RNA–Protein interactions for RNA: ENST00000484886.1

SNX17-206, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 568 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-206ENST00000484886 A6NED7 52 aa6.87□□□□□ -1.31
SNX17-206ENST00000484886 MT1GP13640 62 aa6.86□□□□□ -1.31
SNX17-206ENST00000484886 PP632Q6XCG6 107 aa6.85□□□□□ -1.31
SNX17-206ENST00000484886 MT1LQ93083 61 aa6.82□□□□□ -1.32
SNX17-206ENST00000484886 RPS28P62857 69 aaKnown RBP6.8□□□□□ -1.32
SNX17-206ENST00000484886 KRTAP25-1Q3LHN0 102 aa6.8□□□□□ -1.32
SNX17-206ENST00000484886 MT1MQ8N339 61 aa6.75□□□□□ -1.33
SNX17-206ENST00000484886 KRTAP12-3P60328 96 aa6.74□□□□□ -1.33
SNX17-206ENST00000484886 DSTQ03001 7570 aaKnown RBP6.72□□□□□ -1.33
SNX17-206ENST00000484886 CDC42SE1Q9NRR8 79 aa6.61□□□□□ -1.35
SNX17-206ENST00000484886 KRTAP4-3Q9BYR4 195 aa6.6□□□□□ -1.35
SNX17-206ENST00000484886 KRTAP4-9Q9BYQ8 210 aa6.52□□□□□ -1.37
SNX17-206ENST00000484886 KRTAP4-7Q9BYR0 210 aa6.51□□□□□ -1.37
SNX17-206ENST00000484886 KRTAP23-1A1A580 65 aa6.5□□□□□ -1.37
SNX17-206ENST00000484886 ROMO1P60602 79 aa6.5□□□□□ -1.37
SNX17-206ENST00000484886 LCE4AQ5TA78 99 aa6.41□□□□□ -1.38
SNX17-206ENST00000484886 MT4P47944 62 aa6.37□□□□□ -1.39
SNX17-206ENST00000484886 LCE1DQ5T752 114 aa6.37□□□□□ -1.39
SNX17-206ENST00000484886 KRTAP15-1Q3LI76 137 aa6.35□□□□□ -1.39
SNX17-206ENST00000484886 KRTAP19-4Q3LI73 84 aa6.31□□□□□ -1.4
SNX17-206ENST00000484886 KRTAP5-4Q6L8H1 288 aa6.28□□□□□ -1.4
SNX17-206ENST00000484886 HMCN1Q96RW7 5635 aa6.23□□□□□ -1.41
SNX17-206ENST00000484886 LCE3CQ5T5A8 94 aa6.21□□□□□ -1.42
SNX17-206ENST00000484886 GPR98Q8WXG9 6306 aa6.16□□□□□ -1.42
SNX17-206ENST00000484886 LOC100996750A0A140TA64 210 aa6.16□□□□□ -1.42
SNX17-206ENST00000484886 KRTAP4-6Q9BYQ5 205 aa6.16□□□□□ -1.42
SNX17-206ENST00000484886 KRTAP5-5Q701N2 237 aaPredicted RBP6.13□□□□□ -1.43
SNX17-206ENST00000484886 BRK1Q8WUW1 75 aa6.09□□□□□ -1.43
SNX17-206ENST00000484886 KRTAP12-4P60329 112 aa6□□□□□ -1.45
SNX17-206ENST00000484886 KRTAP20-2Q3LI61 65 aa5.96□□□□□ -1.46
SNX17-206ENST00000484886 AHNAK2Q8IVF2 5795 aa5.96□□□□□ -1.46
SNX17-206ENST00000484886 SPRR5A0A1B0GTR4 108 aa5.94□□□□□ -1.46
SNX17-206ENST00000484886 KRTAP9-6A8MVA2 160 aa5.82□□□□□ -1.48
SNX17-206ENST00000484886 SYNE1Q8NF91 8797 aaKnown RBP5.81□□□□□ -1.48
SNX17-206ENST00000484886 MT1AP04731 61 aa5.81□□□□□ -1.48
SNX17-206ENST00000484886 KRTAP5-10Q6L8G5 202 aa5.8□□□□□ -1.48
SNX17-206ENST00000484886 KRTAP6-1Q3LI64 71 aa5.77□□□□□ -1.49
SNX17-206ENST00000484886 KRTAP5-3Q6L8H2 238 aa5.74□□□□□ -1.49
