RNA–Protein interactions for RNA: ENST00000478015.5

LCLAT1-209, Transcript of lysocardiolipin acyltransferase 1, humanhuman

TSL 2

Gene LCLAT1, Length 1,862 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCLAT1-209ENST00000478015 KRTAP4-9Q9BYQ8 210 aa3.98□□□□□ -1.77
LCLAT1-209ENST00000478015 SPRR2DP22532 72 aa3.96□□□□□ -1.78
LCLAT1-209ENST00000478015 DSTQ03001 7570 aaKnown RBP3.95□□□□□ -1.78
LCLAT1-209ENST00000478015 KTN1-AS1Q86SY8 53 aa3.94□□□□□ -1.78
LCLAT1-209ENST00000478015 KRTAP2-2Q9BYT5 123 aa3.92□□□□□ -1.78
LCLAT1-209ENST00000478015 KRTAP2-1Q9BYU5 128 aa3.92□□□□□ -1.78
LCLAT1-209ENST00000478015 K7ERS5 55 aa3.92□□□□□ -1.78
LCLAT1-209ENST00000478015 H3BS24 57 aa3.9□□□□□ -1.79
LCLAT1-209ENST00000478015 KRTAP19-7Q3SYF9 63 aa3.89□□□□□ -1.79
LCLAT1-209ENST00000478015 A0A0D9SG42 100 aa3.88□□□□□ -1.79
LCLAT1-209ENST00000478015 CAMK2N1Q7Z7J9 78 aa3.87□□□□□ -1.79
LCLAT1-209ENST00000478015 KRTAP12-1P59990 96 aa3.83□□□□□ -1.8
LCLAT1-209ENST00000478015 MT1EP04732 61 aa3.82□□□□□ -1.8
LCLAT1-209ENST00000478015 LCE5AQ5TCM9 118 aa3.81□□□□□ -1.8
LCLAT1-209ENST00000478015 SPINT4Q6UDR6 99 aa3.79□□□□□ -1.8
LCLAT1-209ENST00000478015 KRTAP19-3Q7Z4W3 81 aa3.77□□□□□ -1.81
LCLAT1-209ENST00000478015 ROMO1P60602 79 aa3.75□□□□□ -1.81
LCLAT1-209ENST00000478015 KRTAP19-5Q3LI72 72 aa3.75□□□□□ -1.81
LCLAT1-209ENST00000478015 PRAC1Q96KF2 57 aa3.75□□□□□ -1.81
LCLAT1-209ENST00000478015 KRTAP4-11Q9BYQ6 195 aa3.71□□□□□ -1.82
LCLAT1-209ENST00000478015 C10orf95Q9H7T3 257 aa3.69□□□□□ -1.82
LCLAT1-209ENST00000478015 KRTAP25-1Q3LHN0 102 aa3.66□□□□□ -1.82
LCLAT1-209ENST00000478015 LCE3AQ5TA76 89 aa3.66□□□□□ -1.82
LCLAT1-209ENST00000478015 MT1LQ93083 61 aa3.65□□□□□ -1.82
LCLAT1-209ENST00000478015 MT1GP13640 62 aa3.64□□□□□ -1.83
LCLAT1-209ENST00000478015 KRTAP4-3Q9BYR4 195 aa3.64□□□□□ -1.83
LCLAT1-209ENST00000478015 MT1MQ8N339 61 aa3.63□□□□□ -1.83
LCLAT1-209ENST00000478015 A0A0A0MQY5 61 aa3.6□□□□□ -1.83
LCLAT1-209ENST00000478015 HMCN1Q96RW7 5635 aa3.56□□□□□ -1.84
LCLAT1-209ENST00000478015 GPR98Q8WXG9 6306 aa3.56□□□□□ -1.84
LCLAT1-209ENST00000478015 TNP1P09430 55 aa3.55□□□□□ -1.84
LCLAT1-209ENST00000478015 PP632Q6XCG6 107 aa3.54□□□□□ -1.84
LCLAT1-209ENST00000478015 MT4P47944 62 aa3.52□□□□□ -1.85
LCLAT1-209ENST00000478015 KRTAP5-4Q6L8H1 288 aa3.48□□□□□ -1.85
LCLAT1-209ENST00000478015 KRTAP12-3P60328 96 aa3.47□□□□□ -1.85
LCLAT1-209ENST00000478015 LCE4AQ5TA78 99 aa3.46□□□□□ -1.86
LCLAT1-209ENST00000478015 KRTAP23-1A1A580 65 aa3.39□□□□□ -1.87
LCLAT1-209ENST00000478015 AHNAK2Q8IVF2 5795 aa3.39□□□□□ -1.87
