RNA–Protein interactions for RNA: ENST00000481210.5

SEC61A1-204, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 5

Gene SEC61A1, Length 521 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-204ENST00000481210 MT1FP04733 61 aa2.49□□□□□ -2.01
SEC61A1-204ENST00000481210 LINC01554Q52M75 96 aa2.49□□□□□ -2.01
SEC61A1-204ENST00000481210 LCE1AQ5T7P2 110 aa2.48□□□□□ -2.01
SEC61A1-204ENST00000481210 S4R3F8 94 aa2.48□□□□□ -2.01
SEC61A1-204ENST00000481210 MUC5BQ9HC84 5762 aaPredicted RBP2.46□□□□□ -2.02
SEC61A1-204ENST00000481210 P0C880 135 aa2.46□□□□□ -2.02
SEC61A1-204ENST00000481210 KRTAP25-1Q3LHN0 102 aa2.46□□□□□ -2.02
SEC61A1-204ENST00000481210 CRIPTQ9P021 101 aa2.44□□□□□ -2.02
SEC61A1-204ENST00000481210 A0A0D9SG42 100 aa2.43□□□□□ -2.02
SEC61A1-204ENST00000481210 SPRR2FQ96RM1 72 aa2.43□□□□□ -2.02
SEC61A1-204ENST00000481210 MUC5ACP98088 5654 aa2.41□□□□□ -2.02
SEC61A1-204ENST00000481210 KRTAP12-2P59991 146 aa2.41□□□□□ -2.02
SEC61A1-204ENST00000481210 ROMO1P60602 79 aa2.41□□□□□ -2.02
SEC61A1-204ENST00000481210 KRTAP12-1P59990 96 aa2.39□□□□□ -2.03
SEC61A1-204ENST00000481210 K7ERS5 55 aa2.38□□□□□ -2.03
SEC61A1-204ENST00000481210 KRTAP10-10P60014 251 aa2.38□□□□□ -2.03
SEC61A1-204ENST00000481210 C10orf95Q9H7T3 257 aa2.38□□□□□ -2.03
SEC61A1-204ENST00000481210 SPINT4Q6UDR6 99 aa2.33□□□□□ -2.04
SEC61A1-204ENST00000481210 MT4P47944 62 aa2.31□□□□□ -2.04
SEC61A1-204ENST00000481210 M0QZ58 72 aa2.3□□□□□ -2.04
SEC61A1-204ENST00000481210 R4GN34 69 aa2.24□□□□□ -2.05
SEC61A1-204ENST00000481210 KRTAP10-7P60409 375 aaPredicted RBP2.19□□□□□ -2.06
SEC61A1-204ENST00000481210 NDUFAF8A1L188 74 aa2.17□□□□□ -2.06
SEC61A1-204ENST00000481210 KRTAP10-5P60370 271 aa2.15□□□□□ -2.07
SEC61A1-204ENST00000481210 KRTAP5-11Q6L8G4 156 aa2.13□□□□□ -2.07
SEC61A1-204ENST00000481210 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.13□□□□□ -2.07
SEC61A1-204ENST00000481210 KRTAP5-4Q6L8H1 288 aa2.13□□□□□ -2.07
SEC61A1-204ENST00000481210 CAMK2N1Q7Z7J9 78 aa2.13□□□□□ -2.07
SEC61A1-204ENST00000481210 KRTAP8-1Q8IUC2 63 aa2.11□□□□□ -2.07
SEC61A1-204ENST00000481210 PLAC4Q8WY50 150 aa2.11□□□□□ -2.07
SEC61A1-204ENST00000481210 LCE1EQ5T753 118 aa2.1□□□□□ -2.07
SEC61A1-204ENST00000481210 MT3P25713 68 aa2.09□□□□□ -2.07
SEC61A1-204ENST00000481210 SPRR2GQ9BYE4 73 aa2.09□□□□□ -2.07
SEC61A1-204ENST00000481210 PP632Q6XCG6 107 aa2.08□□□□□ -2.08
SEC61A1-204ENST00000481210 KRTAP5-8O75690 187 aa2.07□□□□□ -2.08
SEC61A1-204ENST00000481210 TNP1P09430 55 aa2.05□□□□□ -2.08
SEC61A1-204ENST00000481210 MT1BP07438 61 aa2.04□□□□□ -2.08
SEC61A1-204ENST00000481210 KRTAP19-8Q3LI54 63 aa2.03□□□□□ -2.08
