RNA–Protein interactions for RNA: ENST00000481441.1

RXRB-203, Transcript of retinoid X receptor beta, humanhuman

TSL 2

Gene RXRB, Length 1,330 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-203ENST00000481441 KRTAP19-3Q7Z4W3 81 aa6.55□□□□□ -1.36
RXRB-203ENST00000481441 KRTAP19-7Q3SYF9 63 aa6.53□□□□□ -1.36
RXRB-203ENST00000481441 CDC42SE1Q9NRR8 79 aa6.52□□□□□ -1.37
RXRB-203ENST00000481441 AHNAK2Q8IVF2 5795 aa6.52□□□□□ -1.37
RXRB-203ENST00000481441 MT1EP04732 61 aa6.5□□□□□ -1.37
RXRB-203ENST00000481441 MT4P47944 62 aa6.5□□□□□ -1.37
RXRB-203ENST00000481441 H3BS24 57 aa6.49□□□□□ -1.37
RXRB-203ENST00000481441 LCE4AQ5TA78 99 aa6.49□□□□□ -1.37
RXRB-203ENST00000481441 KRTAP5-10Q6L8G5 202 aa6.49□□□□□ -1.37
RXRB-203ENST00000481441 CAMK2N1Q7Z7J9 78 aa6.44□□□□□ -1.38
RXRB-203ENST00000481441 BRK1Q8WUW1 75 aa6.42□□□□□ -1.38
RXRB-203ENST00000481441 K7ERS5 55 aa6.4□□□□□ -1.39
RXRB-203ENST00000481441 A0A0A0MQY5 61 aa6.39□□□□□ -1.39
RXRB-203ENST00000481441 MT1GP13640 62 aa6.33□□□□□ -1.4
RXRB-203ENST00000481441 KRTAP5-7Q6L8G8 165 aa6.31□□□□□ -1.4
RXRB-203ENST00000481441 PMAIP1Q13794 54 aa6.3□□□□□ -1.4
RXRB-203ENST00000481441 KRTAP5-4Q6L8H1 288 aa6.28□□□□□ -1.4
RXRB-203ENST00000481441 KRTAP4-6Q9BYQ5 205 aa6.27□□□□□ -1.41
RXRB-203ENST00000481441 PP632Q6XCG6 107 aa6.26□□□□□ -1.41
RXRB-203ENST00000481441 C10orf95Q9H7T3 257 aa6.24□□□□□ -1.41
RXRB-203ENST00000481441 MT1MQ8N339 61 aa6.23□□□□□ -1.41
RXRB-203ENST00000481441 KRTAP19-5Q3LI72 72 aa6.2□□□□□ -1.42
RXRB-203ENST00000481441 KRTAP5-3Q6L8H2 238 aa6.2□□□□□ -1.42
RXRB-203ENST00000481441 ROMO1P60602 79 aa6.11□□□□□ -1.43
RXRB-203ENST00000481441 MT1LQ93083 61 aa6.11□□□□□ -1.43
RXRB-203ENST00000481441 KRTAP4-3Q9BYR4 195 aa6.11□□□□□ -1.43
RXRB-203ENST00000481441 TNP1P09430 55 aa6.07□□□□□ -1.44
RXRB-203ENST00000481441 SPRR5A0A1B0GTR4 108 aa6.02□□□□□ -1.45
RXRB-203ENST00000481441 KRTAP25-1Q3LHN0 102 aa6.01□□□□□ -1.45
RXRB-203ENST00000481441 KRTAP20-2Q3LI61 65 aa5.96□□□□□ -1.46
RXRB-203ENST00000481441 KTN1-AS1Q86SY8 53 aa5.92□□□□□ -1.46
RXRB-203ENST00000481441 LCE3AQ5TA76 89 aa5.89□□□□□ -1.47
RXRB-203ENST00000481441 KRTAP4-7Q9BYR0 210 aa5.8□□□□□ -1.48
RXRB-203ENST00000481441 KRTAP23-1A1A580 65 aa5.79□□□□□ -1.48
RXRB-203ENST00000481441 KRTAP5-5Q701N2 237 aaPredicted RBP5.78□□□□□ -1.48
RXRB-203ENST00000481441 KRTAP12-4P60329 112 aa5.74□□□□□ -1.49
RXRB-203ENST00000481441 PRAC1Q96KF2 57 aa5.73□□□□□ -1.49
RXRB-203ENST00000481441 KRTAP12-3P60328 96 aa5.65□□□□□ -1.51
