RNA–Protein interactions for RNA: ENST00000482042.1

CTNNB1-213, Transcript of catenin beta 1, humanhuman

TSL 2

Gene CTNNB1, Length 1,366 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNB1-213ENST00000482042 A0A1B0GU69 56 aa2.94□□□□□ -1.94
CTNNB1-213ENST00000482042 KRTAP5-8O75690 187 aa2.94□□□□□ -1.94
CTNNB1-213ENST00000482042 Q1T7F1 81 aa2.94□□□□□ -1.94
CTNNB1-213ENST00000482042 PLAC4Q8WY50 150 aa2.93□□□□□ -1.94
CTNNB1-213ENST00000482042 LCE1CQ5T751 118 aa2.92□□□□□ -1.94
CTNNB1-213ENST00000482042 LCE1BQ5T7P3 118 aa2.92□□□□□ -1.94
CTNNB1-213ENST00000482042 KRTAP19-6Q3LI70 58 aa2.91□□□□□ -1.94
CTNNB1-213ENST00000482042 USH2AO75445 5202 aa2.9□□□□□ -1.94
CTNNB1-213ENST00000482042 A0A1B0GU33 70 aa2.9□□□□□ -1.94
CTNNB1-213ENST00000482042 MT1BP07438 61 aa2.9□□□□□ -1.94
CTNNB1-213ENST00000482042 LINC01558Q9Y6Z2 57 aa2.9□□□□□ -1.94
CTNNB1-213ENST00000482042 MIR22HGQ0VDD5 57 aa2.88□□□□□ -1.95
CTNNB1-213ENST00000482042 KRTAP25-1Q3LHN0 102 aa2.88□□□□□ -1.95
CTNNB1-213ENST00000482042 PRO2289Q9P1D8 64 aa2.87□□□□□ -1.95
CTNNB1-213ENST00000482042 FSIP2Q5CZC0 6907 aa2.87□□□□□ -1.95
CTNNB1-213ENST00000482042 SSPOA2VEC9 5147 aa2.86□□□□□ -1.95
CTNNB1-213ENST00000482042 CDC42SE1Q9NRR8 79 aa2.84□□□□□ -1.96
CTNNB1-213ENST00000482042 UQCR11O14957 56 aa2.83□□□□□ -1.96
CTNNB1-213ENST00000482042 KRTAP13-4Q3LI77 160 aa2.82□□□□□ -1.96
CTNNB1-213ENST00000482042 SPATA8Q6RVD6 105 aa2.81□□□□□ -1.96
CTNNB1-213ENST00000482042 A0A0D9SG42 100 aa2.79□□□□□ -1.96
CTNNB1-213ENST00000482042 LCE3DQ9BYE3 92 aa2.79□□□□□ -1.96
CTNNB1-213ENST00000482042 SPINT4Q6UDR6 99 aa2.77□□□□□ -1.97
CTNNB1-213ENST00000482042 MT1XP80297 61 aa2.76□□□□□ -1.97
CTNNB1-213ENST00000482042 KRTAP12-1P59990 96 aa2.74□□□□□ -1.97
CTNNB1-213ENST00000482042 FCGBPQ9Y6R7 5405 aaPredicted RBP2.74□□□□□ -1.97
CTNNB1-213ENST00000482042 PP632Q6XCG6 107 aa2.71□□□□□ -1.98
CTNNB1-213ENST00000482042 MACF1Q9UPN3 7388 aaKnown RBP2.69□□□□□ -1.98
CTNNB1-213ENST00000482042 KRTAP6-3Q3LI67 103 aa2.67□□□□□ -1.98
CTNNB1-213ENST00000482042 TNP1P09430 55 aa2.63□□□□□ -1.99
CTNNB1-213ENST00000482042 KRTAP8-1Q8IUC2 63 aa2.62□□□□□ -1.99
CTNNB1-213ENST00000482042 C10orf95Q9H7T3 257 aa2.6□□□□□ -1.99
CTNNB1-213ENST00000482042 SYNE2Q8WXH0 6885 aaKnown RBP2.58□□□□□ -2
CTNNB1-213ENST00000482042 SPRR2FQ96RM1 72 aa2.57□□□□□ -2
CTNNB1-213ENST00000482042 KMT2DO14686 5537 aa2.53□□□□□ -2
CTNNB1-213ENST00000482042 SPRR2EP22531 72 aa2.49□□□□□ -2.01
CTNNB1-213ENST00000482042 SPRR2BP35325 72 aa2.49□□□□□ -2.01
CTNNB1-213ENST00000482042 SPRR2AP35326 72 aa2.49□□□□□ -2.01
