RNA–Protein interactions for RNA: ENST00000485541.1

SRRM1-214, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 5

Gene SRRM1, Length 679 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-214ENST00000485541 LCE1EQ5T753 118 aa3.24□□□□□ -1.89
SRRM1-214ENST00000485541 KRTAP5-9P26371 169 aa3.23□□□□□ -1.89
SRRM1-214ENST00000485541 KRTAP10-5P60370 271 aa3.23□□□□□ -1.89
SRRM1-214ENST00000485541 MT1XP80297 61 aa3.23□□□□□ -1.89
SRRM1-214ENST00000485541 KRTAP2-2Q9BYT5 123 aa3.22□□□□□ -1.89
SRRM1-214ENST00000485541 KRTAP5-4Q6L8H1 288 aa3.21□□□□□ -1.9
SRRM1-214ENST00000485541 KRTAP4-4Q9BYR3 166 aa3.17□□□□□ -1.9
SRRM1-214ENST00000485541 KRTAP10-12P60413 245 aa3.15□□□□□ -1.91
SRRM1-214ENST00000485541 KRTAP8-1Q8IUC2 63 aa3.15□□□□□ -1.91
SRRM1-214ENST00000485541 LCE3AQ5TA76 89 aa3.13□□□□□ -1.91
SRRM1-214ENST00000485541 KRTAP19-6Q3LI70 58 aa3.05□□□□□ -1.92
SRRM1-214ENST00000485541 SPRR5A0A1B0GTR4 108 aa3.04□□□□□ -1.92
SRRM1-214ENST00000485541 KRTAP12-3P60328 96 aa3.04□□□□□ -1.92
SRRM1-214ENST00000485541 LUZP6Q538Z0 58 aa3.01□□□□□ -1.93
SRRM1-214ENST00000485541 NDUFAF8A1L188 74 aa2.97□□□□□ -1.93
SRRM1-214ENST00000485541 USH2AO75445 5202 aa2.96□□□□□ -1.94
SRRM1-214ENST00000485541 KRTAP19-5Q3LI72 72 aa2.93□□□□□ -1.94
SRRM1-214ENST00000485541 SSPOA2VEC9 5147 aa2.92□□□□□ -1.94
SRRM1-214ENST00000485541 KRTAP19-7Q3SYF9 63 aa2.89□□□□□ -1.95
SRRM1-214ENST00000485541 LCE3CQ5T5A8 94 aa2.85□□□□□ -1.95
SRRM1-214ENST00000485541 MT1EP04732 61 aa2.84□□□□□ -1.95
SRRM1-214ENST00000485541 OBSCNQ5VST9 7968 aa2.81□□□□□ -1.96
SRRM1-214ENST00000485541 MT1LQ93083 61 aa2.8□□□□□ -1.96
SRRM1-214ENST00000485541 KRTAP9-6A8MVA2 160 aa2.77□□□□□ -1.97
SRRM1-214ENST00000485541 LCE1FQ5T754 118 aa2.77□□□□□ -1.97
SRRM1-214ENST00000485541 KRTAP4-3Q9BYR4 195 aa2.75□□□□□ -1.97
SRRM1-214ENST00000485541 KRTAP5-2Q701N4 177 aa2.74□□□□□ -1.97
SRRM1-214ENST00000485541 MT1GP13640 62 aa2.73□□□□□ -1.97
SRRM1-214ENST00000485541 CRCT1Q9UGL9 99 aa2.73□□□□□ -1.97
SRRM1-214ENST00000485541 KRTAP19-3Q7Z4W3 81 aa2.72□□□□□ -1.97
SRRM1-214ENST00000485541 FCGBPQ9Y6R7 5405 aaPredicted RBP2.72□□□□□ -1.97
SRRM1-214ENST00000485541 KMT2DO14686 5537 aa2.72□□□□□ -1.97
SRRM1-214ENST00000485541 MT1MQ8N339 61 aa2.67□□□□□ -1.98
SRRM1-214ENST00000485541 SPRR2FQ96RM1 72 aa2.66□□□□□ -1.98
SRRM1-214ENST00000485541 FSIP2Q5CZC0 6907 aa2.61□□□□□ -1.99
SRRM1-214ENST00000485541 KRTAP2-3P0C7H8 128 aa2.57□□□□□ -2
SRRM1-214ENST00000485541 KRTAP2-4Q9BYR9 128 aa2.57□□□□□ -2
SRRM1-214ENST00000485541 KRTAP2-1Q9BYU5 128 aa2.57□□□□□ -2