RXRB-203ENST00000481441 SYNE1Q8NF91 8797 aaKnown RBP5.64□□□□□ -1.51
RXRB-203ENST00000481441 KRTAP4-11Q9BYQ6 195 aa5.58□□□□□ -1.52
RXRB-203ENST00000481441 AHNAKQ09666 5890 aaKnown RBP5.55□□□□□ -1.52
RXRB-203ENST00000481441 MUC5ACP98088 5654 aa5.52□□□□□ -1.53
RXRB-203ENST00000481441 LOC100996750A0A140TA64 210 aa5.51□□□□□ -1.53
RXRB-203ENST00000481441 KRTAP15-1Q3LI76 137 aa5.47□□□□□ -1.53
RXRB-203ENST00000481441 KRTAP5-8O75690 187 aa5.43□□□□□ -1.54
RXRB-203ENST00000481441 MUC5BQ9HC84 5762 aaPredicted RBP5.42□□□□□ -1.54
RXRB-203ENST00000481441 KRTAP5-2Q701N4 177 aa5.41□□□□□ -1.54
RXRB-203ENST00000481441 KRTAP19-4Q3LI73 84 aa5.28□□□□□ -1.56
RXRB-203ENST00000481441 LCE3CQ5T5A8 94 aa5.25□□□□□ -1.57
RXRB-203ENST00000481441 LUZP6Q538Z0 58 aa5.23□□□□□ -1.57
RXRB-203ENST00000481441 KRTAP9-9Q9BYP9 154 aa5.22□□□□□ -1.57
RXRB-203ENST00000481441 KRTAP6-1Q3LI64 71 aa5.2□□□□□ -1.58
RXRB-203ENST00000481441 MT1AP04731 61 aa5.19□□□□□ -1.58
RXRB-203ENST00000481441 OBSCNQ5VST9 7968 aa5.18□□□□□ -1.58
RXRB-203ENST00000481441 KRTAP6-2Q3LI66 62 aa5.07□□□□□ -1.6
RXRB-203ENST00000481441 KRTAP9-4Q9BYQ2 154 aa5.07□□□□□ -1.6
RXRB-203ENST00000481441 KRTAP9-6A8MVA2 160 aa4.98□□□□□ -1.61
RXRB-203ENST00000481441 KRTAP5-1Q6L8H4 278 aa4.96□□□□□ -1.62
RXRB-203ENST00000481441 NDUFAF8A1L188 74 aa4.8□□□□□ -1.64
RXRB-203ENST00000481441 MT3P25713 68 aa4.76□□□□□ -1.65
RXRB-203ENST00000481441 KRTAP4-12Q9BQ66 201 aa4.72□□□□□ -1.65
RXRB-203ENST00000481441 LCE1EQ5T753 118 aa4.52□□□□□ -1.69
RXRB-203ENST00000481441 KRTAP4-2Q9BYR5 136 aa4.35□□□□□ -1.71
RXRB-203ENST00000481441 LCE1BQ5T7P3 118 aa4.29□□□□□ -1.72
RXRB-203ENST00000481441 INE1O15225 51 aa4.2□□□□□ -1.74
RXRB-203ENST00000481441 LCE1CQ5T751 118 aa4.2□□□□□ -1.74
RXRB-203ENST00000481441 KRTAP5-11Q6L8G4 156 aa3.95□□□□□ -1.78
RXRB-203ENST00000481441 LCE3DQ9BYE3 92 aa3.9□□□□□ -1.79
RXRB-203ENST00000481441 LCE1FQ5T754 118 aa3.88□□□□□ -1.79
RXRB-203ENST00000481441 PHGR1C9JFL3 82 aa3.79□□□□□ -1.8
RXRB-203ENST00000481441 LCE3EQ5T5B0 92 aa3.76□□□□□ -1.81
RXRB-203ENST00000481441 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.76□□□□□ -1.81
RXRB-203ENST00000481441 KRTAP21-2Q3LI59 83 aa3.44□□□□□ -1.86
RXRB-203ENST00000481441 MUC19Q7Z5P9 8384 aa3.25□□□□□ -1.89
RXRB-203ENST00000481441 KRTAP4-4Q9BYR3 166 aa3.23□□□□□ -1.89
RXRB-203ENST00000481441 PRM1P04553 51 aa3.18□□□□□ -1.9
RXRB-203ENST00000481441 KRTAP21-1Q3LI58 79 aa2.89□□□□□ -1.95
RXRB-203ENST00000481441 MUC16Q8WXI7 14507 aa2.29□□□□□ -2.04
Retrieved 78 of 20,778 RNA–protein pairs in 13 ms