RNA–Protein interactions for RNA: ENST00000479707.1

AGRN-208, Transcript of agrin, humanhuman

TSL 3

Gene AGRN, Length 584 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AGRN-208ENST00000479707 LCE5AQ5TCM9 118 aa6.85□□□□□ -1.31
AGRN-208ENST00000479707 KRTAP2-2Q9BYT5 123 aa6.85□□□□□ -1.31
AGRN-208ENST00000479707 KRTAP2-1Q9BYU5 128 aa6.85□□□□□ -1.31
AGRN-208ENST00000479707 BRK1Q8WUW1 75 aa6.78□□□□□ -1.32
AGRN-208ENST00000479707 KRTAP25-1Q3LHN0 102 aa6.77□□□□□ -1.33
AGRN-208ENST00000479707 MT1GP13640 62 aa6.74□□□□□ -1.33
AGRN-208ENST00000479707 MT1LQ93083 61 aa6.73□□□□□ -1.33
AGRN-208ENST00000479707 PP632Q6XCG6 107 aa6.68□□□□□ -1.34
AGRN-208ENST00000479707 KRTAP12-3P60328 96 aa6.67□□□□□ -1.34
AGRN-208ENST00000479707 MT1MQ8N339 61 aa6.64□□□□□ -1.35
AGRN-208ENST00000479707 DSTQ03001 7570 aaKnown RBP6.61□□□□□ -1.35
AGRN-208ENST00000479707 ROMO1P60602 79 aa6.6□□□□□ -1.35
AGRN-208ENST00000479707 KRTAP4-3Q9BYR4 195 aa6.54□□□□□ -1.36
AGRN-208ENST00000479707 KRTAP23-1A1A580 65 aa6.49□□□□□ -1.37
AGRN-208ENST00000479707 KRTAP4-7Q9BYR0 210 aa6.47□□□□□ -1.37
AGRN-208ENST00000479707 PRO0628Q9UI54 55 aa6.42□□□□□ -1.38
AGRN-208ENST00000479707 PMAIP1Q13794 54 aa6.4□□□□□ -1.38
AGRN-208ENST00000479707 KRTAP4-9Q9BYQ8 210 aa6.34□□□□□ -1.39
AGRN-208ENST00000479707 KRTAP15-1Q3LI76 137 aa6.32□□□□□ -1.4
AGRN-208ENST00000479707 KRTAP19-4Q3LI73 84 aa6.22□□□□□ -1.41
AGRN-208ENST00000479707 LCE4AQ5TA78 99 aa6.22□□□□□ -1.41
AGRN-208ENST00000479707 MT4P47944 62 aa6.18□□□□□ -1.42
AGRN-208ENST00000479707 LCE1DQ5T752 114 aa6.18□□□□□ -1.42
AGRN-208ENST00000479707 LCE3CQ5T5A8 94 aa6.17□□□□□ -1.42
AGRN-208ENST00000479707 KRTAP5-4Q6L8H1 288 aa6.14□□□□□ -1.43
AGRN-208ENST00000479707 LOC100996750A0A140TA64 210 aa6.12□□□□□ -1.43
AGRN-208ENST00000479707 KRTAP5-5Q701N2 237 aaPredicted RBP6.03□□□□□ -1.44
AGRN-208ENST00000479707 KTN1-AS1Q86SY8 53 aa6.02□□□□□ -1.45
AGRN-208ENST00000479707 KRTAP4-6Q9BYQ5 205 aa6.02□□□□□ -1.45
AGRN-208ENST00000479707 HMCN1Q96RW7 5635 aa6.01□□□□□ -1.45
AGRN-208ENST00000479707 PRAC1Q96KF2 57 aa5.98□□□□□ -1.45
AGRN-208ENST00000479707 KRTAP9-6A8MVA2 160 aa5.83□□□□□ -1.48
AGRN-208ENST00000479707 KRTAP12-4P60329 112 aa5.83□□□□□ -1.48
AGRN-208ENST00000479707 KRTAP20-2Q3LI61 65 aa5.81□□□□□ -1.48
AGRN-208ENST00000479707 GPR98Q8WXG9 6306 aa5.79□□□□□ -1.48
AGRN-208ENST00000479707 SPRR5A0A1B0GTR4 108 aa5.78□□□□□ -1.48
AGRN-208ENST00000479707 SYNE1Q8NF91 8797 aaKnown RBP5.76□□□□□ -1.49
AGRN-208ENST00000479707 MT1AP04731 61 aa5.72□□□□□ -1.49
