RNA–Protein interactions for RNA: ENST00000484799.1

SMC4-215, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 478 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-215ENST00000484799 MT1MQ8N339 61 aa-1.45□□□□□ -2.64
SMC4-215ENST00000484799 MT2AP02795 61 aa-1.46□□□□□ -2.64
SMC4-215ENST00000484799 VPS13CQ709C8 3753 aa-1.47□□□□□ -2.64
SMC4-215ENST00000484799 FRYLO94915 3013 aa-1.48□□□□□ -2.65
SMC4-215ENST00000484799 SNRPGP15A8MWD9 76 aa-1.49□□□□□ -2.65
SMC4-215ENST00000484799 DEFB4AO15263 64 aa-1.5□□□□□ -2.65
SMC4-215ENST00000484799 FREM2Q5SZK8 3169 aa-1.51□□□□□ -2.65
SMC4-215ENST00000484799 CEP250Q9BV73 2442 aa-1.55□□□□□ -2.66
SMC4-215ENST00000484799 MT1BP07438 61 aa-1.56□□□□□ -2.66
SMC4-215ENST00000484799 MYO15AQ9UKN7 3530 aa-1.59□□□□□ -2.66
SMC4-215ENST00000484799 IQGAP2Q13576 1575 aa-1.64□□□□□ -2.67
SMC4-215ENST00000484799 BOD1L1Q8NFC6 3051 aa-1.66□□□□□ -2.67
SMC4-215ENST00000484799 DMDP11532 3685 aa-1.71□□□□□ -2.68
SMC4-215ENST00000484799 RPS29P62273 56 aaKnown RBP-1.71□□□□□ -2.68
SMC4-215ENST00000484799 PCNTO95613 3336 aa-1.71□□□□□ -2.68
SMC4-215ENST00000484799 WDFY3Q8IZQ1 3526 aa-1.73□□□□□ -2.69
SMC4-215ENST00000484799 TOMM7Q9P0U1 55 aa-1.73□□□□□ -2.69
SMC4-215ENST00000484799 SAMD9LQ8IVG5 1584 aa-1.75□□□□□ -2.69
SMC4-215ENST00000484799 ATP7AQ04656 1500 aa-1.76□□□□□ -2.69
SMC4-215ENST00000484799 TOMM5Q8N4H5 51 aa-1.77□□□□□ -2.69
SMC4-215ENST00000484799 CEP350Q5VT06 3117 aa-1.78□□□□□ -2.69
SMC4-215ENST00000484799 LINC01590Q5TEZ4 76 aa-1.78□□□□□ -2.69
SMC4-215ENST00000484799 SZT2Q5T011 3432 aa-1.79□□□□□ -2.7
SMC4-215ENST00000484799 CENPEQ02224 2701 aa-1.81□□□□□ -2.7
SMC4-215ENST00000484799 WDFY4Q6ZS81 3184 aa-1.81□□□□□ -2.7
SMC4-215ENST00000484799 DUOX1Q9NRD9 1551 aa-1.85□□□□□ -2.71
SMC4-215ENST00000484799 MT1FP04733 61 aa-1.86□□□□□ -2.71
SMC4-215ENST00000484799 DNAH12Q6ZR08 3092 aa-1.86□□□□□ -2.71
SMC4-215ENST00000484799 RHPN1-AS1Q9BWJ2 59 aa-1.87□□□□□ -2.71
SMC4-215ENST00000484799 MUC3AQ02505 3323 aa-1.87□□□□□ -2.71
SMC4-215ENST00000484799 SPEGQ15772 3267 aa-1.89□□□□□ -2.71
SMC4-215ENST00000484799 RPL39P62891 51 aaKnown RBP-1.89□□□□□ -2.71
SMC4-215ENST00000484799 MROH2BQ7Z745 1585 aa-1.97□□□□□ -2.72
SMC4-215ENST00000484799 MKI67P46013 3256 aaKnown RBP-2□□□□□ -2.73
SMC4-215ENST00000484799 RPL39LQ96EH5 51 aaKnown RBP-2.01□□□□□ -2.73
SMC4-215ENST00000484799 TOP2AP11388 1531 aaKnown RBP-2.01□□□□□ -2.73
SMC4-215ENST00000484799 DEFB133Q30KQ1 61 aa-2.03□□□□□ -2.73
SMC4-215ENST00000484799 XIRP2A4UGR9 3374 aa-2.05□□□□□ -2.74
