RNA–Protein interactions for RNA: ENST00000478085.5

SGSM3-209, Transcript of small G protein signaling modulator 3, humanhuman

TSL 2

Gene SGSM3, Length 4,218 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGSM3-209ENST00000478085 KRTAP19-4Q3LI73 84 aa4.09□□□□□ -1.75
SGSM3-209ENST00000478085 LCE2DQ5TA82 110 aaPredicted RBP4.05□□□□□ -1.76
SGSM3-209ENST00000478085 KMT2DO14686 5537 aa4.05□□□□□ -1.76
SGSM3-209ENST00000478085 MT1EP04732 61 aa4.04□□□□□ -1.76
SGSM3-209ENST00000478085 MT1LQ93083 61 aa4.03□□□□□ -1.76
SGSM3-209ENST00000478085 KRTAP19-3Q7Z4W3 81 aa4.01□□□□□ -1.77
SGSM3-209ENST00000478085 OBSCNQ5VST9 7968 aa4.01□□□□□ -1.77
SGSM3-209ENST00000478085 SPRR2DP22532 72 aa4□□□□□ -1.77
SGSM3-209ENST00000478085 DSTQ03001 7570 aaKnown RBP3.97□□□□□ -1.77
SGSM3-209ENST00000478085 KRTAP19-7Q3SYF9 63 aa3.95□□□□□ -1.78
SGSM3-209ENST00000478085 LCE3BQ5TA77 95 aa3.91□□□□□ -1.78
SGSM3-209ENST00000478085 KRTAP4-3Q9BYR4 195 aa3.91□□□□□ -1.78
SGSM3-209ENST00000478085 MT1MQ8N339 61 aa3.87□□□□□ -1.79
SGSM3-209ENST00000478085 FCGBPQ9Y6R7 5405 aaPredicted RBP3.86□□□□□ -1.79
SGSM3-209ENST00000478085 SSPOA2VEC9 5147 aa3.84□□□□□ -1.8
SGSM3-209ENST00000478085 LOC100996750A0A140TA64 210 aa3.83□□□□□ -1.8
SGSM3-209ENST00000478085 SYNE2Q8WXH0 6885 aaKnown RBP3.81□□□□□ -1.8
SGSM3-209ENST00000478085 KRTAP9-7A8MTY7 169 aa3.8□□□□□ -1.8
SGSM3-209ENST00000478085 KRTAP12-4P60329 112 aa3.77□□□□□ -1.81
SGSM3-209ENST00000478085 MACF1Q9UPN3 7388 aaKnown RBP3.72□□□□□ -1.81
SGSM3-209ENST00000478085 MUC12Q9UKN1 5478 aa3.72□□□□□ -1.81
SGSM3-209ENST00000478085 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.68□□□□□ -1.82
SGSM3-209ENST00000478085 KRTAP2-3P0C7H8 128 aa3.68□□□□□ -1.82
SGSM3-209ENST00000478085 KRTAP2-4Q9BYR9 128 aa3.68□□□□□ -1.82
SGSM3-209ENST00000478085 KRTAP2-1Q9BYU5 128 aa3.68□□□□□ -1.82
SGSM3-209ENST00000478085 KRTAP9-6A8MVA2 160 aa3.62□□□□□ -1.83
SGSM3-209ENST00000478085 MT4P47944 62 aa3.62□□□□□ -1.83
SGSM3-209ENST00000478085 LCE1AQ5T7P2 110 aa3.6□□□□□ -1.83
SGSM3-209ENST00000478085 LCE3DQ9BYE3 92 aa3.6□□□□□ -1.83
SGSM3-209ENST00000478085 KRTAP6-3Q3LI67 103 aa3.59□□□□□ -1.83
SGSM3-209ENST00000478085 LCE5AQ5TCM9 118 aa3.59□□□□□ -1.83
SGSM3-209ENST00000478085 LCE3EQ5T5B0 92 aa3.5□□□□□ -1.85
SGSM3-209ENST00000478085 MDN1Q9NU22 5596 aa3.49□□□□□ -1.85
SGSM3-209ENST00000478085 MT1AP04731 61 aa3.48□□□□□ -1.85
SGSM3-209ENST00000478085 MT3P25713 68 aa3.47□□□□□ -1.85
SGSM3-209ENST00000478085 KRTAP20-1Q3LI63 56 aa3.47□□□□□ -1.85
SGSM3-209ENST00000478085 KRTAP4-9Q9BYQ8 210 aa3.46□□□□□ -1.86
SGSM3-209ENST00000478085 KRTAP6-1Q3LI64 71 aa3.43□□□□□ -1.86
