RNA–Protein interactions for RNA: ENST00000482902.5

SSR4-209, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2

Gene SSR4, Length 2,409 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-209ENST00000482902 KRTAP19-6Q3LI70 58 aa6.08□□□□□ -1.44
SSR4-209ENST00000482902 KRTAP9-2Q9BYQ4 174 aa5.93□□□□□ -1.46
SSR4-209ENST00000482902 KRTAP4-3Q9BYR4 195 aa5.88□□□□□ -1.47
SSR4-209ENST00000482902 LCE2DQ5TA82 110 aaPredicted RBP5.86□□□□□ -1.47
SSR4-209ENST00000482902 LOC100996750A0A140TA64 210 aa5.85□□□□□ -1.47
SSR4-209ENST00000482902 FCGBPQ9Y6R7 5405 aaPredicted RBP5.85□□□□□ -1.47
SSR4-209ENST00000482902 MT1GP13640 62 aa5.8□□□□□ -1.48
SSR4-209ENST00000482902 KRTAP19-3Q7Z4W3 81 aa5.8□□□□□ -1.48
SSR4-209ENST00000482902 MT1MQ8N339 61 aa5.79□□□□□ -1.48
SSR4-209ENST00000482902 MUC12Q9UKN1 5478 aa5.79□□□□□ -1.48
SSR4-209ENST00000482902 KRTAP12-4P60329 112 aa5.71□□□□□ -1.5
SSR4-209ENST00000482902 CRCT1Q9UGL9 99 aa5.68□□□□□ -1.5
SSR4-209ENST00000482902 MACF1Q9UPN3 7388 aaKnown RBP5.6□□□□□ -1.51
SSR4-209ENST00000482902 LCE5AQ5TCM9 118 aa5.59□□□□□ -1.51
SSR4-209ENST00000482902 SPRR2FQ96RM1 72 aa5.58□□□□□ -1.52
SSR4-209ENST00000482902 SYNE2Q8WXH0 6885 aaKnown RBP5.53□□□□□ -1.52
SSR4-209ENST00000482902 DSTQ03001 7570 aaKnown RBP5.49□□□□□ -1.53
SSR4-209ENST00000482902 KRTAP9-6A0A140TA67 174 aa5.48□□□□□ -1.53
SSR4-209ENST00000482902 LCE3BQ5TA77 95 aa5.37□□□□□ -1.55
SSR4-209ENST00000482902 KRTAP4-9Q9BYQ8 210 aa5.33□□□□□ -1.56
SSR4-209ENST00000482902 KRTAP6-1Q3LI64 71 aa5.27□□□□□ -1.57
SSR4-209ENST00000482902 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.25□□□□□ -1.57
SSR4-209ENST00000482902 MT1AP04731 61 aa5.25□□□□□ -1.57
SSR4-209ENST00000482902 MDN1Q9NU22 5596 aa5.25□□□□□ -1.57
SSR4-209ENST00000482902 LCE1AQ5T7P2 110 aa5.19□□□□□ -1.58
SSR4-209ENST00000482902 KRTAP9-7A8MTY7 169 aa5.16□□□□□ -1.58
SSR4-209ENST00000482902 KRTAP5-5Q701N2 237 aaPredicted RBP5.15□□□□□ -1.58
SSR4-209ENST00000482902 KRTAP5-9P26371 169 aa5.15□□□□□ -1.59
SSR4-209ENST00000482902 SYNE1Q8NF91 8797 aaKnown RBP5.15□□□□□ -1.59
SSR4-209ENST00000482902 LCE3DQ9BYE3 92 aa5.14□□□□□ -1.59
SSR4-209ENST00000482902 PRM1P04553 51 aa5.12□□□□□ -1.59
SSR4-209ENST00000482902 LCE3EQ5T5B0 92 aa5.11□□□□□ -1.59
SSR4-209ENST00000482902 SPRR2EP22531 72 aa5.07□□□□□ -1.6
SSR4-209ENST00000482902 SPRR2BP35325 72 aa5.07□□□□□ -1.6
SSR4-209ENST00000482902 SPRR2AP35326 72 aa5.07□□□□□ -1.6
SSR4-209ENST00000482902 KRTAP6-3Q3LI67 103 aa4.93□□□□□ -1.62
SSR4-209ENST00000482902 KRTAP9-4Q9BYQ2 154 aa4.91□□□□□ -1.62
SSR4-209ENST00000482902 NEBP20929 6669 aa4.85□□□□□ -1.63
