RNA–Protein interactions for RNA: ENST00000484309.5

MSH5-216, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 857 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-216ENST00000484309 A0A1B0GU69 56 aa4.71□□□□□ -1.66
MSH5-216ENST00000484309 KRTAP12-1P59990 96 aa4.69□□□□□ -1.66
MSH5-216ENST00000484309 H3BS24 57 aa4.66□□□□□ -1.66
MSH5-216ENST00000484309 A8MU10 97 aa4.65□□□□□ -1.67
MSH5-216ENST00000484309 KRTAP2-2Q9BYT5 123 aa4.65□□□□□ -1.67
MSH5-216ENST00000484309 KRTAP2-1Q9BYU5 128 aa4.65□□□□□ -1.67
MSH5-216ENST00000484309 KRTAP5-3Q6L8H2 238 aa4.64□□□□□ -1.67
MSH5-216ENST00000484309 KRTAP19-7Q3SYF9 63 aa4.61□□□□□ -1.67
MSH5-216ENST00000484309 PSPHP1O15172 72 aa4.6□□□□□ -1.67
MSH5-216ENST00000484309 CDC42SE1Q9NRR8 79 aa4.58□□□□□ -1.68
MSH5-216ENST00000484309 MT1EP04732 61 aa4.57□□□□□ -1.68
MSH5-216ENST00000484309 PRR15LQ9BU68 103 aa4.55□□□□□ -1.68
MSH5-216ENST00000484309 A6NED7 52 aa4.53□□□□□ -1.68
MSH5-216ENST00000484309 KRTAP19-5Q3LI72 72 aa4.53□□□□□ -1.68
MSH5-216ENST00000484309 KRTAP19-3Q7Z4W3 81 aa4.52□□□□□ -1.69
MSH5-216ENST00000484309 LINC01558Q9Y6Z2 57 aa4.52□□□□□ -1.69
MSH5-216ENST00000484309 C10orf95Q9H7T3 257 aa4.5□□□□□ -1.69
MSH5-216ENST00000484309 LCE3AQ5TA76 89 aa4.45□□□□□ -1.7
MSH5-216ENST00000484309 TNP1P09430 55 aa4.44□□□□□ -1.7
MSH5-216ENST00000484309 DSTQ03001 7570 aaKnown RBP4.42□□□□□ -1.7
MSH5-216ENST00000484309 UQCR11O14957 56 aa4.4□□□□□ -1.71
MSH5-216ENST00000484309 MT1GP13640 62 aa4.39□□□□□ -1.71
MSH5-216ENST00000484309 MT1LQ93083 61 aa4.38□□□□□ -1.71
MSH5-216ENST00000484309 PP632Q6XCG6 107 aa4.36□□□□□ -1.71
MSH5-216ENST00000484309 MT1MQ8N339 61 aa4.36□□□□□ -1.71
MSH5-216ENST00000484309 MIR22HGQ0VDD5 57 aa4.33□□□□□ -1.72
MSH5-216ENST00000484309 PRAC1Q96KF2 57 aa4.31□□□□□ -1.72
MSH5-216ENST00000484309 KRTAP4-3Q9BYR4 195 aa4.3□□□□□ -1.72
MSH5-216ENST00000484309 KRTAP12-3P60328 96 aa4.25□□□□□ -1.73
MSH5-216ENST00000484309 K7ERS5 55 aa4.21□□□□□ -1.74
MSH5-216ENST00000484309 GPR98Q8WXG9 6306 aa4.19□□□□□ -1.74
MSH5-216ENST00000484309 KRTAP25-1Q3LHN0 102 aa4.19□□□□□ -1.74
MSH5-216ENST00000484309 MT4P47944 62 aa4.18□□□□□ -1.74
MSH5-216ENST00000484309 A0A0A0MQY5 61 aa4.17□□□□□ -1.74
MSH5-216ENST00000484309 ROMO1P60602 79 aa4.16□□□□□ -1.74
MSH5-216ENST00000484309 KRTAP5-4Q6L8H1 288 aa4.1□□□□□ -1.75
MSH5-216ENST00000484309 HMCN1Q96RW7 5635 aa4.1□□□□□ -1.75
MSH5-216ENST00000484309 AHNAK2Q8IVF2 5795 aa3.99□□□□□ -1.77
MSH5-216ENST00000484309 KRTAP23-1A1A580 65 aa3.99□□□□□ -1.77
