RNA–Protein interactions for RNA: ENST00000482195.5

DDX39B-220, Transcript of DExD-box helicase 39B, humanhuman

TSL 2

Gene DDX39B, Length 1,232 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-220ENST00000482195 SNURFQ9Y675 71 aa3.82□□□□□ -1.8
DDX39B-220ENST00000482195 SMIM26A0A096LP01 95 aa3.81□□□□□ -1.8
DDX39B-220ENST00000482195 AHNAK2Q8IVF2 5795 aa3.8□□□□□ -1.8
DDX39B-220ENST00000482195 KRTAP13-4Q3LI77 160 aa3.77□□□□□ -1.81
DDX39B-220ENST00000482195 SPANXA2-OT1Q8N9U9 137 aa3.76□□□□□ -1.81
DDX39B-220ENST00000482195 LCE3EQ5T5B0 92 aa3.75□□□□□ -1.81
DDX39B-220ENST00000482195 PP632Q6XCG6 107 aa3.74□□□□□ -1.81
DDX39B-220ENST00000482195 MT1GP13640 62 aa3.73□□□□□ -1.81
DDX39B-220ENST00000482195 KRTAP19-5Q3LI72 72 aa3.73□□□□□ -1.81
DDX39B-220ENST00000482195 V9GYY9 64 aa3.73□□□□□ -1.81
DDX39B-220ENST00000482195 A0A0D9SG42 100 aa3.72□□□□□ -1.81
DDX39B-220ENST00000482195 CCDC179H3BU77 68 aa3.7□□□□□ -1.82
DDX39B-220ENST00000482195 H7BZZ5 65 aa3.7□□□□□ -1.82
DDX39B-220ENST00000482195 MT1MQ8N339 61 aa3.69□□□□□ -1.82
DDX39B-220ENST00000482195 PSPHP1O15172 72 aa3.68□□□□□ -1.82
DDX39B-220ENST00000482195 KRTAP5-10Q6L8G5 202 aa3.68□□□□□ -1.82
DDX39B-220ENST00000482195 ATP5EP56381 51 aaPredicted RBP3.67□□□□□ -1.82
DDX39B-220ENST00000482195 SPINT4Q6UDR6 99 aa3.65□□□□□ -1.83
DDX39B-220ENST00000482195 TMEM258P61165 79 aa3.64□□□□□ -1.83
DDX39B-220ENST00000482195 MT1LQ93083 61 aa3.64□□□□□ -1.83
DDX39B-220ENST00000482195 COA5Q86WW8 74 aa3.63□□□□□ -1.83
DDX39B-220ENST00000482195 KRTAP4-3Q9BYR4 195 aa3.63□□□□□ -1.83
DDX39B-220ENST00000482195 KRTAP5-11Q6L8G4 156 aa3.62□□□□□ -1.83
DDX39B-220ENST00000482195 KRTAP5-4Q6L8H1 288 aa3.61□□□□□ -1.83
DDX39B-220ENST00000482195 KRTAP9-6A8MVA2 160 aa3.6□□□□□ -1.83
DDX39B-220ENST00000482195 SPATA8Q6RVD6 105 aa3.59□□□□□ -1.83
DDX39B-220ENST00000482195 KRTAP5-7Q6L8G8 165 aa3.57□□□□□ -1.84
DDX39B-220ENST00000482195 SERP1Q9Y6X1 66 aa3.57□□□□□ -1.84
DDX39B-220ENST00000482195 C10orf95Q9H7T3 257 aa3.55□□□□□ -1.84
DDX39B-220ENST00000482195 LUZP6Q538Z0 58 aa3.54□□□□□ -1.84
DDX39B-220ENST00000482195 KRTAP12-1P59990 96 aa3.53□□□□□ -1.84
DDX39B-220ENST00000482195 LCE3AQ5TA76 89 aa3.53□□□□□ -1.84
DDX39B-220ENST00000482195 PRO0628Q9UI54 55 aa3.53□□□□□ -1.84
DDX39B-220ENST00000482195 SPRR5A0A1B0GTR4 108 aa3.52□□□□□ -1.85
DDX39B-220ENST00000482195 A0A1B0GU33 70 aa3.5□□□□□ -1.85
DDX39B-220ENST00000482195 PRR15LQ9BU68 103 aa3.48□□□□□ -1.85
DDX39B-220ENST00000482195 A0A1B0GU69 56 aa3.47□□□□□ -1.85
DDX39B-220ENST00000482195 KRTAP20-2Q3LI61 65 aa3.47□□□□□ -1.85
