RNA–Protein interactions for RNA: ENST00000484562.5

PATJ-207, Transcript of PATJ, crumbs cell polarity complex component, humanhuman

TSL 1 (best)

Gene PATJ, Length 5,448 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PATJ-207ENST00000484562 KRTAP4-3Q9BYR4 195 aa3.14□□□□□ -1.91
PATJ-207ENST00000484562 LRP2P98164 4655 aa3.12□□□□□ -1.91
PATJ-207ENST00000484562 KRTAP2-3P0C7H8 128 aa3.1□□□□□ -1.91
PATJ-207ENST00000484562 KRTAP9-2Q9BYQ4 174 aa3.1□□□□□ -1.91
PATJ-207ENST00000484562 KRTAP2-4Q9BYR9 128 aa3.1□□□□□ -1.91
PATJ-207ENST00000484562 KRTAP2-1Q9BYU5 128 aa3.1□□□□□ -1.91
PATJ-207ENST00000484562 KMT2CQ8NEZ4 4911 aaKnown RBP3.1□□□□□ -1.91
PATJ-207ENST00000484562 MUC17Q685J3 4493 aa3.09□□□□□ -1.91
PATJ-207ENST00000484562 KRTAP19-7Q3SYF9 63 aa3.09□□□□□ -1.91
PATJ-207ENST00000484562 SYNE1Q8NF91 8797 aaKnown RBP3.08□□□□□ -1.92
PATJ-207ENST00000484562 FLGP20930 4061 aaPredicted RBP3.08□□□□□ -1.92
PATJ-207ENST00000484562 LCE5AQ5TCM9 118 aa3.07□□□□□ -1.92
PATJ-207ENST00000484562 TNXBP22105 4242 aa3.07□□□□□ -1.92
PATJ-207ENST00000484562 LCE1AQ5T7P2 110 aa3.01□□□□□ -1.93
PATJ-207ENST00000484562 KRTAP4-9Q9BYQ8 210 aa2.99□□□□□ -1.93
PATJ-207ENST00000484562 KRTAP20-1Q3LI63 56 aa2.98□□□□□ -1.93
PATJ-207ENST00000484562 KRTAP9-6A0A140TA67 174 aa2.96□□□□□ -1.94
PATJ-207ENST00000484562 LCE2AQ5TA79 106 aaPredicted RBP2.96□□□□□ -1.94
PATJ-207ENST00000484562 LPAP08519 4548 aa2.93□□□□□ -1.94
PATJ-207ENST00000484562 KRTAP6-2Q3LI66 62 aa2.93□□□□□ -1.94
PATJ-207ENST00000484562 KRTAP9-4Q9BYQ2 154 aa2.93□□□□□ -1.94
PATJ-207ENST00000484562 LCE4AQ5TA78 99 aa2.92□□□□□ -1.94
PATJ-207ENST00000484562 ABCA13Q86UQ4 5058 aa2.92□□□□□ -1.94
PATJ-207ENST00000484562 KRTAP6-3Q3LI67 103 aa2.9□□□□□ -1.95
PATJ-207ENST00000484562 KRTAP6-1Q3LI64 71 aa2.89□□□□□ -1.95
PATJ-207ENST00000484562 RNF213Q63HN8 5207 aa2.85□□□□□ -1.95
PATJ-207ENST00000484562 LCE1CQ5T751 118 aa2.82□□□□□ -1.96
PATJ-207ENST00000484562 LCE1EQ5T753 118 aa2.82□□□□□ -1.96
PATJ-207ENST00000484562 LCE1FQ5T754 118 aa2.82□□□□□ -1.96
PATJ-207ENST00000484562 KRTAP9-7A8MTY7 169 aa2.82□□□□□ -1.96
PATJ-207ENST00000484562 OBSCNQ5VST9 7968 aa2.82□□□□□ -1.96
PATJ-207ENST00000484562 KRTAP9-6A8MVA2 160 aa2.78□□□□□ -1.96
PATJ-207ENST00000484562 KRTAP2-2Q9BYT5 123 aa2.78□□□□□ -1.96
PATJ-207ENST00000484562 FAT4Q6V0I7 4981 aa2.76□□□□□ -1.97
PATJ-207ENST00000484562 SYNE2Q8WXH0 6885 aaKnown RBP2.75□□□□□ -1.97
PATJ-207ENST00000484562 HMCN2Q8NDA2 5059 aa2.75□□□□□ -1.97
PATJ-207ENST00000484562 UBR4Q5T4S7 5183 aa2.74□□□□□ -1.97
PATJ-207ENST00000484562 MUC2Q02817 5179 aa2.7□□□□□ -1.98
