RNA–Protein interactions for RNA: ENST00000485063.1

MACF1-220, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 3

Gene MACF1, Length 438 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-220ENST00000485063 KRTAP10-12P60413 245 aa3.11□□□□□ -1.91
MACF1-220ENST00000485063 KRTAP12-1P59990 96 aa3.1□□□□□ -1.91
MACF1-220ENST00000485063 A8MU10 97 aa3.07□□□□□ -1.92
MACF1-220ENST00000485063 SPRR2EP22531 72 aa3.06□□□□□ -1.92
MACF1-220ENST00000485063 SPRR2BP35325 72 aa3.06□□□□□ -1.92
MACF1-220ENST00000485063 SPRR2AP35326 72 aa3.06□□□□□ -1.92
MACF1-220ENST00000485063 K7ERS5 55 aa3.05□□□□□ -1.92
MACF1-220ENST00000485063 KMT2DO14686 5537 aa3.02□□□□□ -1.93
MACF1-220ENST00000485063 MIR22HGQ0VDD5 57 aa3.01□□□□□ -1.93
MACF1-220ENST00000485063 KRTAP20-1Q3LI63 56 aa3.01□□□□□ -1.93
MACF1-220ENST00000485063 MUC12Q9UKN1 5478 aa3□□□□□ -1.93
MACF1-220ENST00000485063 PSPHP1O15172 72 aa2.98□□□□□ -1.93
MACF1-220ENST00000485063 TNP1P09430 55 aa2.98□□□□□ -1.93
MACF1-220ENST00000485063 A6NED7 52 aa2.97□□□□□ -1.93
MACF1-220ENST00000485063 KRTAP2-3P0C7H8 128 aa2.96□□□□□ -1.94
MACF1-220ENST00000485063 KRTAP2-4Q9BYR9 128 aa2.96□□□□□ -1.94
MACF1-220ENST00000485063 NEBP20929 6669 aa2.96□□□□□ -1.94
MACF1-220ENST00000485063 SPRR2DP22532 72 aa2.95□□□□□ -1.94
MACF1-220ENST00000485063 C10orf95Q9H7T3 257 aa2.94□□□□□ -1.94
MACF1-220ENST00000485063 KRTAP9-6A8MVA2 160 aa2.92□□□□□ -1.94
MACF1-220ENST00000485063 MDN1Q9NU22 5596 aa2.91□□□□□ -1.94
MACF1-220ENST00000485063 OBSCNQ5VST9 7968 aa2.91□□□□□ -1.94
MACF1-220ENST00000485063 CDC42SE1Q9NRR8 79 aa2.91□□□□□ -1.94
MACF1-220ENST00000485063 KRTAP19-7Q3SYF9 63 aa2.9□□□□□ -1.95
MACF1-220ENST00000485063 MT1EP04732 61 aa2.88□□□□□ -1.95
MACF1-220ENST00000485063 KRTAP19-5Q3LI72 72 aa2.88□□□□□ -1.95
MACF1-220ENST00000485063 KRTAP2-1Q9BYU5 128 aa2.88□□□□□ -1.95
MACF1-220ENST00000485063 LCE3AQ5TA76 89 aa2.87□□□□□ -1.95
MACF1-220ENST00000485063 KRTAP19-3Q7Z4W3 81 aa2.86□□□□□ -1.95
MACF1-220ENST00000485063 KRTAP4-3Q9BYR4 195 aa2.86□□□□□ -1.95
MACF1-220ENST00000485063 KRTAP25-1Q3LHN0 102 aa2.85□□□□□ -1.95
MACF1-220ENST00000485063 PP632Q6XCG6 107 aa2.84□□□□□ -1.95
MACF1-220ENST00000485063 MT1GP13640 62 aa2.82□□□□□ -1.96
MACF1-220ENST00000485063 KRTAP5-2Q701N4 177 aa2.8□□□□□ -1.96
MACF1-220ENST00000485063 KRTAP12-3P60328 96 aa2.78□□□□□ -1.96
MACF1-220ENST00000485063 MT1LQ93083 61 aa2.78□□□□□ -1.96
MACF1-220ENST00000485063 ROMO1P60602 79 aa2.76□□□□□ -1.97
MACF1-220ENST00000485063 MT1MQ8N339 61 aa2.75□□□□□ -1.97
