RNA–Protein interactions for RNA: ENST00000481281.5

HDAC1-207, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 721 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-207ENST00000481281 KRTAP23-1A1A580 65 aa4.79□□□□□ -1.64
HDAC1-207ENST00000481281 KRTAP4-9Q9BYQ8 210 aa4.79□□□□□ -1.64
HDAC1-207ENST00000481281 KRTAP19-5Q3LI72 72 aa4.78□□□□□ -1.64
HDAC1-207ENST00000481281 LCE4AQ5TA78 99 aa4.78□□□□□ -1.64
HDAC1-207ENST00000481281 C10orf95Q9H7T3 257 aa4.78□□□□□ -1.64
HDAC1-207ENST00000481281 KRTAP19-4Q3LI73 84 aa4.75□□□□□ -1.65
HDAC1-207ENST00000481281 PRO0628Q9UI54 55 aa4.75□□□□□ -1.65
HDAC1-207ENST00000481281 TNP1P09430 55 aa4.74□□□□□ -1.65
HDAC1-207ENST00000481281 UQCR11O14957 56 aa4.72□□□□□ -1.65
HDAC1-207ENST00000481281 MT1GP13640 62 aa4.7□□□□□ -1.66
HDAC1-207ENST00000481281 LCE3AQ5TA76 89 aa4.7□□□□□ -1.66
HDAC1-207ENST00000481281 KRTAP4-2Q9BYR5 136 aa4.68□□□□□ -1.66
HDAC1-207ENST00000481281 DSTQ03001 7570 aaKnown RBP4.68□□□□□ -1.66
HDAC1-207ENST00000481281 PP632Q6XCG6 107 aa4.65□□□□□ -1.67
HDAC1-207ENST00000481281 MT1LQ93083 61 aa4.65□□□□□ -1.67
HDAC1-207ENST00000481281 MT1MQ8N339 61 aa4.62□□□□□ -1.67
HDAC1-207ENST00000481281 KRTAP4-11Q9BYQ6 195 aa4.62□□□□□ -1.67
HDAC1-207ENST00000481281 MIR22HGQ0VDD5 57 aa4.61□□□□□ -1.67
HDAC1-207ENST00000481281 V9GYY9 64 aa4.58□□□□□ -1.68
HDAC1-207ENST00000481281 Q1T7F1 81 aa4.56□□□□□ -1.68
HDAC1-207ENST00000481281 PSPHP1O15172 72 aa4.54□□□□□ -1.68
HDAC1-207ENST00000481281 BRK1Q8WUW1 75 aa4.53□□□□□ -1.68
HDAC1-207ENST00000481281 KRTAP12-3P60328 96 aa4.52□□□□□ -1.69
HDAC1-207ENST00000481281 KRTAP25-1Q3LHN0 102 aa4.51□□□□□ -1.69
HDAC1-207ENST00000481281 K7ERS5 55 aa4.5□□□□□ -1.69
HDAC1-207ENST00000481281 KRTAP4-3Q9BYR4 195 aa4.5□□□□□ -1.69
HDAC1-207ENST00000481281 PMAIP1Q13794 54 aa4.46□□□□□ -1.7
HDAC1-207ENST00000481281 KRTAP5-4Q6L8H1 288 aa4.4□□□□□ -1.71
HDAC1-207ENST00000481281 A6NED7 52 aa4.39□□□□□ -1.71
HDAC1-207ENST00000481281 A0A0A0MQY5 61 aa4.36□□□□□ -1.71
HDAC1-207ENST00000481281 MT4P47944 62 aa4.36□□□□□ -1.71
HDAC1-207ENST00000481281 KTN1-AS1Q86SY8 53 aa4.32□□□□□ -1.72
HDAC1-207ENST00000481281 HMCN1Q96RW7 5635 aa4.29□□□□□ -1.72
HDAC1-207ENST00000481281 CDC42SE1Q9NRR8 79 aa4.28□□□□□ -1.72
HDAC1-207ENST00000481281 GPR98Q8WXG9 6306 aa4.28□□□□□ -1.72
HDAC1-207ENST00000481281 KRTAP5-5Q701N2 237 aaPredicted RBP4.25□□□□□ -1.73
HDAC1-207ENST00000481281 KRTAP15-1Q3LI76 137 aa4.24□□□□□ -1.73
HDAC1-207ENST00000481281 ROMO1P60602 79 aa4.22□□□□□ -1.73
HDAC1-207ENST00000481281 LCE3CQ5T5A8 94 aa4.17□□□□□ -1.74