SRRM1-214ENST00000485541 INE1O15225 51 aa2.55□□□□□ -2
SRRM1-214ENST00000485541 KRTAP6-3Q3LI67 103 aa2.55□□□□□ -2
SRRM1-214ENST00000485541 SPRR2EP22531 72 aa2.5□□□□□ -2.01
SRRM1-214ENST00000485541 SPRR2BP35325 72 aa2.5□□□□□ -2.01
SRRM1-214ENST00000485541 SPRR2AP35326 72 aa2.5□□□□□ -2.01
SRRM1-214ENST00000485541 MUC12Q9UKN1 5478 aa2.49□□□□□ -2.01
SRRM1-214ENST00000485541 MACF1Q9UPN3 7388 aaKnown RBP2.48□□□□□ -2.01
SRRM1-214ENST00000485541 MT1AP04731 61 aa2.41□□□□□ -2.02
SRRM1-214ENST00000485541 SPRR2DP22532 72 aa2.41□□□□□ -2.02
SRRM1-214ENST00000485541 KRTAP5-5Q701N2 237 aaPredicted RBP2.41□□□□□ -2.02
SRRM1-214ENST00000485541 LCE3EQ5T5B0 92 aa2.35□□□□□ -2.03
SRRM1-214ENST00000485541 SYNE2Q8WXH0 6885 aaKnown RBP2.35□□□□□ -2.03
SRRM1-214ENST00000485541 KRTAP6-1Q3LI64 71 aa2.33□□□□□ -2.04
SRRM1-214ENST00000485541 MDN1Q9NU22 5596 aa2.31□□□□□ -2.04
SRRM1-214ENST00000485541 KRTAP5-8O75690 187 aa2.31□□□□□ -2.04
SRRM1-214ENST00000485541 DSTQ03001 7570 aaKnown RBP2.24□□□□□ -2.05
SRRM1-214ENST00000485541 KRTAP12-4P60329 112 aa2.22□□□□□ -2.05
SRRM1-214ENST00000485541 NEBP20929 6669 aa2.17□□□□□ -2.06
SRRM1-214ENST00000485541 LCE3DQ9BYE3 92 aa2.16□□□□□ -2.06
SRRM1-214ENST00000485541 SYNE1Q8NF91 8797 aaKnown RBP2.13□□□□□ -2.07
SRRM1-214ENST00000485541 KRTAP6-2Q3LI66 62 aa2.11□□□□□ -2.07
SRRM1-214ENST00000485541 KRTAP20-1Q3LI63 56 aa2.1□□□□□ -2.07
SRRM1-214ENST00000485541 KRTAP20-2Q3LI61 65 aa2.08□□□□□ -2.08
SRRM1-214ENST00000485541 LCE1CQ5T751 118 aa2.08□□□□□ -2.08
SRRM1-214ENST00000485541 LCE1BQ5T7P3 118 aa2.08□□□□□ -2.08
SRRM1-214ENST00000485541 MT4P47944 62 aa2.03□□□□□ -2.08
SRRM1-214ENST00000485541 HMCN1Q96RW7 5635 aa1.89□□□□□ -2.11
SRRM1-214ENST00000485541 PRM1P04553 51 aa1.87□□□□□ -2.11
SRRM1-214ENST00000485541 MUC19Q7Z5P9 8384 aa1.84□□□□□ -2.11
SRRM1-214ENST00000485541 KRTAP5-10Q6L8G5 202 aa1.77□□□□□ -2.13
SRRM1-214ENST00000485541 KRTAP5-7Q6L8G8 165 aa1.74□□□□□ -2.13
SRRM1-214ENST00000485541 MUC5ACP98088 5654 aa1.65□□□□□ -2.14
SRRM1-214ENST00000485541 AHNAK2Q8IVF2 5795 aa1.63□□□□□ -2.15
SRRM1-214ENST00000485541 KRTAP21-2Q3LI59 83 aa1.54□□□□□ -2.16
SRRM1-214ENST00000485541 MUC5BQ9HC84 5762 aaPredicted RBP1.41□□□□□ -2.18
SRRM1-214ENST00000485541 GPR98Q8WXG9 6306 aa1.34□□□□□ -2.2
SRRM1-214ENST00000485541 PHGR1C9JFL3 82 aa1.3□□□□□ -2.2
SRRM1-214ENST00000485541 KRTAP21-1Q3LI58 79 aa1.21□□□□□ -2.22
SRRM1-214ENST00000485541 AHNAKQ09666 5890 aaKnown RBP1.15□□□□□ -2.23
SRRM1-214ENST00000485541 MUC16Q8WXI7 14507 aa0.89□□□□□ -2.27
Retrieved 78 of 20,778 RNA–protein pairs in 96.2 ms