RNA–Protein interactions for RNA: ENST00000480420.5

CTPS1-209, Transcript of CTP synthase 1, humanhuman

TSL 3

Gene CTPS1, Length 750 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS1-209ENST00000480420 CYSTM1Q9H1C7 97 aa2.98□□□□□ -1.93
CTPS1-209ENST00000480420 A0A0A0MQY5 61 aa2.97□□□□□ -1.93
CTPS1-209ENST00000480420 A8MU10 97 aa2.97□□□□□ -1.93
CTPS1-209ENST00000480420 H7BZZ5 65 aa2.97□□□□□ -1.93
CTPS1-209ENST00000480420 KRTAP19-5Q3LI72 72 aa2.97□□□□□ -1.93
CTPS1-209ENST00000480420 SMIM26A0A096LP01 95 aa2.96□□□□□ -1.94
CTPS1-209ENST00000480420 KRTAP5-10Q6L8G5 202 aa2.93□□□□□ -1.94
CTPS1-209ENST00000480420 ANAPC13Q9BS18 74 aa2.93□□□□□ -1.94
CTPS1-209ENST00000480420 PP632Q6XCG6 107 aa2.92□□□□□ -1.94
CTPS1-209ENST00000480420 AHNAK2Q8IVF2 5795 aa2.92□□□□□ -1.94
CTPS1-209ENST00000480420 MT1GP13640 62 aa2.91□□□□□ -1.94
CTPS1-209ENST00000480420 HMCN1Q96RW7 5635 aa2.9□□□□□ -1.94
CTPS1-209ENST00000480420 PRO0628Q9UI54 55 aa2.9□□□□□ -1.95
CTPS1-209ENST00000480420 TNP1P09430 55 aa2.89□□□□□ -1.95
CTPS1-209ENST00000480420 RPS28P62857 69 aaKnown RBP2.89□□□□□ -1.95
CTPS1-209ENST00000480420 MT4P47944 62 aa2.88□□□□□ -1.95
CTPS1-209ENST00000480420 LCE3AQ5TA76 89 aa2.88□□□□□ -1.95
CTPS1-209ENST00000480420 PRR15LQ9BU68 103 aa2.88□□□□□ -1.95
CTPS1-209ENST00000480420 C10orf95Q9H7T3 257 aa2.88□□□□□ -1.95
CTPS1-209ENST00000480420 CCDC179H3BU77 68 aa2.86□□□□□ -1.95
CTPS1-209ENST00000480420 MT1MQ8N339 61 aa2.86□□□□□ -1.95
CTPS1-209ENST00000480420 MT1LQ93083 61 aa2.85□□□□□ -1.95
CTPS1-209ENST00000480420 KRTAP4-3Q9BYR4 195 aa2.85□□□□□ -1.95
CTPS1-209ENST00000480420 KRTAP5-7Q6L8G8 165 aa2.84□□□□□ -1.95
CTPS1-209ENST00000480420 ATP5EP56381 51 aaPredicted RBP2.8□□□□□ -1.96
CTPS1-209ENST00000480420 KRTAP12-3P60328 96 aa2.77□□□□□ -1.97
CTPS1-209ENST00000480420 LINC01558Q9Y6Z2 57 aa2.77□□□□□ -1.97
CTPS1-209ENST00000480420 SPRR5A0A1B0GTR4 108 aa2.76□□□□□ -1.97
CTPS1-209ENST00000480420 UQCR11O14957 56 aa2.76□□□□□ -1.97
CTPS1-209ENST00000480420 PMAIP1Q13794 54 aa2.76□□□□□ -1.97
CTPS1-209ENST00000480420 KRTAP5-4Q6L8H1 288 aa2.74□□□□□ -1.97
CTPS1-209ENST00000480420 KRTAP5-11Q6L8G4 156 aa2.73□□□□□ -1.97
CTPS1-209ENST00000480420 K7ERS5 55 aa2.71□□□□□ -1.98
CTPS1-209ENST00000480420 TMEM258P61165 79 aa2.71□□□□□ -1.98
CTPS1-209ENST00000480420 MIR22HGQ0VDD5 57 aa2.71□□□□□ -1.98
CTPS1-209ENST00000480420 PSPHP1O15172 72 aa2.67□□□□□ -1.98
CTPS1-209ENST00000480420 KRTAP25-1Q3LHN0 102 aa2.66□□□□□ -1.98
CTPS1-209ENST00000480420 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.65□□□□□ -1.99