SSR4-209ENST00000482902 SPRR2DP22532 72 aa4.85□□□□□ -1.63
SSR4-209ENST00000482902 KRTAP6-2Q3LI66 62 aa4.84□□□□□ -1.64
SSR4-209ENST00000482902 MT3P25713 68 aa4.68□□□□□ -1.66
SSR4-209ENST00000482902 KRTAP2-2Q9BYT5 123 aa4.58□□□□□ -1.68
SSR4-209ENST00000482902 OBSCNQ5VST9 7968 aa4.53□□□□□ -1.68
SSR4-209ENST00000482902 KRTAP5-4Q6L8H1 288 aa4.47□□□□□ -1.69
SSR4-209ENST00000482902 KRTAP20-1Q3LI63 56 aa4.37□□□□□ -1.71
SSR4-209ENST00000482902 KRTAP4-6Q9BYQ5 205 aa4.33□□□□□ -1.72
SSR4-209ENST00000482902 MT4P47944 62 aa4.28□□□□□ -1.72
SSR4-209ENST00000482902 KRTAP20-2Q3LI61 65 aa4.21□□□□□ -1.74
SSR4-209ENST00000482902 KRTAP5-2Q701N4 177 aa4.19□□□□□ -1.74
SSR4-209ENST00000482902 LCE4AQ5TA78 99 aa4.18□□□□□ -1.74
SSR4-209ENST00000482902 HMCN1Q96RW7 5635 aa4.11□□□□□ -1.75
SSR4-209ENST00000482902 LCE1EQ5T753 118 aa4.11□□□□□ -1.75
SSR4-209ENST00000482902 LCE1DQ5T752 114 aa4.07□□□□□ -1.76
SSR4-209ENST00000482902 KRTAP5-3Q6L8H2 238 aa4□□□□□ -1.77
SSR4-209ENST00000482902 MUC5ACP98088 5654 aa3.96□□□□□ -1.78
SSR4-209ENST00000482902 KRTAP4-11Q9BYQ6 195 aa3.83□□□□□ -1.8
SSR4-209ENST00000482902 LCE1BQ5T7P3 118 aa3.79□□□□□ -1.8
SSR4-209ENST00000482902 KRTAP5-10Q6L8G5 202 aa3.73□□□□□ -1.81
SSR4-209ENST00000482902 AHNAK2Q8IVF2 5795 aa3.68□□□□□ -1.82
SSR4-209ENST00000482902 KRTAP5-1Q6L8H4 278 aa3.65□□□□□ -1.83
SSR4-209ENST00000482902 KRTAP4-2Q9BYR5 136 aa3.62□□□□□ -1.83
SSR4-209ENST00000482902 LCE1CQ5T751 118 aa3.6□□□□□ -1.83
SSR4-209ENST00000482902 GPR98Q8WXG9 6306 aa3.47□□□□□ -1.85
SSR4-209ENST00000482902 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.4□□□□□ -1.87
SSR4-209ENST00000482902 KRTAP21-2Q3LI59 83 aa3.39□□□□□ -1.87
SSR4-209ENST00000482902 LCE1FQ5T754 118 aa3.34□□□□□ -1.87
SSR4-209ENST00000482902 KRTAP5-8O75690 187 aa3.32□□□□□ -1.88
SSR4-209ENST00000482902 KRTAP21-1Q3LI58 79 aa3.29□□□□□ -1.88
SSR4-209ENST00000482902 KRTAP5-7Q6L8G8 165 aa3.26□□□□□ -1.89
SSR4-209ENST00000482902 KRTAP4-4Q9BYR3 166 aa3.12□□□□□ -1.91
SSR4-209ENST00000482902 MUC5BQ9HC84 5762 aaPredicted RBP3.09□□□□□ -1.92
SSR4-209ENST00000482902 KRTAP5-11Q6L8G4 156 aa3.09□□□□□ -1.92
SSR4-209ENST00000482902 MUC19Q7Z5P9 8384 aa3.02□□□□□ -1.93
SSR4-209ENST00000482902 KRTAP9-9Q9BYP9 154 aa2.94□□□□□ -1.94
SSR4-209ENST00000482902 KRTAP4-12Q9BQ66 201 aa2.93□□□□□ -1.94
SSR4-209ENST00000482902 AHNAKQ09666 5890 aaKnown RBP2.76□□□□□ -1.97
SSR4-209ENST00000482902 PHGR1C9JFL3 82 aa2.67□□□□□ -1.98
SSR4-209ENST00000482902 MUC16Q8WXI7 14507 aa1.78□□□□□ -2.12
Retrieved 78 of 20,778 RNA–protein pairs in 81.4 ms