RNA–Protein interactions for RNA: ENST00000485093.1

TM9SF3-205, Transcript of transmembrane 9 superfamily member 3, humanhuman

TSL 5

Gene TM9SF3, Length 407 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-205ENST00000485093 M0QZ58 72 aa1.96□□□□□ -2.1
TM9SF3-205ENST00000485093 SPINT4Q6UDR6 99 aa1.96□□□□□ -2.1
TM9SF3-205ENST00000485093 HMCN2Q8NDA2 5059 aa1.95□□□□□ -2.1
TM9SF3-205ENST00000485093 LINC01554Q52M75 96 aa1.95□□□□□ -2.1
TM9SF3-205ENST00000485093 R4GN34 69 aa1.94□□□□□ -2.1
TM9SF3-205ENST00000485093 KRTAP12-1P59990 96 aa1.92□□□□□ -2.1
TM9SF3-205ENST00000485093 CRIPTQ9P021 101 aa1.92□□□□□ -2.1
TM9SF3-205ENST00000485093 M0R2T5 61 aa1.91□□□□□ -2.1
TM9SF3-205ENST00000485093 ROMO1P60602 79 aa1.91□□□□□ -2.1
TM9SF3-205ENST00000485093 FLGP20930 4061 aaPredicted RBP1.91□□□□□ -2.1
TM9SF3-205ENST00000485093 RNF213Q63HN8 5207 aa1.9□□□□□ -2.11
TM9SF3-205ENST00000485093 MT1HP80294 61 aa1.88□□□□□ -2.11
TM9SF3-205ENST00000485093 KRTAP25-1Q3LHN0 102 aa1.87□□□□□ -2.11
TM9SF3-205ENST00000485093 MUC2Q02817 5179 aa1.86□□□□□ -2.11
TM9SF3-205ENST00000485093 KRTAP5-7Q6L8G8 165 aa1.84□□□□□ -2.11
TM9SF3-205ENST00000485093 C10orf95Q9H7T3 257 aa1.84□□□□□ -2.11
TM9SF3-205ENST00000485093 FAT4Q6V0I7 4981 aa1.83□□□□□ -2.12
TM9SF3-205ENST00000485093 MT2AP02795 61 aa1.83□□□□□ -2.12
TM9SF3-205ENST00000485093 MT1FP04733 61 aa1.82□□□□□ -2.12
TM9SF3-205ENST00000485093 PLAC4Q8WY50 150 aa1.82□□□□□ -2.12
TM9SF3-205ENST00000485093 SPRR2GQ9BYE4 73 aa1.8□□□□□ -2.12
TM9SF3-205ENST00000485093 TNP1P09430 55 aa1.75□□□□□ -2.13
TM9SF3-205ENST00000485093 KRTAP19-8Q3LI54 63 aa1.75□□□□□ -2.13
TM9SF3-205ENST00000485093 MT1BP07438 61 aa1.73□□□□□ -2.13
TM9SF3-205ENST00000485093 HMCN1Q96RW7 5635 aa1.7□□□□□ -2.14
TM9SF3-205ENST00000485093 MT1XP80297 61 aa1.69□□□□□ -2.14
TM9SF3-205ENST00000485093 KRTAP21-2Q3LI59 83 aa1.69□□□□□ -2.14
TM9SF3-205ENST00000485093 KRTAP6-3Q3LI67 103 aa1.69□□□□□ -2.14
TM9SF3-205ENST00000485093 PRO2289Q9P1D8 64 aa1.66□□□□□ -2.14
TM9SF3-205ENST00000485093 USH2AO75445 5202 aa1.62□□□□□ -2.15
TM9SF3-205ENST00000485093 KRTAP8-1Q8IUC2 63 aa1.6□□□□□ -2.15
TM9SF3-205ENST00000485093 KRTAP12-3P60328 96 aa1.59□□□□□ -2.15
TM9SF3-205ENST00000485093 KRTAP12-4P60329 112 aa1.59□□□□□ -2.15
TM9SF3-205ENST00000485093 KRTAP19-5Q3LI72 72 aa1.57□□□□□ -2.16
TM9SF3-205ENST00000485093 KRTAP19-6Q3LI70 58 aa1.55□□□□□ -2.16
TM9SF3-205ENST00000485093 SSPOA2VEC9 5147 aa1.55□□□□□ -2.16
TM9SF3-205ENST00000485093 KMT2DO14686 5537 aa1.52□□□□□ -2.17
TM9SF3-205ENST00000485093 FSIP2Q5CZC0 6907 aa1.51□□□□□ -2.17
