RNA–Protein interactions for RNA: ENST00000483564.5

GABRE-208, Transcript of gamma-aminobutyric acid type A receptor epsilon subunit, humanhuman

TSL 3

Gene GABRE, Length 2,747 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRE-208ENST00000483564 KRTAP19-6Q3LI70 58 aa3.12□□□□□ -1.91
GABRE-208ENST00000483564 KRTAP9-6A0A140TA67 174 aa3.12□□□□□ -1.91
GABRE-208ENST00000483564 KRTAP19-7Q3SYF9 63 aa3.11□□□□□ -1.91
GABRE-208ENST00000483564 KRTAP12-4P60329 112 aa3.1□□□□□ -1.91
GABRE-208ENST00000483564 SSPOA2VEC9 5147 aa3.06□□□□□ -1.92
GABRE-208ENST00000483564 MT1LQ93083 61 aa3.02□□□□□ -1.93
GABRE-208ENST00000483564 LCE3BQ5TA77 95 aa3.01□□□□□ -1.93
GABRE-208ENST00000483564 KRTAP4-12Q9BQ66 201 aa2.99□□□□□ -1.93
GABRE-208ENST00000483564 KRTAP9-9Q9BYP9 154 aa2.98□□□□□ -1.93
GABRE-208ENST00000483564 KRTAP9-4Q9BYQ2 154 aa2.98□□□□□ -1.93
GABRE-208ENST00000483564 KRTAP4-3Q9BYR4 195 aa2.98□□□□□ -1.93
GABRE-208ENST00000483564 MT1EP04732 61 aa2.97□□□□□ -1.93
GABRE-208ENST00000483564 FCGBPQ9Y6R7 5405 aaPredicted RBP2.96□□□□□ -1.94
GABRE-208ENST00000483564 KRTAP19-4Q3LI73 84 aa2.94□□□□□ -1.94
GABRE-208ENST00000483564 DSTQ03001 7570 aaKnown RBP2.94□□□□□ -1.94
GABRE-208ENST00000483564 MT1GP13640 62 aa2.93□□□□□ -1.94
GABRE-208ENST00000483564 CRCT1Q9UGL9 99 aa2.93□□□□□ -1.94
GABRE-208ENST00000483564 MUC12Q9UKN1 5478 aa2.9□□□□□ -1.94
GABRE-208ENST00000483564 SYNE1Q8NF91 8797 aaKnown RBP2.9□□□□□ -1.95
GABRE-208ENST00000483564 KRTAP4-9Q9BYQ8 210 aa2.86□□□□□ -1.95
GABRE-208ENST00000483564 KRTAP6-3Q3LI67 103 aa2.84□□□□□ -1.95
GABRE-208ENST00000483564 LCE1AQ5T7P2 110 aa2.83□□□□□ -1.96
GABRE-208ENST00000483564 KRTAP9-7A8MTY7 169 aa2.83□□□□□ -1.96
GABRE-208ENST00000483564 PRM1P04553 51 aa2.82□□□□□ -1.96
GABRE-208ENST00000483564 LCE1DQ5T752 114 aa2.8□□□□□ -1.96
GABRE-208ENST00000483564 KRTAP2-2Q9BYT5 123 aa2.8□□□□□ -1.96
GABRE-208ENST00000483564 MACF1Q9UPN3 7388 aaKnown RBP2.79□□□□□ -1.96
GABRE-208ENST00000483564 OBSCNQ5VST9 7968 aa2.76□□□□□ -1.97
GABRE-208ENST00000483564 MT1MQ8N339 61 aa2.76□□□□□ -1.97
GABRE-208ENST00000483564 SPRR2FQ96RM1 72 aa2.76□□□□□ -1.97
GABRE-208ENST00000483564 KRTAP19-3Q7Z4W3 81 aa2.74□□□□□ -1.97
GABRE-208ENST00000483564 KRTAP5-9P26371 169 aa2.73□□□□□ -1.97
GABRE-208ENST00000483564 KRTAP4-2Q9BYR5 136 aa2.73□□□□□ -1.97
GABRE-208ENST00000483564 LCE1EQ5T753 118 aa2.7□□□□□ -1.98
GABRE-208ENST00000483564 KRTAP5-5Q701N2 237 aaPredicted RBP2.7□□□□□ -1.98
GABRE-208ENST00000483564 LCE5AQ5TCM9 118 aa2.68□□□□□ -1.98
GABRE-208ENST00000483564 SYNE2Q8WXH0 6885 aaKnown RBP2.68□□□□□ -1.98