DDX39B-220ENST00000482195 TNP1P09430 55 aa3.46□□□□□ -1.86
DDX39B-220ENST00000482195 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.46□□□□□ -1.86
DDX39B-220ENST00000482195 LINC01558Q9Y6Z2 57 aa3.41□□□□□ -1.86
DDX39B-220ENST00000482195 RPS28P62857 69 aaKnown RBP3.4□□□□□ -1.87
DDX39B-220ENST00000482195 KRTAP12-4P60329 112 aa3.39□□□□□ -1.87
DDX39B-220ENST00000482195 KRTAP12-3P60328 96 aa3.38□□□□□ -1.87
DDX39B-220ENST00000482195 KRTAP5-5Q701N2 237 aaPredicted RBP3.37□□□□□ -1.87
DDX39B-220ENST00000482195 Q1T7F1 81 aa3.35□□□□□ -1.87
DDX39B-220ENST00000482195 UQCR11O14957 56 aa3.34□□□□□ -1.87
DDX39B-220ENST00000482195 SYNE1Q8NF91 8797 aaKnown RBP3.29□□□□□ -1.88
DDX39B-220ENST00000482195 MIR22HGQ0VDD5 57 aa3.27□□□□□ -1.89
DDX39B-220ENST00000482195 A6NED7 52 aa3.26□□□□□ -1.89
DDX39B-220ENST00000482195 K7ERS5 55 aa3.25□□□□□ -1.89
DDX39B-220ENST00000482195 LCE3DQ9BYE3 92 aa3.2□□□□□ -1.9
DDX39B-220ENST00000482195 AHNAKQ09666 5890 aaKnown RBP3.18□□□□□ -1.9
DDX39B-220ENST00000482195 MUC5BQ9HC84 5762 aaPredicted RBP3.16□□□□□ -1.9
DDX39B-220ENST00000482195 MUC5ACP98088 5654 aa3.15□□□□□ -1.91
DDX39B-220ENST00000482195 CDC42SE1Q9NRR8 79 aa3.14□□□□□ -1.91
DDX39B-220ENST00000482195 KRTAP5-8O75690 187 aa3.12□□□□□ -1.91
DDX39B-220ENST00000482195 KRTAP25-1Q3LHN0 102 aa3.12□□□□□ -1.91
DDX39B-220ENST00000482195 KRTAP5-2Q701N4 177 aa3.12□□□□□ -1.91
DDX39B-220ENST00000482195 KRTAP6-1Q3LI64 71 aa3.1□□□□□ -1.91
DDX39B-220ENST00000482195 MT1AP04731 61 aa3.09□□□□□ -1.91
DDX39B-220ENST00000482195 BRK1Q8WUW1 75 aa3.06□□□□□ -1.92
DDX39B-220ENST00000482195 KRTAP6-2Q3LI66 62 aa3.02□□□□□ -1.93
DDX39B-220ENST00000482195 KRTAP5-1Q6L8H4 278 aa3.02□□□□□ -1.93
DDX39B-220ENST00000482195 ROMO1P60602 79 aa3□□□□□ -1.93
DDX39B-220ENST00000482195 OBSCNQ5VST9 7968 aa2.96□□□□□ -1.94
DDX39B-220ENST00000482195 KRTAP4-4Q9BYR3 166 aa2.92□□□□□ -1.94
DDX39B-220ENST00000482195 PMAIP1Q13794 54 aa2.89□□□□□ -1.95
DDX39B-220ENST00000482195 KTN1-AS1Q86SY8 53 aa2.7□□□□□ -1.98
DDX39B-220ENST00000482195 LCE1CQ5T751 118 aa2.61□□□□□ -1.99
DDX39B-220ENST00000482195 LCE1BQ5T7P3 118 aa2.61□□□□□ -1.99
DDX39B-220ENST00000482195 PHGR1C9JFL3 82 aa2.2□□□□□ -2.06
DDX39B-220ENST00000482195 MUC19Q7Z5P9 8384 aa2.09□□□□□ -2.08
DDX39B-220ENST00000482195 KRTAP21-2Q3LI59 83 aa2.01□□□□□ -2.09
DDX39B-220ENST00000482195 INE1O15225 51 aa1.89□□□□□ -2.11
DDX39B-220ENST00000482195 KRTAP21-1Q3LI58 79 aa1.66□□□□□ -2.14
DDX39B-220ENST00000482195 PRM1P04553 51 aa1.53□□□□□ -2.16
DDX39B-220ENST00000482195 MUC16Q8WXI7 14507 aa1.34□□□□□ -2.19
Retrieved 78 of 20,778 RNA–protein pairs in 12.3 ms