TM9SF3-205ENST00000485093 KRTAP19-7Q3SYF9 63 aa1.5□□□□□ -2.17
TM9SF3-205ENST00000485093 MT1EP04732 61 aa1.48□□□□□ -2.17
TM9SF3-205ENST00000485093 MT1LQ93083 61 aa1.47□□□□□ -2.17
TM9SF3-205ENST00000485093 FCGBPQ9Y6R7 5405 aaPredicted RBP1.46□□□□□ -2.18
TM9SF3-205ENST00000485093 INE1O15225 51 aa1.43□□□□□ -2.18
TM9SF3-205ENST00000485093 CRCT1Q9UGL9 99 aa1.43□□□□□ -2.18
TM9SF3-205ENST00000485093 SPRR2FQ96RM1 72 aa1.42□□□□□ -2.18
TM9SF3-205ENST00000485093 MT1GP13640 62 aa1.4□□□□□ -2.19
TM9SF3-205ENST00000485093 KRTAP19-3Q7Z4W3 81 aa1.4□□□□□ -2.19
TM9SF3-205ENST00000485093 MT1MQ8N339 61 aa1.39□□□□□ -2.19
TM9SF3-205ENST00000485093 MUC12Q9UKN1 5478 aa1.36□□□□□ -2.19
TM9SF3-205ENST00000485093 SPRR2EP22531 72 aa1.33□□□□□ -2.2
TM9SF3-205ENST00000485093 SPRR2BP35325 72 aa1.33□□□□□ -2.2
TM9SF3-205ENST00000485093 SPRR2AP35326 72 aa1.33□□□□□ -2.2
TM9SF3-205ENST00000485093 SYNE2Q8WXH0 6885 aaKnown RBP1.32□□□□□ -2.2
TM9SF3-205ENST00000485093 KRTAP2-3P0C7H8 128 aa1.32□□□□□ -2.2
TM9SF3-205ENST00000485093 KRTAP2-4Q9BYR9 128 aa1.32□□□□□ -2.2
TM9SF3-205ENST00000485093 KRTAP2-1Q9BYU5 128 aa1.32□□□□□ -2.2
TM9SF3-205ENST00000485093 MACF1Q9UPN3 7388 aaKnown RBP1.29□□□□□ -2.2
TM9SF3-205ENST00000485093 SPRR2DP22532 72 aa1.28□□□□□ -2.2
TM9SF3-205ENST00000485093 NEBP20929 6669 aa1.27□□□□□ -2.21
TM9SF3-205ENST00000485093 MDN1Q9NU22 5596 aa1.26□□□□□ -2.21
TM9SF3-205ENST00000485093 MT1AP04731 61 aa1.24□□□□□ -2.21
TM9SF3-205ENST00000485093 KRTAP6-1Q3LI64 71 aa1.24□□□□□ -2.21
TM9SF3-205ENST00000485093 GPR98Q8WXG9 6306 aa1.22□□□□□ -2.21
TM9SF3-205ENST00000485093 DSTQ03001 7570 aaKnown RBP1.2□□□□□ -2.22
TM9SF3-205ENST00000485093 SYNE1Q8NF91 8797 aaKnown RBP1.16□□□□□ -2.22
TM9SF3-205ENST00000485093 MT4P47944 62 aa1.13□□□□□ -2.23
TM9SF3-205ENST00000485093 KRTAP6-2Q3LI66 62 aa1.13□□□□□ -2.23
TM9SF3-205ENST00000485093 KRTAP20-1Q3LI63 56 aa1.12□□□□□ -2.23
TM9SF3-205ENST00000485093 KRTAP20-2Q3LI61 65 aa1.07□□□□□ -2.24
TM9SF3-205ENST00000485093 AHNAK2Q8IVF2 5795 aa1.07□□□□□ -2.24
TM9SF3-205ENST00000485093 PRM1P04553 51 aa1.02□□□□□ -2.25
TM9SF3-205ENST00000485093 KRTAP5-10Q6L8G5 202 aa0.98□□□□□ -2.25
TM9SF3-205ENST00000485093 AHNAKQ09666 5890 aaKnown RBP0.95□□□□□ -2.26
TM9SF3-205ENST00000485093 MUC5BQ9HC84 5762 aaPredicted RBP0.93□□□□□ -2.26
TM9SF3-205ENST00000485093 MUC5ACP98088 5654 aa0.9□□□□□ -2.27
TM9SF3-205ENST00000485093 MUC16Q8WXI7 14507 aa0.76□□□□□ -2.29
TM9SF3-205ENST00000485093 PHGR1C9JFL3 82 aa0.65□□□□□ -2.31
TM9SF3-205ENST00000485093 KRTAP21-1Q3LI58 79 aa0.61□□□□□ -2.31
Retrieved 78 of 20,778 RNA–protein pairs in 77 ms