SMC4-215ENST00000484799 EP400Q96L91 3159 aa-2.08□□□□□ -2.74
SMC4-215ENST00000484799 DCHS1Q96JQ0 3298 aa-2.09□□□□□ -2.74
SMC4-215ENST00000484799 A0A096LNI7 61 aa-2.11□□□□□ -2.75
SMC4-215ENST00000484799 HTN1P15515 57 aa-2.13□□□□□ -2.75
SMC4-215ENST00000484799 USP34Q70CQ2 3546 aa-2.13□□□□□ -2.75
SMC4-215ENST00000484799 DEFB124Q8NES8 71 aa-2.15□□□□□ -2.75
SMC4-215ENST00000484799 CD52P31358 61 aa-2.17□□□□□ -2.76
SMC4-215ENST00000484799 TTTY10Q9BZA0 68 aa-2.19□□□□□ -2.76
SMC4-215ENST00000484799 LOC400499M0QZD8 3231 aa-2.19□□□□□ -2.76
SMC4-215ENST00000484799 UNC80Q8N2C7 3258 aa-2.22□□□□□ -2.77
SMC4-215ENST00000484799 CFAP47Q6ZTR5 3102 aa-2.24□□□□□ -2.77
SMC4-215ENST00000484799 DNAH14Q0VDD8 3507 aa-2.3□□□□□ -2.78
SMC4-215ENST00000484799 DEFB104AQ8WTQ1 72 aa-2.3□□□□□ -2.78
SMC4-215ENST00000484799 VCANP13611 3396 aa-2.31□□□□□ -2.78
SMC4-215ENST00000484799 H3BUX3 64 aa-2.32□□□□□ -2.78
SMC4-215ENST00000484799 ASPMQ8IZT6 3477 aa-2.32□□□□□ -2.78
SMC4-215ENST00000484799 GCC2Q8IWJ2 1684 aa-2.33□□□□□ -2.78
SMC4-215ENST00000484799 SNRPGP62308 76 aaKnown RBP-2.39□□□□□ -2.79
SMC4-215ENST00000484799 K7EIM0 57 aa-2.41□□□□□ -2.8
SMC4-215ENST00000484799 KRTAP19-2Q3LHN2 52 aa-2.43□□□□□ -2.8
SMC4-215ENST00000484799 BRCA2P51587 3418 aa-2.48□□□□□ -2.81
SMC4-215ENST00000484799 ARHGAP5-AS1Q96IT6 56 aa-2.54□□□□□ -2.82
SMC4-215ENST00000484799 PRCDQ00LT1 54 aa-2.56□□□□□ -2.82
SMC4-215ENST00000484799 CENPFP49454 3210 aa-2.56□□□□□ -2.82
SMC4-215ENST00000484799 LINC01556Q5JQF7 62 aa-2.6□□□□□ -2.83
SMC4-215ENST00000484799 CDH23Q9H251 3354 aa-2.66□□□□□ -2.84
SMC4-215ENST00000484799 VPS13AQ96RL7 3174 aa-2.73□□□□□ -2.85
SMC4-215ENST00000484799 TMEM167AQ8TBQ9 72 aa-2.76□□□□□ -2.85
SMC4-215ENST00000484799 UTRNP46939 3433 aa-2.83□□□□□ -2.86
SMC4-215ENST00000484799 A0A096LPF7 62 aa-2.91□□□□□ -2.88
SMC4-215ENST00000484799 APELAP0DMC3 54 aa-2.91□□□□□ -2.88
SMC4-215ENST00000484799 RPL39P5Q59GN2 51 aa-2.97□□□□□ -2.88
SMC4-215ENST00000484799 H3BSH0 61 aa-3□□□□□ -2.89
SMC4-215ENST00000484799 GOLGB1Q14789 3259 aaKnown RBP-3.06□□□□□ -2.9
SMC4-215ENST00000484799 DEFB108AA8MXU0 73 aa-3.08□□□□□ -2.9
SMC4-215ENST00000484799 Q9Y3F1 56 aa-3.1□□□□□ -2.91
SMC4-215ENST00000484799 HTN3P15516 51 aa-3.2□□□□□ -2.92
SMC4-215ENST00000484799 COX14Q96I36 57 aa-3.5□□□□□ -2.97
SMC4-215ENST00000484799 DEFB108BQ8NET1 73 aa-3.62□□□□□ -2.99
SMC4-215ENST00000484799 STATHP02808 62 aa-4.13□□□□□ -3.07
Retrieved 78 of 20,778 RNA–protein pairs in 266.7 ms