LCLAT1-209ENST00000478015 KRTAP5-5Q701N2 237 aaPredicted RBP3.37□□□□□ -1.87
LCLAT1-209ENST00000478015 KRTAP5-10Q6L8G5 202 aa3.32□□□□□ -1.88
LCLAT1-209ENST00000478015 SYNE1Q8NF91 8797 aaKnown RBP3.31□□□□□ -1.88
LCLAT1-209ENST00000478015 KRTAP20-2Q3LI61 65 aa3.28□□□□□ -1.88
LCLAT1-209ENST00000478015 KRTAP15-1Q3LI76 137 aa3.26□□□□□ -1.89
LCLAT1-209ENST00000478015 NDUFAF8A1L188 74 aa3.22□□□□□ -1.89
LCLAT1-209ENST00000478015 LCE3CQ5T5A8 94 aa3.21□□□□□ -1.9
LCLAT1-209ENST00000478015 SPRR5A0A1B0GTR4 108 aa3.2□□□□□ -1.9
LCLAT1-209ENST00000478015 KRTAP12-4P60329 112 aa3.17□□□□□ -1.9
LCLAT1-209ENST00000478015 LUZP6Q538Z0 58 aa3.16□□□□□ -1.9
LCLAT1-209ENST00000478015 KRTAP9-6A8MVA2 160 aa3.15□□□□□ -1.91
LCLAT1-209ENST00000478015 KRTAP5-7Q6L8G8 165 aa3.15□□□□□ -1.91
LCLAT1-209ENST00000478015 KRTAP19-4Q3LI73 84 aa3.13□□□□□ -1.91
LCLAT1-209ENST00000478015 KRTAP6-1Q3LI64 71 aa3.11□□□□□ -1.91
LCLAT1-209ENST00000478015 OBSCNQ5VST9 7968 aa3.09□□□□□ -1.91
LCLAT1-209ENST00000478015 MT1AP04731 61 aa3.07□□□□□ -1.92
LCLAT1-209ENST00000478015 KRTAP5-2Q701N4 177 aa3.05□□□□□ -1.92
LCLAT1-209ENST00000478015 KRTAP6-2Q3LI66 62 aa2.96□□□□□ -1.93
LCLAT1-209ENST00000478015 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.96□□□□□ -1.94
LCLAT1-209ENST00000478015 KRTAP5-8O75690 187 aa2.92□□□□□ -1.94
LCLAT1-209ENST00000478015 MUC5BQ9HC84 5762 aaPredicted RBP2.82□□□□□ -1.96
LCLAT1-209ENST00000478015 MUC5ACP98088 5654 aa2.79□□□□□ -1.96
LCLAT1-209ENST00000478015 MT3P25713 68 aa2.77□□□□□ -1.97
LCLAT1-209ENST00000478015 KRTAP5-1Q6L8H4 278 aa2.77□□□□□ -1.97
LCLAT1-209ENST00000478015 AHNAKQ09666 5890 aaKnown RBP2.75□□□□□ -1.97
LCLAT1-209ENST00000478015 INE1O15225 51 aa2.62□□□□□ -1.99
LCLAT1-209ENST00000478015 LCE1EQ5T753 118 aa2.56□□□□□ -2
LCLAT1-209ENST00000478015 LCE1BQ5T7P3 118 aa2.45□□□□□ -2.02
LCLAT1-209ENST00000478015 KRTAP5-11Q6L8G4 156 aa2.43□□□□□ -2.02
LCLAT1-209ENST00000478015 LCE1CQ5T751 118 aa2.4□□□□□ -2.03
LCLAT1-209ENST00000478015 KRTAP4-4Q9BYR3 166 aa2.4□□□□□ -2.03
LCLAT1-209ENST00000478015 LCE3DQ9BYE3 92 aa2.28□□□□□ -2.04
LCLAT1-209ENST00000478015 LCE3EQ5T5B0 92 aa2.19□□□□□ -2.06
LCLAT1-209ENST00000478015 KRTAP21-2Q3LI59 83 aa2.07□□□□□ -2.08
LCLAT1-209ENST00000478015 LCE1FQ5T754 118 aa2.06□□□□□ -2.08
LCLAT1-209ENST00000478015 PRM1P04553 51 aa1.95□□□□□ -2.1
LCLAT1-209ENST00000478015 PHGR1C9JFL3 82 aa1.9□□□□□ -2.1
LCLAT1-209ENST00000478015 MUC19Q7Z5P9 8384 aa1.89□□□□□ -2.11
LCLAT1-209ENST00000478015 KRTAP21-1Q3LI58 79 aa1.4□□□□□ -2.19
LCLAT1-209ENST00000478015 MUC16Q8WXI7 14507 aa1.23□□□□□ -2.21
Retrieved 78 of 20,778 RNA–protein pairs in 93 ms