CTNNB1-213ENST00000482042 KRTAP19-7Q3SYF9 63 aa2.47□□□□□ -2.01
CTNNB1-213ENST00000482042 MUC12Q9UKN1 5478 aa2.46□□□□□ -2.02
CTNNB1-213ENST00000482042 SPRR5A0A1B0GTR4 108 aa2.45□□□□□ -2.02
CTNNB1-213ENST00000482042 MT1EP04732 61 aa2.45□□□□□ -2.02
CTNNB1-213ENST00000482042 KRTAP19-5Q3LI72 72 aa2.45□□□□□ -2.02
CTNNB1-213ENST00000482042 INE1O15225 51 aa2.43□□□□□ -2.02
CTNNB1-213ENST00000482042 SPRR2DP22532 72 aa2.42□□□□□ -2.02
CTNNB1-213ENST00000482042 KRTAP12-3P60328 96 aa2.42□□□□□ -2.02
CTNNB1-213ENST00000482042 KRTAP5-7Q6L8G8 165 aa2.42□□□□□ -2.02
CTNNB1-213ENST00000482042 KRTAP19-3Q7Z4W3 81 aa2.42□□□□□ -2.02
CTNNB1-213ENST00000482042 MT1GP13640 62 aa2.4□□□□□ -2.02
CTNNB1-213ENST00000482042 KRTAP20-1Q3LI63 56 aa2.4□□□□□ -2.02
CTNNB1-213ENST00000482042 KRTAP2-3P0C7H8 128 aa2.39□□□□□ -2.03
CTNNB1-213ENST00000482042 KRTAP2-4Q9BYR9 128 aa2.39□□□□□ -2.03
CTNNB1-213ENST00000482042 MUC19Q7Z5P9 8384 aa2.39□□□□□ -2.03
CTNNB1-213ENST00000482042 NEBP20929 6669 aa2.38□□□□□ -2.03
CTNNB1-213ENST00000482042 MT1LQ93083 61 aa2.37□□□□□ -2.03
CTNNB1-213ENST00000482042 MDN1Q9NU22 5596 aa2.35□□□□□ -2.03
CTNNB1-213ENST00000482042 MT1MQ8N339 61 aa2.33□□□□□ -2.04
CTNNB1-213ENST00000482042 KRTAP2-1Q9BYU5 128 aa2.33□□□□□ -2.04
CTNNB1-213ENST00000482042 HMCN1Q96RW7 5635 aa2.26□□□□□ -2.05
CTNNB1-213ENST00000482042 DSTQ03001 7570 aaKnown RBP2.24□□□□□ -2.05
CTNNB1-213ENST00000482042 KRTAP21-2Q3LI59 83 aa2.09□□□□□ -2.08
CTNNB1-213ENST00000482042 MT4P47944 62 aa2.07□□□□□ -2.08
CTNNB1-213ENST00000482042 KRTAP12-4P60329 112 aa2.07□□□□□ -2.08
CTNNB1-213ENST00000482042 MT1AP04731 61 aa2.04□□□□□ -2.08
CTNNB1-213ENST00000482042 SYNE1Q8NF91 8797 aaKnown RBP2.01□□□□□ -2.09
CTNNB1-213ENST00000482042 KRTAP20-2Q3LI61 65 aa1.99□□□□□ -2.09
CTNNB1-213ENST00000482042 KRTAP6-1Q3LI64 71 aa1.98□□□□□ -2.09
CTNNB1-213ENST00000482042 KRTAP6-2Q3LI66 62 aa1.86□□□□□ -2.11
CTNNB1-213ENST00000482042 KRTAP5-10Q6L8G5 202 aa1.84□□□□□ -2.12
CTNNB1-213ENST00000482042 AHNAK2Q8IVF2 5795 aa1.8□□□□□ -2.12
CTNNB1-213ENST00000482042 GPR98Q8WXG9 6306 aa1.72□□□□□ -2.13
CTNNB1-213ENST00000482042 MUC5ACP98088 5654 aa1.54□□□□□ -2.16
CTNNB1-213ENST00000482042 MUC5BQ9HC84 5762 aaPredicted RBP1.44□□□□□ -2.18
CTNNB1-213ENST00000482042 AHNAKQ09666 5890 aaKnown RBP1.39□□□□□ -2.19
CTNNB1-213ENST00000482042 PRM1P04553 51 aa1.27□□□□□ -2.21
CTNNB1-213ENST00000482042 PHGR1C9JFL3 82 aa1.18□□□□□ -2.22
CTNNB1-213ENST00000482042 MUC16Q8WXI7 14507 aa1.08□□□□□ -2.24
CTNNB1-213ENST00000482042 KRTAP21-1Q3LI58 79 aa0.89□□□□□ -2.27
Retrieved 78 of 20,778 RNA–protein pairs in 8.6 ms