SEC61A1-204ENST00000481210 LCE3AQ5TA76 89 aa2.03□□□□□ -2.08
SEC61A1-204ENST00000481210 MT1XP80297 61 aa2□□□□□ -2.09
SEC61A1-204ENST00000481210 A0A0A0MQY5 61 aa1.97□□□□□ -2.09
SEC61A1-204ENST00000481210 KRTAP20-2Q3LI61 65 aa1.95□□□□□ -2.1
SEC61A1-204ENST00000481210 LUZP6Q538Z0 58 aa1.94□□□□□ -2.1
SEC61A1-204ENST00000481210 KRTAP10-12P60413 245 aa1.92□□□□□ -2.1
SEC61A1-204ENST00000481210 SYNE1Q8NF91 8797 aaKnown RBP1.92□□□□□ -2.1
SEC61A1-204ENST00000481210 KRTAP5-2Q701N4 177 aa1.91□□□□□ -2.1
SEC61A1-204ENST00000481210 KRTAP12-3P60328 96 aa1.89□□□□□ -2.11
SEC61A1-204ENST00000481210 KRTAP19-5Q3LI72 72 aa1.86□□□□□ -2.11
SEC61A1-204ENST00000481210 KRTAP5-1Q6L8H4 278 aa1.85□□□□□ -2.11
SEC61A1-204ENST00000481210 KRTAP9-6A8MVA2 160 aa1.84□□□□□ -2.11
SEC61A1-204ENST00000481210 LCE1FQ5T754 118 aa1.84□□□□□ -2.11
SEC61A1-204ENST00000481210 PRO2289Q9P1D8 64 aa1.81□□□□□ -2.12
SEC61A1-204ENST00000481210 LCE3CQ5T5A8 94 aa1.79□□□□□ -2.12
SEC61A1-204ENST00000481210 KRTAP19-7Q3SYF9 63 aa1.78□□□□□ -2.12
SEC61A1-204ENST00000481210 KRTAP4-4Q9BYR3 166 aa1.77□□□□□ -2.13
SEC61A1-204ENST00000481210 OBSCNQ5VST9 7968 aa1.76□□□□□ -2.13
SEC61A1-204ENST00000481210 MT1EP04732 61 aa1.73□□□□□ -2.13
SEC61A1-204ENST00000481210 MT1LQ93083 61 aa1.73□□□□□ -2.13
SEC61A1-204ENST00000481210 INE1O15225 51 aa1.71□□□□□ -2.14
SEC61A1-204ENST00000481210 KRTAP19-3Q7Z4W3 81 aa1.71□□□□□ -2.14
SEC61A1-204ENST00000481210 KRTAP4-3Q9BYR4 195 aa1.66□□□□□ -2.14
SEC61A1-204ENST00000481210 PHGR1C9JFL3 82 aa1.63□□□□□ -2.15
SEC61A1-204ENST00000481210 KRTAP12-4P60329 112 aa1.62□□□□□ -2.15
SEC61A1-204ENST00000481210 MT1MQ8N339 61 aa1.62□□□□□ -2.15
SEC61A1-204ENST00000481210 MT1GP13640 62 aa1.6□□□□□ -2.15
SEC61A1-204ENST00000481210 LCE3EQ5T5B0 92 aa1.58□□□□□ -2.16
SEC61A1-204ENST00000481210 KRTAP5-5Q701N2 237 aaPredicted RBP1.55□□□□□ -2.16
SEC61A1-204ENST00000481210 KRTAP6-1Q3LI64 71 aa1.47□□□□□ -2.17
SEC61A1-204ENST00000481210 MT1AP04731 61 aa1.45□□□□□ -2.18
SEC61A1-204ENST00000481210 LCE1CQ5T751 118 aa1.37□□□□□ -2.19
SEC61A1-204ENST00000481210 LCE1BQ5T7P3 118 aa1.37□□□□□ -2.19
SEC61A1-204ENST00000481210 LCE3DQ9BYE3 92 aa1.34□□□□□ -2.19
SEC61A1-204ENST00000481210 PRM1P04553 51 aa1.31□□□□□ -2.2
SEC61A1-204ENST00000481210 KRTAP6-2Q3LI66 62 aa1.3□□□□□ -2.2
SEC61A1-204ENST00000481210 KRTAP21-1Q3LI58 79 aa1.22□□□□□ -2.21
SEC61A1-204ENST00000481210 MUC19Q7Z5P9 8384 aa1.14□□□□□ -2.23
SEC61A1-204ENST00000481210 KRTAP21-2Q3LI59 83 aa0.98□□□□□ -2.25
SEC61A1-204ENST00000481210 MUC16Q8WXI7 14507 aa0.75□□□□□ -2.29
Retrieved 78 of 20,778 RNA–protein pairs in 11.7 ms