PATJ-207ENST00000484562 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.68□□□□□ -1.98
PATJ-207ENST00000484562 FSIP2Q5CZC0 6907 aa2.62□□□□□ -1.99
PATJ-207ENST00000484562 KRTAP9-9Q9BYP9 154 aa2.58□□□□□ -2
PATJ-207ENST00000484562 KRTAP4-11Q9BYQ6 195 aa2.42□□□□□ -2.02
PATJ-207ENST00000484562 USH2AO75445 5202 aa2.41□□□□□ -2.02
PATJ-207ENST00000484562 KRTAP5-9P26371 169 aa2.36□□□□□ -2.03
PATJ-207ENST00000484562 KRTAP20-2Q3LI61 65 aa2.33□□□□□ -2.04
PATJ-207ENST00000484562 FCGBPQ9Y6R7 5405 aaPredicted RBP2.32□□□□□ -2.04
PATJ-207ENST00000484562 MUC12Q9UKN1 5478 aa2.32□□□□□ -2.04
PATJ-207ENST00000484562 NEBP20929 6669 aa2.31□□□□□ -2.04
PATJ-207ENST00000484562 MUC19Q7Z5P9 8384 aa2.3□□□□□ -2.04
PATJ-207ENST00000484562 KMT2DO14686 5537 aa2.3□□□□□ -2.04
PATJ-207ENST00000484562 DSTQ03001 7570 aaKnown RBP2.28□□□□□ -2.04
PATJ-207ENST00000484562 KRTAP4-6Q9BYQ5 205 aa2.28□□□□□ -2.04
PATJ-207ENST00000484562 MACF1Q9UPN3 7388 aaKnown RBP2.26□□□□□ -2.05
PATJ-207ENST00000484562 GPR98Q8WXG9 6306 aa2.19□□□□□ -2.06
PATJ-207ENST00000484562 KRTAP5-4Q6L8H1 288 aa2.18□□□□□ -2.06
PATJ-207ENST00000484562 KRTAP4-4Q9BYR3 166 aa2.17□□□□□ -2.06
PATJ-207ENST00000484562 SSPOA2VEC9 5147 aa2.14□□□□□ -2.07
PATJ-207ENST00000484562 KRTAP4-12Q9BQ66 201 aa2.12□□□□□ -2.07
PATJ-207ENST00000484562 KRTAP4-2Q9BYR5 136 aa2.12□□□□□ -2.07
PATJ-207ENST00000484562 MDN1Q9NU22 5596 aa2.11□□□□□ -2.07
PATJ-207ENST00000484562 KRTAP5-5Q701N2 237 aaPredicted RBP2.09□□□□□ -2.07
PATJ-207ENST00000484562 KRTAP5-3Q6L8H2 238 aa1.9□□□□□ -2.11
PATJ-207ENST00000484562 AHNAK2Q8IVF2 5795 aa1.83□□□□□ -2.12
PATJ-207ENST00000484562 MUC5ACP98088 5654 aa1.79□□□□□ -2.12
PATJ-207ENST00000484562 HMCN1Q96RW7 5635 aa1.72□□□□□ -2.13
PATJ-207ENST00000484562 KRTAP5-10Q6L8G5 202 aa1.71□□□□□ -2.14
PATJ-207ENST00000484562 KRTAP5-8O75690 187 aa1.66□□□□□ -2.14
PATJ-207ENST00000484562 PHGR1C9JFL3 82 aa1.63□□□□□ -2.15
PATJ-207ENST00000484562 MUC5BQ9HC84 5762 aaPredicted RBP1.6□□□□□ -2.15
PATJ-207ENST00000484562 KRTAP5-2Q701N4 177 aa1.59□□□□□ -2.15
PATJ-207ENST00000484562 KRTAP5-11Q6L8G4 156 aa1.55□□□□□ -2.16
PATJ-207ENST00000484562 KRTAP5-1Q6L8H4 278 aa1.49□□□□□ -2.17
PATJ-207ENST00000484562 AHNAKQ09666 5890 aaKnown RBP1.47□□□□□ -2.17
PATJ-207ENST00000484562 KRTAP21-2Q3LI59 83 aa1.39□□□□□ -2.19
PATJ-207ENST00000484562 KRTAP5-7Q6L8G8 165 aa1.39□□□□□ -2.19
PATJ-207ENST00000484562 KRTAP21-1Q3LI58 79 aa1.38□□□□□ -2.19
PATJ-207ENST00000484562 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.32□□□□□ -2.2
PATJ-207ENST00000484562 MUC16Q8WXI7 14507 aa0.95□□□□□ -2.26
Retrieved 78 of 20,778 RNA–protein pairs in 63.3 ms