RNA–Protein interactions for RNA: ENST00000477561.5

HDAC6-221, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-221ENST00000477561 KMT2DO14686 5537 aa3.44□□□□□ -1.86
HDAC6-221ENST00000477561 KRTAP5-9P26371 169 aa3.42□□□□□ -1.86
HDAC6-221ENST00000477561 CAMK2N1Q7Z7J9 78 aa3.4□□□□□ -1.87
HDAC6-221ENST00000477561 GPR98Q8WXG9 6306 aa3.38□□□□□ -1.87
HDAC6-221ENST00000477561 SPRR2FQ96RM1 72 aa3.37□□□□□ -1.87
HDAC6-221ENST00000477561 MDN1Q9NU22 5596 aa3.37□□□□□ -1.87
HDAC6-221ENST00000477561 KRTAP8-1Q8IUC2 63 aa3.36□□□□□ -1.87
HDAC6-221ENST00000477561 KRTAP10-7P60409 375 aaPredicted RBP3.34□□□□□ -1.87
HDAC6-221ENST00000477561 ROMO1P60602 79 aa3.34□□□□□ -1.87
HDAC6-221ENST00000477561 SPRR2EP22531 72 aa3.31□□□□□ -1.88
HDAC6-221ENST00000477561 SPRR2BP35325 72 aa3.31□□□□□ -1.88
HDAC6-221ENST00000477561 SPRR2AP35326 72 aa3.31□□□□□ -1.88
HDAC6-221ENST00000477561 KRTAP10-12P60413 245 aa3.28□□□□□ -1.88
HDAC6-221ENST00000477561 C10orf95Q9H7T3 257 aa3.27□□□□□ -1.89
HDAC6-221ENST00000477561 LCE1AQ5T7P2 110 aa3.26□□□□□ -1.89
HDAC6-221ENST00000477561 KRTAP2-3P0C7H8 128 aa3.25□□□□□ -1.89
HDAC6-221ENST00000477561 KRTAP2-4Q9BYR9 128 aa3.25□□□□□ -1.89
HDAC6-221ENST00000477561 KRTAP25-1Q3LHN0 102 aa3.24□□□□□ -1.89
HDAC6-221ENST00000477561 TNP1P09430 55 aa3.23□□□□□ -1.89
HDAC6-221ENST00000477561 PRAC1Q96KF2 57 aa3.21□□□□□ -1.9
HDAC6-221ENST00000477561 SPRR2DP22532 72 aa3.2□□□□□ -1.9
HDAC6-221ENST00000477561 KRTAP5-3Q6L8H2 238 aa3.2□□□□□ -1.9
HDAC6-221ENST00000477561 PP632Q6XCG6 107 aa3.14□□□□□ -1.91
HDAC6-221ENST00000477561 KRTAP2-2Q9BYT5 123 aa3.14□□□□□ -1.91
HDAC6-221ENST00000477561 KRTAP2-1Q9BYU5 128 aa3.14□□□□□ -1.91
HDAC6-221ENST00000477561 KRTAP19-7Q3SYF9 63 aa3.1□□□□□ -1.91
HDAC6-221ENST00000477561 LUZP6Q538Z0 58 aa3.08□□□□□ -1.92
HDAC6-221ENST00000477561 MT1EP04732 61 aa3.07□□□□□ -1.92
HDAC6-221ENST00000477561 KRTAP19-5Q3LI72 72 aa3.05□□□□□ -1.92
HDAC6-221ENST00000477561 LCE3AQ5TA76 89 aa3.05□□□□□ -1.92
HDAC6-221ENST00000477561 KRTAP19-3Q7Z4W3 81 aa3.04□□□□□ -1.92
HDAC6-221ENST00000477561 DSTQ03001 7570 aaKnown RBP3.02□□□□□ -1.93
HDAC6-221ENST00000477561 MT1GP13640 62 aa2.96□□□□□ -1.94
HDAC6-221ENST00000477561 KRTAP12-3P60328 96 aa2.95□□□□□ -1.94
HDAC6-221ENST00000477561 MT1LQ93083 61 aa2.94□□□□□ -1.94
HDAC6-221ENST00000477561 MT3P25713 68 aa2.93□□□□□ -1.94
HDAC6-221ENST00000477561 MT1MQ8N339 61 aa2.93□□□□□ -1.94
HDAC6-221ENST00000477561 NDUFAF8A1L188 74 aa2.92□□□□□ -1.94
HDAC6-221ENST00000477561 KRTAP4-3Q9BYR4 195 aa2.9□□□□□ -1.95