MACF1-220ENST00000485063 BRK1Q8WUW1 75 aa2.75□□□□□ -1.97
MACF1-220ENST00000485063 LCE1FQ5T754 118 aa2.69□□□□□ -1.98
MACF1-220ENST00000485063 DSTQ03001 7570 aaKnown RBP2.69□□□□□ -1.98
MACF1-220ENST00000485063 PRO0628Q9UI54 55 aa2.64□□□□□ -1.99
MACF1-220ENST00000485063 A0A0A0MQY5 61 aa2.63□□□□□ -1.99
MACF1-220ENST00000485063 PMAIP1Q13794 54 aa2.63□□□□□ -1.99
MACF1-220ENST00000485063 MT4P47944 62 aa2.57□□□□□ -2
MACF1-220ENST00000485063 LCE3CQ5T5A8 94 aa2.56□□□□□ -2
MACF1-220ENST00000485063 KRTAP5-5Q701N2 237 aaPredicted RBP2.48□□□□□ -2.01
MACF1-220ENST00000485063 KTN1-AS1Q86SY8 53 aa2.48□□□□□ -2.01
MACF1-220ENST00000485063 KRTAP12-4P60329 112 aa2.47□□□□□ -2.01
MACF1-220ENST00000485063 SPRR5A0A1B0GTR4 108 aa2.43□□□□□ -2.02
MACF1-220ENST00000485063 GPR98Q8WXG9 6306 aa2.41□□□□□ -2.02
MACF1-220ENST00000485063 KRTAP5-8O75690 187 aa2.41□□□□□ -2.02
MACF1-220ENST00000485063 KRTAP20-2Q3LI61 65 aa2.41□□□□□ -2.02
MACF1-220ENST00000485063 HMCN1Q96RW7 5635 aa2.39□□□□□ -2.03
MACF1-220ENST00000485063 MT1AP04731 61 aa2.38□□□□□ -2.03
MACF1-220ENST00000485063 KRTAP6-1Q3LI64 71 aa2.34□□□□□ -2.03
MACF1-220ENST00000485063 PRAC1Q96KF2 57 aa2.32□□□□□ -2.04
MACF1-220ENST00000485063 KRTAP5-10Q6L8G5 202 aa2.31□□□□□ -2.04
MACF1-220ENST00000485063 SYNE1Q8NF91 8797 aaKnown RBP2.3□□□□□ -2.04
MACF1-220ENST00000485063 LCE3EQ5T5B0 92 aa2.3□□□□□ -2.04
MACF1-220ENST00000485063 AHNAK2Q8IVF2 5795 aa2.23□□□□□ -2.05
MACF1-220ENST00000485063 KRTAP6-2Q3LI66 62 aa2.22□□□□□ -2.05
MACF1-220ENST00000485063 KRTAP5-7Q6L8G8 165 aa2.22□□□□□ -2.05
MACF1-220ENST00000485063 LCE1CQ5T751 118 aa2.21□□□□□ -2.06
MACF1-220ENST00000485063 LCE1BQ5T7P3 118 aa2.21□□□□□ -2.06
MACF1-220ENST00000485063 LUZP6Q538Z0 58 aa2.19□□□□□ -2.06
MACF1-220ENST00000485063 NDUFAF8A1L188 74 aa2.17□□□□□ -2.06
MACF1-220ENST00000485063 LCE3DQ9BYE3 92 aa1.89□□□□□ -2.11
MACF1-220ENST00000485063 MUC19Q7Z5P9 8384 aa1.86□□□□□ -2.11
MACF1-220ENST00000485063 MUC5ACP98088 5654 aa1.82□□□□□ -2.12
MACF1-220ENST00000485063 AHNAKQ09666 5890 aaKnown RBP1.81□□□□□ -2.12
MACF1-220ENST00000485063 MUC5BQ9HC84 5762 aaPredicted RBP1.81□□□□□ -2.12
MACF1-220ENST00000485063 INE1O15225 51 aa1.65□□□□□ -2.15
MACF1-220ENST00000485063 KRTAP21-2Q3LI59 83 aa1.59□□□□□ -2.15
MACF1-220ENST00000485063 PHGR1C9JFL3 82 aa1.41□□□□□ -2.18
MACF1-220ENST00000485063 PRM1P04553 51 aa1.39□□□□□ -2.19
MACF1-220ENST00000485063 KRTAP21-1Q3LI58 79 aa1.05□□□□□ -2.24
MACF1-220ENST00000485063 MUC16Q8WXI7 14507 aa0.91□□□□□ -2.26
Retrieved 78 of 20,778 RNA–protein pairs in 147.5 ms