HDAC1-207ENST00000481281 KRTAP5-3Q6L8H2 238 aa4.17□□□□□ -1.74
HDAC1-207ENST00000481281 KRTAP20-2Q3LI61 65 aa4.13□□□□□ -1.75
HDAC1-207ENST00000481281 SPRR5A0A1B0GTR4 108 aa4.12□□□□□ -1.75
HDAC1-207ENST00000481281 KRTAP12-4P60329 112 aa4.09□□□□□ -1.75
HDAC1-207ENST00000481281 KRTAP5-10Q6L8G5 202 aa4.09□□□□□ -1.75
HDAC1-207ENST00000481281 AHNAK2Q8IVF2 5795 aa4.09□□□□□ -1.76
HDAC1-207ENST00000481281 SYNE1Q8NF91 8797 aaKnown RBP4.03□□□□□ -1.76
HDAC1-207ENST00000481281 MT1AP04731 61 aa3.97□□□□□ -1.77
HDAC1-207ENST00000481281 KRTAP9-6A8MVA2 160 aa3.96□□□□□ -1.78
HDAC1-207ENST00000481281 KRTAP6-1Q3LI64 71 aa3.93□□□□□ -1.78
HDAC1-207ENST00000481281 KRTAP5-7Q6L8G8 165 aa3.93□□□□□ -1.78
HDAC1-207ENST00000481281 PRAC1Q96KF2 57 aa3.9□□□□□ -1.79
HDAC1-207ENST00000481281 KRTAP5-2Q701N4 177 aa3.87□□□□□ -1.79
HDAC1-207ENST00000481281 KRTAP6-2Q3LI66 62 aa3.74□□□□□ -1.81
HDAC1-207ENST00000481281 KRTAP5-8O75690 187 aa3.64□□□□□ -1.83
HDAC1-207ENST00000481281 MT3P25713 68 aa3.61□□□□□ -1.83
HDAC1-207ENST00000481281 OBSCNQ5VST9 7968 aa3.58□□□□□ -1.84
HDAC1-207ENST00000481281 KRTAP5-1Q6L8H4 278 aa3.44□□□□□ -1.86
HDAC1-207ENST00000481281 NDUFAF8A1L188 74 aa3.41□□□□□ -1.86
HDAC1-207ENST00000481281 MUC5ACP98088 5654 aa3.36□□□□□ -1.87
HDAC1-207ENST00000481281 MUC5BQ9HC84 5762 aaPredicted RBP3.35□□□□□ -1.87
HDAC1-207ENST00000481281 LCE1EQ5T753 118 aa3.32□□□□□ -1.88
HDAC1-207ENST00000481281 AHNAKQ09666 5890 aaKnown RBP3.31□□□□□ -1.88
HDAC1-207ENST00000481281 LUZP6Q538Z0 58 aa3.26□□□□□ -1.89
HDAC1-207ENST00000481281 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.12□□□□□ -1.91
HDAC1-207ENST00000481281 KRTAP5-11Q6L8G4 156 aa3.1□□□□□ -1.91
HDAC1-207ENST00000481281 LCE1CQ5T751 118 aa3.08□□□□□ -1.92
HDAC1-207ENST00000481281 LCE1BQ5T7P3 118 aa3.08□□□□□ -1.92
HDAC1-207ENST00000481281 LCE1FQ5T754 118 aa3.06□□□□□ -1.92
HDAC1-207ENST00000481281 LCE3DQ9BYE3 92 aa3.01□□□□□ -1.93
HDAC1-207ENST00000481281 INE1O15225 51 aa2.96□□□□□ -1.94
HDAC1-207ENST00000481281 LCE3EQ5T5B0 92 aa2.84□□□□□ -1.95
HDAC1-207ENST00000481281 KRTAP21-2Q3LI59 83 aa2.6□□□□□ -1.99
HDAC1-207ENST00000481281 KRTAP4-4Q9BYR3 166 aa2.6□□□□□ -1.99
HDAC1-207ENST00000481281 PHGR1C9JFL3 82 aa2.41□□□□□ -2.02
HDAC1-207ENST00000481281 MUC19Q7Z5P9 8384 aa2.19□□□□□ -2.06
HDAC1-207ENST00000481281 PRM1P04553 51 aa2.16□□□□□ -2.06
HDAC1-207ENST00000481281 KRTAP21-1Q3LI58 79 aa1.79□□□□□ -2.12
HDAC1-207ENST00000481281 MUC16Q8WXI7 14507 aa1.54□□□□□ -2.16
Retrieved 78 of 20,778 RNA–protein pairs in 627 ms