HDAC6-221ENST00000477561 AHNAK2Q8IVF2 5795 aa2.82□□□□□ -1.96
HDAC6-221ENST00000477561 MT4P47944 62 aa2.82□□□□□ -1.96
HDAC6-221ENST00000477561 SPRR5A0A1B0GTR4 108 aa2.79□□□□□ -1.96
HDAC6-221ENST00000477561 KRTAP5-10Q6L8G5 202 aa2.77□□□□□ -1.97
HDAC6-221ENST00000477561 KRTAP5-7Q6L8G8 165 aa2.77□□□□□ -1.97
HDAC6-221ENST00000477561 HMCN1Q96RW7 5635 aa2.77□□□□□ -1.97
HDAC6-221ENST00000477561 LCE3CQ5T5A8 94 aa2.75□□□□□ -1.97
HDAC6-221ENST00000477561 KRTAP5-4Q6L8H1 288 aa2.75□□□□□ -1.97
HDAC6-221ENST00000477561 KRTAP5-5Q701N2 237 aaPredicted RBP2.67□□□□□ -1.98
HDAC6-221ENST00000477561 LCE1FQ5T754 118 aa2.66□□□□□ -1.98
HDAC6-221ENST00000477561 SYNE1Q8NF91 8797 aaKnown RBP2.66□□□□□ -1.98
HDAC6-221ENST00000477561 LCE1EQ5T753 118 aa2.65□□□□□ -1.99
HDAC6-221ENST00000477561 KRTAP20-2Q3LI61 65 aa2.61□□□□□ -1.99
HDAC6-221ENST00000477561 AHNAKQ09666 5890 aaKnown RBP2.61□□□□□ -1.99
HDAC6-221ENST00000477561 KRTAP12-4P60329 112 aa2.6□□□□□ -1.99
HDAC6-221ENST00000477561 KRTAP5-11Q6L8G4 156 aa2.59□□□□□ -1.99
HDAC6-221ENST00000477561 KRTAP9-6A8MVA2 160 aa2.55□□□□□ -2
HDAC6-221ENST00000477561 MUC5BQ9HC84 5762 aaPredicted RBP2.52□□□□□ -2.01
HDAC6-221ENST00000477561 MT1AP04731 61 aa2.5□□□□□ -2.01
HDAC6-221ENST00000477561 KRTAP6-1Q3LI64 71 aa2.5□□□□□ -2.01
HDAC6-221ENST00000477561 INE1O15225 51 aa2.49□□□□□ -2.01
HDAC6-221ENST00000477561 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.49□□□□□ -2.01
HDAC6-221ENST00000477561 KRTAP5-2Q701N4 177 aa2.42□□□□□ -2.02
HDAC6-221ENST00000477561 MUC5ACP98088 5654 aa2.42□□□□□ -2.02
HDAC6-221ENST00000477561 KRTAP6-2Q3LI66 62 aa2.39□□□□□ -2.03
HDAC6-221ENST00000477561 OBSCNQ5VST9 7968 aa2.31□□□□□ -2.04
HDAC6-221ENST00000477561 KRTAP5-8O75690 187 aa2.3□□□□□ -2.04
HDAC6-221ENST00000477561 LCE3EQ5T5B0 92 aa2.24□□□□□ -2.05
HDAC6-221ENST00000477561 KRTAP5-1Q6L8H4 278 aa2.17□□□□□ -2.06
HDAC6-221ENST00000477561 LCE3DQ9BYE3 92 aa2.07□□□□□ -2.08
HDAC6-221ENST00000477561 KRTAP4-4Q9BYR3 166 aa2.05□□□□□ -2.08
HDAC6-221ENST00000477561 LCE1BQ5T7P3 118 aa2□□□□□ -2.09
HDAC6-221ENST00000477561 LCE1CQ5T751 118 aa1.92□□□□□ -2.1
HDAC6-221ENST00000477561 PRM1P04553 51 aa1.72□□□□□ -2.13
HDAC6-221ENST00000477561 KRTAP21-2Q3LI59 83 aa1.64□□□□□ -2.15
HDAC6-221ENST00000477561 PHGR1C9JFL3 82 aa1.63□□□□□ -2.15
HDAC6-221ENST00000477561 MUC19Q7Z5P9 8384 aa1.44□□□□□ -2.18
HDAC6-221ENST00000477561 KRTAP21-1Q3LI58 79 aa1.24□□□□□ -2.21
HDAC6-221ENST00000477561 MUC16Q8WXI7 14507 aa0.99□□□□□ -2.25
Retrieved 78 of 20,778 RNA–protein pairs in 123.3 ms