RNA–Protein interactions for RNA: ENST00000482310.5

HDAC1-208, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-208ENST00000482310 KRTAP2-4Q9BYR9 128 aa5.16□□□□□ -1.58
HDAC1-208ENST00000482310 KRTAP4-11Q9BYQ6 195 aa5.15□□□□□ -1.59
HDAC1-208ENST00000482310 KRTAP4-2Q9BYR5 136 aa5.15□□□□□ -1.59
HDAC1-208ENST00000482310 TNP1P09430 55 aa5.13□□□□□ -1.59
HDAC1-208ENST00000482310 SPRR2FQ96RM1 72 aa5.11□□□□□ -1.59
HDAC1-208ENST00000482310 BRK1Q8WUW1 75 aa5.09□□□□□ -1.59
HDAC1-208ENST00000482310 SPRR2EP22531 72 aa5.04□□□□□ -1.6
HDAC1-208ENST00000482310 SPRR2BP35325 72 aa5.04□□□□□ -1.6
HDAC1-208ENST00000482310 SPRR2AP35326 72 aa5.04□□□□□ -1.6
HDAC1-208ENST00000482310 LCE3AQ5TA76 89 aa5.02□□□□□ -1.61
HDAC1-208ENST00000482310 ROMO1P60602 79 aa4.99□□□□□ -1.61
HDAC1-208ENST00000482310 KRTAP25-1Q3LHN0 102 aa4.99□□□□□ -1.61
HDAC1-208ENST00000482310 LCE1AQ5T7P2 110 aa4.99□□□□□ -1.61
HDAC1-208ENST00000482310 KRTAP2-2Q9BYT5 123 aa4.98□□□□□ -1.61
HDAC1-208ENST00000482310 KRTAP2-1Q9BYU5 128 aa4.98□□□□□ -1.61
HDAC1-208ENST00000482310 KRTAP19-5Q3LI72 72 aa4.95□□□□□ -1.62
HDAC1-208ENST00000482310 KRTAP19-7Q3SYF9 63 aa4.93□□□□□ -1.62
HDAC1-208ENST00000482310 MT1EP04732 61 aa4.88□□□□□ -1.63
HDAC1-208ENST00000482310 SPRR2DP22532 72 aa4.87□□□□□ -1.63
HDAC1-208ENST00000482310 KRTAP12-3P60328 96 aa4.8□□□□□ -1.64
HDAC1-208ENST00000482310 KRTAP23-1A1A580 65 aa4.78□□□□□ -1.64
HDAC1-208ENST00000482310 PMAIP1Q13794 54 aa4.77□□□□□ -1.65
HDAC1-208ENST00000482310 KRTAP19-3Q7Z4W3 81 aa4.76□□□□□ -1.65
HDAC1-208ENST00000482310 MT1LQ93083 61 aa4.73□□□□□ -1.65
HDAC1-208ENST00000482310 PP632Q6XCG6 107 aa4.7□□□□□ -1.66
HDAC1-208ENST00000482310 PRO0628Q9UI54 55 aa4.7□□□□□ -1.66
HDAC1-208ENST00000482310 GPR98Q8WXG9 6306 aa4.69□□□□□ -1.66
HDAC1-208ENST00000482310 MT1GP13640 62 aa4.65□□□□□ -1.67
HDAC1-208ENST00000482310 MT1MQ8N339 61 aa4.63□□□□□ -1.67
HDAC1-208ENST00000482310 DSTQ03001 7570 aaKnown RBP4.62□□□□□ -1.67
HDAC1-208ENST00000482310 KRTAP15-1Q3LI76 137 aa4.59□□□□□ -1.67
HDAC1-208ENST00000482310 PRAC1Q96KF2 57 aa4.58□□□□□ -1.68
HDAC1-208ENST00000482310 KRTAP4-3Q9BYR4 195 aa4.57□□□□□ -1.68
HDAC1-208ENST00000482310 KRTAP5-3Q6L8H2 238 aa4.47□□□□□ -1.69
HDAC1-208ENST00000482310 LCE3CQ5T5A8 94 aa4.44□□□□□ -1.7
HDAC1-208ENST00000482310 KTN1-AS1Q86SY8 53 aa4.43□□□□□ -1.7
HDAC1-208ENST00000482310 HMCN1Q96RW7 5635 aa4.32□□□□□ -1.72
HDAC1-208ENST00000482310 MT4P47944 62 aa4.32□□□□□ -1.72
HDAC1-208ENST00000482310 KRTAP5-10Q6L8G5 202 aa4.29□□□□□ -1.72