CTPS1-209ENST00000480420 KRTAP12-4P60329 112 aa2.61□□□□□ -1.99
CTPS1-209ENST00000480420 KRTAP20-2Q3LI61 65 aa2.61□□□□□ -1.99
CTPS1-209ENST00000480420 KTN1-AS1Q86SY8 53 aa2.6□□□□□ -1.99
CTPS1-209ENST00000480420 BRK1Q8WUW1 75 aa2.6□□□□□ -1.99
CTPS1-209ENST00000480420 A6NED7 52 aa2.57□□□□□ -2
CTPS1-209ENST00000480420 LCE1EQ5T753 118 aa2.57□□□□□ -2
CTPS1-209ENST00000480420 KRTAP5-5Q701N2 237 aaPredicted RBP2.57□□□□□ -2
CTPS1-209ENST00000480420 Q1T7F1 81 aa2.54□□□□□ -2
CTPS1-209ENST00000480420 LCE3CQ5T5A8 94 aa2.53□□□□□ -2
CTPS1-209ENST00000480420 CDC42SE1Q9NRR8 79 aa2.53□□□□□ -2
CTPS1-209ENST00000480420 MT3P25713 68 aa2.49□□□□□ -2.01
CTPS1-209ENST00000480420 MUC5ACP98088 5654 aa2.49□□□□□ -2.01
CTPS1-209ENST00000480420 AHNAKQ09666 5890 aaKnown RBP2.49□□□□□ -2.01
CTPS1-209ENST00000480420 SYNE1Q8NF91 8797 aaKnown RBP2.49□□□□□ -2.01
CTPS1-209ENST00000480420 ROMO1P60602 79 aa2.47□□□□□ -2.01
CTPS1-209ENST00000480420 PRAC1Q96KF2 57 aa2.46□□□□□ -2.02
CTPS1-209ENST00000480420 KRTAP6-1Q3LI64 71 aa2.44□□□□□ -2.02
CTPS1-209ENST00000480420 LCE1FQ5T754 118 aa2.44□□□□□ -2.02
CTPS1-209ENST00000480420 KRTAP5-8O75690 187 aa2.42□□□□□ -2.02
CTPS1-209ENST00000480420 MT1AP04731 61 aa2.42□□□□□ -2.02
CTPS1-209ENST00000480420 MUC5BQ9HC84 5762 aaPredicted RBP2.42□□□□□ -2.02
CTPS1-209ENST00000480420 KRTAP9-6A8MVA2 160 aa2.36□□□□□ -2.03
CTPS1-209ENST00000480420 KRTAP6-2Q3LI66 62 aa2.36□□□□□ -2.03
CTPS1-209ENST00000480420 KRTAP5-1Q6L8H4 278 aa2.34□□□□□ -2.03
CTPS1-209ENST00000480420 KRTAP5-2Q701N4 177 aa2.34□□□□□ -2.03
CTPS1-209ENST00000480420 OBSCNQ5VST9 7968 aa2.3□□□□□ -2.04
CTPS1-209ENST00000480420 LUZP6Q538Z0 58 aa2.25□□□□□ -2.05
CTPS1-209ENST00000480420 KRTAP4-4Q9BYR3 166 aa2.25□□□□□ -2.05
CTPS1-209ENST00000480420 NDUFAF8A1L188 74 aa2.16□□□□□ -2.06
CTPS1-209ENST00000480420 LCE3EQ5T5B0 92 aa2.12□□□□□ -2.07
CTPS1-209ENST00000480420 LCE1BQ5T7P3 118 aa2.03□□□□□ -2.08
CTPS1-209ENST00000480420 LCE1CQ5T751 118 aa1.87□□□□□ -2.11
CTPS1-209ENST00000480420 INE1O15225 51 aa1.83□□□□□ -2.12
CTPS1-209ENST00000480420 LCE3DQ9BYE3 92 aa1.83□□□□□ -2.12
CTPS1-209ENST00000480420 PHGR1C9JFL3 82 aa1.71□□□□□ -2.14
CTPS1-209ENST00000480420 KRTAP21-2Q3LI59 83 aa1.57□□□□□ -2.16
CTPS1-209ENST00000480420 MUC19Q7Z5P9 8384 aa1.44□□□□□ -2.18
CTPS1-209ENST00000480420 KRTAP21-1Q3LI58 79 aa1.29□□□□□ -2.2
CTPS1-209ENST00000480420 PRM1P04553 51 aa1.28□□□□□ -2.2
CTPS1-209ENST00000480420 MUC16Q8WXI7 14507 aa1.04□□□□□ -2.24
Retrieved 78 of 20,778 RNA–protein pairs in 119 ms