AGRN-208ENST00000479707 SVIPQ8NHG7 77 aa5.72□□□□□ -1.49
AGRN-208ENST00000479707 AHNAK2Q8IVF2 5795 aa5.71□□□□□ -1.5
AGRN-208ENST00000479707 KRTAP6-1Q3LI64 71 aa5.7□□□□□ -1.5
AGRN-208ENST00000479707 KRTAP5-3Q6L8H2 238 aa5.61□□□□□ -1.51
AGRN-208ENST00000479707 KRTAP5-10Q6L8G5 202 aa5.57□□□□□ -1.52
AGRN-208ENST00000479707 KRTAP9-4Q9BYQ2 154 aa5.51□□□□□ -1.53
AGRN-208ENST00000479707 KRTAP5-2Q701N4 177 aa5.42□□□□□ -1.54
AGRN-208ENST00000479707 KRTAP6-2Q3LI66 62 aa5.39□□□□□ -1.55
AGRN-208ENST00000479707 KRTAP5-7Q6L8G8 165 aa5.31□□□□□ -1.56
AGRN-208ENST00000479707 KRTAP4-11Q9BYQ6 195 aa5.24□□□□□ -1.57
AGRN-208ENST00000479707 MT3P25713 68 aa5.23□□□□□ -1.57
AGRN-208ENST00000479707 LUZP6Q538Z0 58 aa5.06□□□□□ -1.6
AGRN-208ENST00000479707 KRTAP5-8O75690 187 aa5.05□□□□□ -1.6
AGRN-208ENST00000479707 OBSCNQ5VST9 7968 aa5.03□□□□□ -1.6
AGRN-208ENST00000479707 KRTAP5-1Q6L8H4 278 aa4.83□□□□□ -1.64
AGRN-208ENST00000479707 KRTAP9-9Q9BYP9 154 aa4.76□□□□□ -1.65
AGRN-208ENST00000479707 MUC5ACP98088 5654 aa4.72□□□□□ -1.65
AGRN-208ENST00000479707 LCE1EQ5T753 118 aa4.69□□□□□ -1.66
AGRN-208ENST00000479707 MUC5BQ9HC84 5762 aaPredicted RBP4.65□□□□□ -1.66
AGRN-208ENST00000479707 AHNAKQ09666 5890 aaKnown RBP4.59□□□□□ -1.67
AGRN-208ENST00000479707 NDUFAF8A1L188 74 aa4.56□□□□□ -1.68
AGRN-208ENST00000479707 LCE3DQ9BYE3 92 aa4.5□□□□□ -1.69
AGRN-208ENST00000479707 LCE1BQ5T7P3 118 aa4.49□□□□□ -1.69
AGRN-208ENST00000479707 KRTAP4-2Q9BYR5 136 aa4.44□□□□□ -1.7
AGRN-208ENST00000479707 LCE1CQ5T751 118 aa4.36□□□□□ -1.71
AGRN-208ENST00000479707 LCE3EQ5T5B0 92 aa4.28□□□□□ -1.72
AGRN-208ENST00000479707 KRTAP4-12Q9BQ66 201 aa4□□□□□ -1.77
AGRN-208ENST00000479707 A0A0A0MQY5 61 aa3.98□□□□□ -1.77
AGRN-208ENST00000479707 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.98□□□□□ -1.77
AGRN-208ENST00000479707 KRTAP5-11Q6L8G4 156 aa3.92□□□□□ -1.78
AGRN-208ENST00000479707 INE1O15225 51 aa3.81□□□□□ -1.8
AGRN-208ENST00000479707 LCE1FQ5T754 118 aa3.74□□□□□ -1.81
AGRN-208ENST00000479707 KRTAP21-2Q3LI59 83 aa3.73□□□□□ -1.81
AGRN-208ENST00000479707 KRTAP4-4Q9BYR3 166 aa3.45□□□□□ -1.86
AGRN-208ENST00000479707 PHGR1C9JFL3 82 aa3.39□□□□□ -1.87
AGRN-208ENST00000479707 PRM1P04553 51 aa3.39□□□□□ -1.87
AGRN-208ENST00000479707 H3BS24 57 aa3.27□□□□□ -1.89
AGRN-208ENST00000479707 MUC19Q7Z5P9 8384 aa3.06□□□□□ -1.92
AGRN-208ENST00000479707 KRTAP21-1Q3LI58 79 aa2.44□□□□□ -2.02
AGRN-208ENST00000479707 MUC16Q8WXI7 14507 aa2.23□□□□□ -2.05
Retrieved 78 of 20,778 RNA–protein pairs in 604.8 ms