SNX17-206ENST00000484886 PMAIP1Q13794 54 aa5.72□□□□□ -1.49
SNX17-206ENST00000484886 KRTAP9-4Q9BYQ2 154 aa5.59□□□□□ -1.51
SNX17-206ENST00000484886 KRTAP5-7Q6L8G8 165 aa5.54□□□□□ -1.52
SNX17-206ENST00000484886 KRTAP5-2Q701N4 177 aa5.54□□□□□ -1.52
SNX17-206ENST00000484886 KRTAP6-2Q3LI66 62 aa5.49□□□□□ -1.53
SNX17-206ENST00000484886 PRAC1Q96KF2 57 aa5.48□□□□□ -1.53
SNX17-206ENST00000484886 KRTAP4-11Q9BYQ6 195 aa5.4□□□□□ -1.54
SNX17-206ENST00000484886 PRO0628Q9UI54 55 aa5.39□□□□□ -1.55
SNX17-206ENST00000484886 MT3P25713 68 aa5.32□□□□□ -1.56
SNX17-206ENST00000484886 KRTAP5-8O75690 187 aa5.19□□□□□ -1.58
SNX17-206ENST00000484886 KTN1-AS1Q86SY8 53 aa5.14□□□□□ -1.59
SNX17-206ENST00000484886 OBSCNQ5VST9 7968 aa5.1□□□□□ -1.59
SNX17-206ENST00000484886 SVIPQ8NHG7 77 aa5□□□□□ -1.61
SNX17-206ENST00000484886 KRTAP9-9Q9BYP9 154 aa4.95□□□□□ -1.62
SNX17-206ENST00000484886 KRTAP5-1Q6L8H4 278 aa4.93□□□□□ -1.62
SNX17-206ENST00000484886 AHNAKQ09666 5890 aaKnown RBP4.86□□□□□ -1.63
SNX17-206ENST00000484886 MUC5ACP98088 5654 aa4.86□□□□□ -1.63
SNX17-206ENST00000484886 MUC5BQ9HC84 5762 aaPredicted RBP4.85□□□□□ -1.63
SNX17-206ENST00000484886 LCE1EQ5T753 118 aa4.8□□□□□ -1.64
SNX17-206ENST00000484886 LUZP6Q538Z0 58 aa4.64□□□□□ -1.67
SNX17-206ENST00000484886 LCE1BQ5T7P3 118 aa4.59□□□□□ -1.67
SNX17-206ENST00000484886 LCE3DQ9BYE3 92 aa4.53□□□□□ -1.68
SNX17-206ENST00000484886 KRTAP4-2Q9BYR5 136 aa4.51□□□□□ -1.69
SNX17-206ENST00000484886 LCE1CQ5T751 118 aa4.45□□□□□ -1.7
SNX17-206ENST00000484886 LCE3EQ5T5B0 92 aa4.29□□□□□ -1.72
SNX17-206ENST00000484886 KRTAP4-12Q9BQ66 201 aa4.09□□□□□ -1.75
SNX17-206ENST00000484886 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.05□□□□□ -1.76
SNX17-206ENST00000484886 KRTAP5-11Q6L8G4 156 aa4.02□□□□□ -1.77
SNX17-206ENST00000484886 LCE1FQ5T754 118 aa3.86□□□□□ -1.79
SNX17-206ENST00000484886 NDUFAF8A1L188 74 aa3.84□□□□□ -1.79
SNX17-206ENST00000484886 KRTAP21-2Q3LI59 83 aa3.77□□□□□ -1.81
SNX17-206ENST00000484886 KRTAP4-4Q9BYR3 166 aa3.49□□□□□ -1.85
SNX17-206ENST00000484886 PHGR1C9JFL3 82 aa3.47□□□□□ -1.85
SNX17-206ENST00000484886 H3BS24 57 aa3.39□□□□□ -1.87
SNX17-206ENST00000484886 PRM1P04553 51 aa3.34□□□□□ -1.87
SNX17-206ENST00000484886 A0A0A0MQY5 61 aa3.3□□□□□ -1.88
SNX17-206ENST00000484886 MUC19Q7Z5P9 8384 aa3.15□□□□□ -1.91
SNX17-206ENST00000484886 INE1O15225 51 aa3.12□□□□□ -1.91
SNX17-206ENST00000484886 KRTAP21-1Q3LI58 79 aa2.57□□□□□ -2
SNX17-206ENST00000484886 MUC16Q8WXI7 14507 aa2.29□□□□□ -2.04
Retrieved 78 of 20,778 RNA–protein pairs in 75.9 ms