HDAC1-208ENST00000482310 AHNAK2Q8IVF2 5795 aa4.28□□□□□ -1.72
HDAC1-208ENST00000482310 KRTAP5-4Q6L8H1 288 aa4.21□□□□□ -1.74
HDAC1-208ENST00000482310 KRTAP9-6A8MVA2 160 aa4.2□□□□□ -1.74
HDAC1-208ENST00000482310 KRTAP5-5Q701N2 237 aaPredicted RBP4.16□□□□□ -1.74
HDAC1-208ENST00000482310 KRTAP5-7Q6L8G8 165 aa4.13□□□□□ -1.75
HDAC1-208ENST00000482310 MT1AP04731 61 aa4.01□□□□□ -1.77
HDAC1-208ENST00000482310 KRTAP6-1Q3LI64 71 aa4.01□□□□□ -1.77
HDAC1-208ENST00000482310 SPRR5A0A1B0GTR4 108 aa3.99□□□□□ -1.77
HDAC1-208ENST00000482310 KRTAP12-4P60329 112 aa3.99□□□□□ -1.77
HDAC1-208ENST00000482310 KRTAP20-2Q3LI61 65 aa3.98□□□□□ -1.77
HDAC1-208ENST00000482310 SYNE1Q8NF91 8797 aaKnown RBP3.95□□□□□ -1.78
HDAC1-208ENST00000482310 KRTAP6-2Q3LI66 62 aa3.76□□□□□ -1.81
HDAC1-208ENST00000482310 LUZP6Q538Z0 58 aa3.74□□□□□ -1.81
HDAC1-208ENST00000482310 KRTAP5-2Q701N4 177 aa3.69□□□□□ -1.82
HDAC1-208ENST00000482310 A0A0A0MQY5 61 aa3.67□□□□□ -1.82
HDAC1-208ENST00000482310 MT3P25713 68 aa3.64□□□□□ -1.83
HDAC1-208ENST00000482310 KRTAP5-8O75690 187 aa3.62□□□□□ -1.83
HDAC1-208ENST00000482310 MUC5ACP98088 5654 aa3.57□□□□□ -1.84
HDAC1-208ENST00000482310 AHNAKQ09666 5890 aaKnown RBP3.55□□□□□ -1.84
HDAC1-208ENST00000482310 MUC5BQ9HC84 5762 aaPredicted RBP3.54□□□□□ -1.84
HDAC1-208ENST00000482310 OBSCNQ5VST9 7968 aa3.47□□□□□ -1.85
HDAC1-208ENST00000482310 KRTAP5-11Q6L8G4 156 aa3.46□□□□□ -1.86
HDAC1-208ENST00000482310 LCE1EQ5T753 118 aa3.43□□□□□ -1.86
HDAC1-208ENST00000482310 NDUFAF8A1L188 74 aa3.41□□□□□ -1.86
HDAC1-208ENST00000482310 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.41□□□□□ -1.86
HDAC1-208ENST00000482310 KRTAP5-1Q6L8H4 278 aa3.34□□□□□ -1.87
HDAC1-208ENST00000482310 LCE3DQ9BYE3 92 aa3.28□□□□□ -1.88
HDAC1-208ENST00000482310 LCE1FQ5T754 118 aa3.15□□□□□ -1.91
HDAC1-208ENST00000482310 LCE3EQ5T5B0 92 aa3.14□□□□□ -1.91
HDAC1-208ENST00000482310 LCE1BQ5T7P3 118 aa3.12□□□□□ -1.91
HDAC1-208ENST00000482310 LCE1CQ5T751 118 aa2.99□□□□□ -1.93
HDAC1-208ENST00000482310 INE1O15225 51 aa2.85□□□□□ -1.95
HDAC1-208ENST00000482310 KRTAP4-4Q9BYR3 166 aa2.83□□□□□ -1.96
HDAC1-208ENST00000482310 PRM1P04553 51 aa2.62□□□□□ -1.99
HDAC1-208ENST00000482310 KRTAP21-2Q3LI59 83 aa2.6□□□□□ -1.99
HDAC1-208ENST00000482310 PHGR1C9JFL3 82 aa2.47□□□□□ -2.01
HDAC1-208ENST00000482310 MUC19Q7Z5P9 8384 aa2.14□□□□□ -2.07
HDAC1-208ENST00000482310 KRTAP21-1Q3LI58 79 aa1.84□□□□□ -2.11
HDAC1-208ENST00000482310 MUC16Q8WXI7 14507 aa1.52□□□□□ -2.17
Retrieved 78 of 20,778 RNA–protein pairs in 11.2 ms