MSH5-216ENST00000484309 KRTAP15-1Q3LI76 137 aa3.97□□□□□ -1.77
MSH5-216ENST00000484309 KRTAP5-5Q701N2 237 aaPredicted RBP3.97□□□□□ -1.77
MSH5-216ENST00000484309 LCE3CQ5T5A8 94 aa3.91□□□□□ -1.78
MSH5-216ENST00000484309 KRTAP20-2Q3LI61 65 aa3.89□□□□□ -1.79
MSH5-216ENST00000484309 KRTAP5-10Q6L8G5 202 aa3.86□□□□□ -1.79
MSH5-216ENST00000484309 SYNE1Q8NF91 8797 aaKnown RBP3.85□□□□□ -1.79
MSH5-216ENST00000484309 NDUFAF8A1L188 74 aa3.85□□□□□ -1.79
MSH5-216ENST00000484309 KRTAP12-4P60329 112 aa3.85□□□□□ -1.79
MSH5-216ENST00000484309 LUZP6Q538Z0 58 aa3.85□□□□□ -1.79
MSH5-216ENST00000484309 SPRR5A0A1B0GTR4 108 aa3.84□□□□□ -1.79
MSH5-216ENST00000484309 KRTAP9-6A8MVA2 160 aa3.72□□□□□ -1.81
MSH5-216ENST00000484309 MT1AP04731 61 aa3.72□□□□□ -1.81
MSH5-216ENST00000484309 KRTAP6-1Q3LI64 71 aa3.72□□□□□ -1.81
MSH5-216ENST00000484309 KRTAP5-7Q6L8G8 165 aa3.69□□□□□ -1.82
MSH5-216ENST00000484309 KRTAP5-2Q701N4 177 aa3.6□□□□□ -1.83
MSH5-216ENST00000484309 KRTAP6-2Q3LI66 62 aa3.54□□□□□ -1.84
MSH5-216ENST00000484309 KRTAP5-8O75690 187 aa3.42□□□□□ -1.86
MSH5-216ENST00000484309 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.42□□□□□ -1.86
MSH5-216ENST00000484309 MT3P25713 68 aa3.38□□□□□ -1.87
MSH5-216ENST00000484309 OBSCNQ5VST9 7968 aa3.37□□□□□ -1.87
MSH5-216ENST00000484309 KRTAP5-11Q6L8G4 156 aa3.33□□□□□ -1.88
MSH5-216ENST00000484309 INE1O15225 51 aa3.29□□□□□ -1.88
MSH5-216ENST00000484309 MUC5BQ9HC84 5762 aaPredicted RBP3.28□□□□□ -1.88
MSH5-216ENST00000484309 AHNAKQ09666 5890 aaKnown RBP3.25□□□□□ -1.89
MSH5-216ENST00000484309 MUC5ACP98088 5654 aa3.25□□□□□ -1.89
MSH5-216ENST00000484309 KRTAP5-1Q6L8H4 278 aa3.22□□□□□ -1.89
MSH5-216ENST00000484309 LCE1EQ5T753 118 aa3.14□□□□□ -1.91
MSH5-216ENST00000484309 LCE1BQ5T7P3 118 aa2.96□□□□□ -1.94
MSH5-216ENST00000484309 KRTAP4-4Q9BYR3 166 aa2.86□□□□□ -1.95
MSH5-216ENST00000484309 LCE1CQ5T751 118 aa2.85□□□□□ -1.95
MSH5-216ENST00000484309 LCE3DQ9BYE3 92 aa2.82□□□□□ -1.96
MSH5-216ENST00000484309 LCE3EQ5T5B0 92 aa2.66□□□□□ -1.98
MSH5-216ENST00000484309 LCE1FQ5T754 118 aa2.48□□□□□ -2.01
MSH5-216ENST00000484309 KRTAP21-2Q3LI59 83 aa2.43□□□□□ -2.02
MSH5-216ENST00000484309 PHGR1C9JFL3 82 aa2.26□□□□□ -2.05
MSH5-216ENST00000484309 MUC19Q7Z5P9 8384 aa2.1□□□□□ -2.07
MSH5-216ENST00000484309 PRM1P04553 51 aa2.05□□□□□ -2.08
MSH5-216ENST00000484309 KRTAP21-1Q3LI58 79 aa1.68□□□□□ -2.14
MSH5-216ENST00000484309 MUC16Q8WXI7 14507 aa1.48□□□□□ -2.17
Retrieved 78 of 20,778 RNA–protein pairs in 10.3 ms