796	LCE3D	Q9BYE3	92 aa		3.16	□□□□□ -1.9
HDAC7-223	ENST00000485796	LCE1E	Q5T753	118 aa		3.1	□□□□□ -1.91
HDAC7-223	ENST00000485796	MUC5B	Q9HC84	5762 aa	Predicted RBP	3.09	□□□□□ -1.91
HDAC7-223	ENST00000485796	AHNAK	Q09666	5890 aa	Known RBP	3.07	□□□□□ -1.92
HDAC7-223	ENST00000485796	LCE3E	Q5T5B0	92 aa		3.04	□□□□□ -1.92
HDAC7-223	ENST00000485796	KRTAP9-9	Q9BYP9	154 aa		2.99	□□□□□ -1.93
HDAC7-223	ENST00000485796	KRTAP4-2	Q9BYR5	136 aa		2.97	□□□□□ -1.93
HDAC7-223	ENST00000485796	LCE1B	Q5T7P3	118 aa		2.96	□□□□□ -1.94
HDAC7-223	ENST00000485796	LCE1C	Q5T751	118 aa		2.89	□□□□□ -1.95
HDAC7-223	ENST00000485796		A0A0A0MQY5	61 aa		2.84	□□□□□ -1.95
HDAC7-223	ENST00000485796	INE1	O15225	51 aa		2.72	□□□□□ -1.97
HDAC7-223	ENST00000485796	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	2.67	□□□□□ -1.98
HDAC7-223	ENST00000485796	KRTAP4-12	Q9BQ66	201 aa		2.62	□□□□□ -1.99
HDAC7-223	ENST00000485796	KRTAP5-11	Q6L8G4	156 aa		2.58	□□□□□ -2
HDAC7-223	ENST00000485796	KRTAP21-2	Q3LI59	83 aa		2.53	□□□□□ -2
HDAC7-223	ENST00000485796	PRM1	P04553	51 aa		2.51	□□□□□ -2.01
HDAC7-223	ENST00000485796	LCE1F	Q5T754	118 aa		2.41	□□□□□ -2.02
HDAC7-223	ENST00000485796		H3BS24	57 aa		2.32	□□□□□ -2.04
HDAC7-223	ENST00000485796	KRTAP4-4	Q9BYR3	166 aa		2.32	□□□□□ -2.04
HDAC7-223	ENST00000485796	PHGR1	C9JFL3	82 aa		2.23	□□□□□ -2.05
HDAC7-223	ENST00000485796	MUC19	Q7Z5P9	8384 aa		2.05	□□□□□ -2.08
HDAC7-223	ENST00000485796	KRTAP21-1	Q3LI58	79 aa		1.5	□□□□□ -2.17
HDAC7-223	ENST00000485796	MUC16	Q8WXI7	14507 aa		1.46	□□□□□ -2.18

Retrieved 78 of 20,778 RNA–protein pairs in 184.7 ms