GABRE-208ENST00000483564 LCE4AQ5TA78 99 aa2.66□□□□□ -1.98
GABRE-208ENST00000483564 LCE3DQ9BYE3 92 aa2.65□□□□□ -1.98
GABRE-208ENST00000483564 LCE3EQ5T5B0 92 aa2.64□□□□□ -1.99
GABRE-208ENST00000483564 KRTAP4-11Q9BYQ6 195 aa2.63□□□□□ -1.99
GABRE-208ENST00000483564 MT1AP04731 61 aa2.62□□□□□ -1.99
GABRE-208ENST00000483564 KRTAP6-1Q3LI64 71 aa2.62□□□□□ -1.99
GABRE-208ENST00000483564 SPRR2EP22531 72 aa2.61□□□□□ -1.99
GABRE-208ENST00000483564 SPRR2BP35325 72 aa2.61□□□□□ -1.99
GABRE-208ENST00000483564 SPRR2AP35326 72 aa2.61□□□□□ -1.99
GABRE-208ENST00000483564 KRTAP6-2Q3LI66 62 aa2.55□□□□□ -2
GABRE-208ENST00000483564 MDN1Q9NU22 5596 aa2.52□□□□□ -2.01
GABRE-208ENST00000483564 SPRR2DP22532 72 aa2.52□□□□□ -2.01
GABRE-208ENST00000483564 KRTAP5-3Q6L8H2 238 aa2.5□□□□□ -2.01
GABRE-208ENST00000483564 NEBP20929 6669 aa2.45□□□□□ -2.02
GABRE-208ENST00000483564 KRTAP20-1Q3LI63 56 aa2.38□□□□□ -2.03
GABRE-208ENST00000483564 LCE1FQ5T754 118 aa2.29□□□□□ -2.04
GABRE-208ENST00000483564 KRTAP5-4Q6L8H1 288 aa2.29□□□□□ -2.04
GABRE-208ENST00000483564 MUC19Q7Z5P9 8384 aa2.21□□□□□ -2.06
GABRE-208ENST00000483564 MT3P25713 68 aa2.21□□□□□ -2.06
GABRE-208ENST00000483564 MT4P47944 62 aa2.16□□□□□ -2.06
GABRE-208ENST00000483564 GPR98Q8WXG9 6306 aa2.14□□□□□ -2.07
GABRE-208ENST00000483564 KRTAP20-2Q3LI61 65 aa2.13□□□□□ -2.07
GABRE-208ENST00000483564 KRTAP5-2Q701N4 177 aa2.09□□□□□ -2.08
GABRE-208ENST00000483564 HMCN1Q96RW7 5635 aa2.05□□□□□ -2.08
GABRE-208ENST00000483564 MUC5ACP98088 5654 aa2.04□□□□□ -2.08
GABRE-208ENST00000483564 KRTAP5-7Q6L8G8 165 aa1.91□□□□□ -2.1
GABRE-208ENST00000483564 AHNAK2Q8IVF2 5795 aa1.9□□□□□ -2.1
GABRE-208ENST00000483564 KRTAP5-10Q6L8G5 202 aa1.9□□□□□ -2.11
GABRE-208ENST00000483564 LCE1BQ5T7P3 118 aa1.85□□□□□ -2.11
GABRE-208ENST00000483564 MUC5BQ9HC84 5762 aaPredicted RBP1.85□□□□□ -2.11
GABRE-208ENST00000483564 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.84□□□□□ -2.11
GABRE-208ENST00000483564 AHNAKQ09666 5890 aaKnown RBP1.81□□□□□ -2.12
GABRE-208ENST00000483564 LCE1CQ5T751 118 aa1.8□□□□□ -2.12
GABRE-208ENST00000483564 KRTAP5-11Q6L8G4 156 aa1.8□□□□□ -2.12
GABRE-208ENST00000483564 KRTAP5-1Q6L8H4 278 aa1.78□□□□□ -2.12
GABRE-208ENST00000483564 KRTAP5-8O75690 187 aa1.76□□□□□ -2.13
GABRE-208ENST00000483564 KRTAP21-1Q3LI58 79 aa1.75□□□□□ -2.13
GABRE-208ENST00000483564 KRTAP21-2Q3LI59 83 aa1.65□□□□□ -2.15
GABRE-208ENST00000483564 KRTAP4-4Q9BYR3 166 aa1.64□□□□□ -2.15
GABRE-208ENST00000483564 PHGR1C9JFL3 82 aa1.31□□□□□ -2.2
GABRE-208ENST00000483564 MUC16Q8WXI7 14507 aa0.91□□□□□ -2.26
Retrieved 78 of 20,778 RNA–protein pairs in 67.6 ms