RNA–Protein interactions for RNA: ENST00000484203.5

PTCD3-215, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 2

Gene PTCD3, Length 928 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-215ENST00000484203 Q1T7F1 81 aa2.57□□□□□ -2
PTCD3-215ENST00000484203 MT1XP80297 61 aa2.56□□□□□ -2
PTCD3-215ENST00000484203 LINC01554Q52M75 96 aa2.56□□□□□ -2
PTCD3-215ENST00000484203 KRTAP20-1Q3LI63 56 aa2.55□□□□□ -2
PTCD3-215ENST00000484203 SPANXA2-OT1Q8N9U9 137 aa2.55□□□□□ -2
PTCD3-215ENST00000484203 KRTAP8-1Q8IUC2 63 aa2.54□□□□□ -2
PTCD3-215ENST00000484203 LCE3AQ5TA76 89 aa2.53□□□□□ -2
PTCD3-215ENST00000484203 SPRR2FQ96RM1 72 aa2.53□□□□□ -2
PTCD3-215ENST00000484203 KRTAP2-3P0C7H8 128 aa2.5□□□□□ -2.01
PTCD3-215ENST00000484203 PMAIP1Q13794 54 aa2.5□□□□□ -2.01
PTCD3-215ENST00000484203 KRTAP2-4Q9BYR9 128 aa2.5□□□□□ -2.01
PTCD3-215ENST00000484203 PSPHP1O15172 72 aa2.49□□□□□ -2.01
PTCD3-215ENST00000484203 SPRR2EP22531 72 aa2.49□□□□□ -2.01
PTCD3-215ENST00000484203 SPRR2BP35325 72 aa2.49□□□□□ -2.01
PTCD3-215ENST00000484203 SPRR2AP35326 72 aa2.49□□□□□ -2.01
PTCD3-215ENST00000484203 CAMK2N1Q7Z7J9 78 aa2.45□□□□□ -2.02
PTCD3-215ENST00000484203 KTN1-AS1Q86SY8 53 aa2.45□□□□□ -2.02
PTCD3-215ENST00000484203 COA5Q86WW8 74 aa2.45□□□□□ -2.02
PTCD3-215ENST00000484203 PRR15LQ9BU68 103 aa2.45□□□□□ -2.02
PTCD3-215ENST00000484203 CDC42SE1Q9NRR8 79 aa2.43□□□□□ -2.02
PTCD3-215ENST00000484203 LINC01558Q9Y6Z2 57 aa2.43□□□□□ -2.02
PTCD3-215ENST00000484203 SPRR2DP22532 72 aa2.42□□□□□ -2.02
PTCD3-215ENST00000484203 KRTAP2-1Q9BYU5 128 aa2.42□□□□□ -2.02
PTCD3-215ENST00000484203 A6NED7 52 aa2.4□□□□□ -2.03
PTCD3-215ENST00000484203 A0A1B0GU33 70 aa2.39□□□□□ -2.03
PTCD3-215ENST00000484203 KRTAP5-2Q701N4 177 aa2.38□□□□□ -2.03
PTCD3-215ENST00000484203 KRTAP13-4Q3LI77 160 aa2.37□□□□□ -2.03
PTCD3-215ENST00000484203 A0A0D9SG42 100 aa2.35□□□□□ -2.03
PTCD3-215ENST00000484203 A0A1B0GU69 56 aa2.34□□□□□ -2.03
PTCD3-215ENST00000484203 SPINT4Q6UDR6 99 aa2.34□□□□□ -2.03
PTCD3-215ENST00000484203 SPATA8Q6RVD6 105 aa2.33□□□□□ -2.04
PTCD3-215ENST00000484203 KRTAP12-1P59990 96 aa2.3□□□□□ -2.04
PTCD3-215ENST00000484203 KRTAP5-5Q701N2 237 aaPredicted RBP2.3□□□□□ -2.04
PTCD3-215ENST00000484203 KRTAP19-3Q7Z4W3 81 aa2.29□□□□□ -2.04
PTCD3-215ENST00000484203 DSTQ03001 7570 aaKnown RBP2.29□□□□□ -2.04
PTCD3-215ENST00000484203 MT1EP04732 61 aa2.28□□□□□ -2.04
PTCD3-215ENST00000484203 KRTAP19-7Q3SYF9 63 aa2.28□□□□□ -2.04
PTCD3-215ENST00000484203 PP632Q6XCG6 107 aa2.28□□□□□ -2.04