SGSM3-209ENST00000478085 KRTAP5-9P26371 169 aa3.35□□□□□ -1.87
SGSM3-209ENST00000478085 KRTAP6-2Q3LI66 62 aa3.29□□□□□ -1.88
SGSM3-209ENST00000478085 KRTAP2-2Q9BYT5 123 aa3.29□□□□□ -1.88
SGSM3-209ENST00000478085 NEBP20929 6669 aa3.27□□□□□ -1.89
SGSM3-209ENST00000478085 LCE1DQ5T752 114 aa3.27□□□□□ -1.89
SGSM3-209ENST00000478085 KRTAP9-4Q9BYQ2 154 aa3.25□□□□□ -1.89
SGSM3-209ENST00000478085 LCE1BQ5T7P3 118 aa3.24□□□□□ -1.89
SGSM3-209ENST00000478085 PRM1P04553 51 aa3.23□□□□□ -1.89
SGSM3-209ENST00000478085 LCE4AQ5TA78 99 aa3.19□□□□□ -1.9
SGSM3-209ENST00000478085 KRTAP4-6Q9BYQ5 205 aa3.07□□□□□ -1.92
SGSM3-209ENST00000478085 GPR98Q8WXG9 6306 aa3.01□□□□□ -1.93
SGSM3-209ENST00000478085 KRTAP20-2Q3LI61 65 aa2.93□□□□□ -1.94
SGSM3-209ENST00000478085 KRTAP5-5Q701N2 237 aaPredicted RBP2.85□□□□□ -1.95
SGSM3-209ENST00000478085 MUC19Q7Z5P9 8384 aa2.83□□□□□ -1.96
SGSM3-209ENST00000478085 KRTAP5-4Q6L8H1 288 aa2.7□□□□□ -1.98
SGSM3-209ENST00000478085 LCE1EQ5T753 118 aa2.69□□□□□ -1.98
SGSM3-209ENST00000478085 MUC5ACP98088 5654 aa2.67□□□□□ -1.98
SGSM3-209ENST00000478085 HMCN1Q96RW7 5635 aa2.66□□□□□ -1.98
SGSM3-209ENST00000478085 KRTAP9-9Q9BYP9 154 aa2.62□□□□□ -1.99
SGSM3-209ENST00000478085 KRTAP4-11Q9BYQ6 195 aa2.62□□□□□ -1.99
SGSM3-209ENST00000478085 LCE1CQ5T751 118 aa2.59□□□□□ -2
SGSM3-209ENST00000478085 LCE1FQ5T754 118 aa2.59□□□□□ -2
SGSM3-209ENST00000478085 KRTAP5-3Q6L8H2 238 aa2.5□□□□□ -2.01
SGSM3-209ENST00000478085 KRTAP4-12Q9BQ66 201 aa2.45□□□□□ -2.02
SGSM3-209ENST00000478085 KRTAP4-2Q9BYR5 136 aa2.45□□□□□ -2.02
SGSM3-209ENST00000478085 KRTAP4-4Q9BYR3 166 aa2.41□□□□□ -2.02
SGSM3-209ENST00000478085 AHNAK2Q8IVF2 5795 aa2.38□□□□□ -2.03
SGSM3-209ENST00000478085 KRTAP5-2Q701N4 177 aa2.38□□□□□ -2.03
SGSM3-209ENST00000478085 KRTAP5-8O75690 187 aa2.31□□□□□ -2.04
SGSM3-209ENST00000478085 MUC5BQ9HC84 5762 aaPredicted RBP2.21□□□□□ -2.06
SGSM3-209ENST00000478085 KRTAP5-1Q6L8H4 278 aa2.14□□□□□ -2.07
SGSM3-209ENST00000478085 KRTAP5-10Q6L8G5 202 aa2.13□□□□□ -2.07
SGSM3-209ENST00000478085 AHNAKQ09666 5890 aaKnown RBP2.13□□□□□ -2.07
SGSM3-209ENST00000478085 KRTAP5-7Q6L8G8 165 aa2.03□□□□□ -2.08
SGSM3-209ENST00000478085 KRTAP5-11Q6L8G4 156 aa1.94□□□□□ -2.1
SGSM3-209ENST00000478085 KRTAP21-2Q3LI59 83 aa1.94□□□□□ -2.1
SGSM3-209ENST00000478085 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.83□□□□□ -2.12
SGSM3-209ENST00000478085 KRTAP21-1Q3LI58 79 aa1.8□□□□□ -2.12
SGSM3-209ENST00000478085 PHGR1C9JFL3 82 aa1.77□□□□□ -2.13
SGSM3-209ENST00000478085 MUC16Q8WXI7 14507 aa1.14□□□□□ -2.23
Retrieved 78 of 20,778 RNA–protein pairs in 11.9 ms