PTCD3-215ENST00000484203 TNP1P09430 55 aa2.26□□□□□ -2.05
PTCD3-215ENST00000484203 MT1GP13640 62 aa2.26□□□□□ -2.05
PTCD3-215ENST00000484203 MIR22HGQ0VDD5 57 aa2.26□□□□□ -2.05
PTCD3-215ENST00000484203 GPR98Q8WXG9 6306 aa2.26□□□□□ -2.05
PTCD3-215ENST00000484203 UQCR11O14957 56 aa2.25□□□□□ -2.05
PTCD3-215ENST00000484203 LCE3DQ9BYE3 92 aa2.25□□□□□ -2.05
PTCD3-215ENST00000484203 KRTAP19-5Q3LI72 72 aa2.23□□□□□ -2.05
PTCD3-215ENST00000484203 LCE1CQ5T751 118 aa2.23□□□□□ -2.05
PTCD3-215ENST00000484203 LCE1BQ5T7P3 118 aa2.23□□□□□ -2.05
PTCD3-215ENST00000484203 C10orf95Q9H7T3 257 aa2.22□□□□□ -2.05
PTCD3-215ENST00000484203 K7ERS5 55 aa2.18□□□□□ -2.06
PTCD3-215ENST00000484203 MT1LQ93083 61 aa2.18□□□□□ -2.06
PTCD3-215ENST00000484203 HMCN1Q96RW7 5635 aa2.17□□□□□ -2.06
PTCD3-215ENST00000484203 KRTAP25-1Q3LHN0 102 aa2.17□□□□□ -2.06
PTCD3-215ENST00000484203 MT1MQ8N339 61 aa2.16□□□□□ -2.06
PTCD3-215ENST00000484203 KRTAP12-3P60328 96 aa2.14□□□□□ -2.07
PTCD3-215ENST00000484203 ROMO1P60602 79 aa2.12□□□□□ -2.07
PTCD3-215ENST00000484203 SPRR5A0A1B0GTR4 108 aa2.1□□□□□ -2.07
PTCD3-215ENST00000484203 MT4P47944 62 aa2.08□□□□□ -2.08
PTCD3-215ENST00000484203 AHNAK2Q8IVF2 5795 aa2.08□□□□□ -2.08
PTCD3-215ENST00000484203 LUZP6Q538Z0 58 aa2.03□□□□□ -2.08
PTCD3-215ENST00000484203 KRTAP12-4P60329 112 aa2.02□□□□□ -2.09
PTCD3-215ENST00000484203 KRTAP5-8O75690 187 aa2□□□□□ -2.09
PTCD3-215ENST00000484203 KRTAP5-10Q6L8G5 202 aa1.98□□□□□ -2.09
PTCD3-215ENST00000484203 KRTAP20-2Q3LI61 65 aa1.96□□□□□ -2.1
PTCD3-215ENST00000484203 KRTAP5-7Q6L8G8 165 aa1.93□□□□□ -2.1
PTCD3-215ENST00000484203 SYNE1Q8NF91 8797 aaKnown RBP1.93□□□□□ -2.1
PTCD3-215ENST00000484203 MT1AP04731 61 aa1.87□□□□□ -2.11
PTCD3-215ENST00000484203 MUC19Q7Z5P9 8384 aa1.84□□□□□ -2.11
PTCD3-215ENST00000484203 KRTAP6-1Q3LI64 71 aa1.82□□□□□ -2.12
PTCD3-215ENST00000484203 AHNAKQ09666 5890 aaKnown RBP1.8□□□□□ -2.12
PTCD3-215ENST00000484203 MUC5BQ9HC84 5762 aaPredicted RBP1.77□□□□□ -2.13
PTCD3-215ENST00000484203 KRTAP6-2Q3LI66 62 aa1.76□□□□□ -2.13
PTCD3-215ENST00000484203 MUC5ACP98088 5654 aa1.75□□□□□ -2.13
PTCD3-215ENST00000484203 INE1O15225 51 aa1.63□□□□□ -2.15
PTCD3-215ENST00000484203 KRTAP21-2Q3LI59 83 aa1.58□□□□□ -2.16
PTCD3-215ENST00000484203 PHGR1C9JFL3 82 aa1.16□□□□□ -2.22
PTCD3-215ENST00000484203 PRM1P04553 51 aa1.11□□□□□ -2.23
PTCD3-215ENST00000484203 KRTAP21-1Q3LI58 79 aa0.93□□□□□ -2.26
PTCD3-215ENST00000484203 MUC16Q8WXI7 14507 aa0.77□□□□□ -2.29
Retrieved 78 of 20,778 RNA–protein pairs in 62.7 ms