RNA–Protein interactions for RNA: ENST00000477548.5

DFFB-209, Transcript of DNA fragmentation factor subunit beta, humanhuman

TSL 1 (best)

Gene DFFB, Length 2,923 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DFFB-209ENST00000477548 MT1LQ93083 61 aa4.46□□□□□ -1.69
DFFB-209ENST00000477548 MUC12Q9UKN1 5478 aa4.46□□□□□ -1.7
DFFB-209ENST00000477548 KRTAP2-2Q9BYT5 123 aa4.44□□□□□ -1.7
DFFB-209ENST00000477548 MT1EP04732 61 aa4.39□□□□□ -1.71
DFFB-209ENST00000477548 KRTAP19-6Q3LI70 58 aa4.39□□□□□ -1.71
DFFB-209ENST00000477548 KRTAP12-4P60329 112 aa4.37□□□□□ -1.71
DFFB-209ENST00000477548 DSTQ03001 7570 aaKnown RBP4.33□□□□□ -1.72
DFFB-209ENST00000477548 LCE1AQ5T7P2 110 aa4.32□□□□□ -1.72
DFFB-209ENST00000477548 LOC100996750A0A140TA64 210 aa4.32□□□□□ -1.72
DFFB-209ENST00000477548 MACF1Q9UPN3 7388 aaKnown RBP4.32□□□□□ -1.72
DFFB-209ENST00000477548 KRTAP6-3Q3LI67 103 aa4.27□□□□□ -1.73
DFFB-209ENST00000477548 MT1GP13640 62 aa4.25□□□□□ -1.73
DFFB-209ENST00000477548 SYNE2Q8WXH0 6885 aaKnown RBP4.25□□□□□ -1.73
DFFB-209ENST00000477548 KRTAP4-3Q9BYR4 195 aa4.25□□□□□ -1.73
DFFB-209ENST00000477548 CRCT1Q9UGL9 99 aa4.24□□□□□ -1.73
DFFB-209ENST00000477548 LCE1EQ5T753 118 aa4.21□□□□□ -1.74
DFFB-209ENST00000477548 MDN1Q9NU22 5596 aa4.14□□□□□ -1.75
DFFB-209ENST00000477548 KRTAP9-6A0A140TA67 174 aa4.11□□□□□ -1.75
DFFB-209ENST00000477548 MT1MQ8N339 61 aa4.09□□□□□ -1.75
DFFB-209ENST00000477548 SPRR2FQ96RM1 72 aa4.08□□□□□ -1.76
DFFB-209ENST00000477548 LCE3BQ5TA77 95 aa4.06□□□□□ -1.76
DFFB-209ENST00000477548 KRTAP19-3Q7Z4W3 81 aa4.06□□□□□ -1.76
DFFB-209ENST00000477548 KRTAP9-2Q9BYQ4 174 aa4.06□□□□□ -1.76
DFFB-209ENST00000477548 KRTAP4-9Q9BYQ8 210 aa4.04□□□□□ -1.76
DFFB-209ENST00000477548 LCE1DQ5T752 114 aa4.01□□□□□ -1.77
DFFB-209ENST00000477548 LCE5AQ5TCM9 118 aa3.96□□□□□ -1.78
DFFB-209ENST00000477548 SYNE1Q8NF91 8797 aaKnown RBP3.95□□□□□ -1.78
DFFB-209ENST00000477548 MT1AP04731 61 aa3.93□□□□□ -1.78
DFFB-209ENST00000477548 PRM1P04553 51 aa3.92□□□□□ -1.78
DFFB-209ENST00000477548 KRTAP9-7A8MTY7 169 aa3.91□□□□□ -1.78
DFFB-209ENST00000477548 LCE3DQ9BYE3 92 aa3.91□□□□□ -1.78
DFFB-209ENST00000477548 LCE3EQ5T5B0 92 aa3.89□□□□□ -1.79
DFFB-209ENST00000477548 LCE1FQ5T754 118 aa3.88□□□□□ -1.79
DFFB-209ENST00000477548 KRTAP5-5Q701N2 237 aaPredicted RBP3.85□□□□□ -1.79
DFFB-209ENST00000477548 KRTAP6-1Q3LI64 71 aa3.81□□□□□ -1.8
DFFB-209ENST00000477548 KRTAP5-9P26371 169 aa3.77□□□□□ -1.81
DFFB-209ENST00000477548 SPRR2EP22531 72 aa3.73□□□□□ -1.81
DFFB-209ENST00000477548 SPRR2BP35325 72 aa3.73□□□□□ -1.81
DFFB-209ENST00000477548 SPRR2AP35326 72 aa3.73□□□□□ -1.81
DFFB-209ENST00000477548 OBSCNQ5VST9 7968 aa3.72□□□□□ -1.81
DFFB-209ENST00000477548 KRTAP6-2Q3LI66 62 aa3.67□□□□□ -1.82
DFFB-209ENST00000477548 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.63□□□□□ -1.83
DFFB-209ENST00000477548 SPRR2DP22532 72 aa3.56□□□□□ -1.84
DFFB-209ENST00000477548 KRTAP9-4Q9BYQ2 154 aa3.47□□□□□ -1.85
DFFB-209ENST00000477548 NEBP20929 6669 aa3.43□□□□□ -1.86
DFFB-209ENST00000477548 KRTAP4-6Q9BYQ5 205 aa3.37□□□□□ -1.87
DFFB-209ENST00000477548 MT3P25713 68 aa3.34□□□□□ -1.87
DFFB-209ENST00000477548 MUC19Q7Z5P9 8384 aa3.27□□□□□ -1.89
DFFB-209ENST00000477548 MT4P47944 62 aa3.23□□□□□ -1.89
DFFB-209ENST00000477548 KRTAP5-4Q6L8H1 288 aa3.21□□□□□ -1.9
DFFB-209ENST00000477548 HMCN1Q96RW7 5635 aa3.18□□□□□ -1.9
DFFB-209ENST00000477548 KRTAP9-9Q9BYP9 154 aa3.11□□□□□ -1.91
DFFB-209ENST00000477548 KRTAP4-12Q9BQ66 201 aa3.1□□□□□ -1.91
DFFB-209ENST00000477548 KRTAP20-2Q3LI61 65 aa3.07□□□□□ -1.92
DFFB-209ENST00000477548 LCE4AQ5TA78 99 aa3□□□□□ -1.93
DFFB-209ENST00000477548 KRTAP5-2Q701N4 177 aa2.97□□□□□ -1.93
DFFB-209ENST00000477548 KRTAP4-11Q9BYQ6 195 aa2.93□□□□□ -1.94
DFFB-209ENST00000477548 KRTAP5-3Q6L8H2 238 aa2.92□□□□□ -1.94
DFFB-209ENST00000477548 KRTAP20-1Q3LI63 56 aa2.89□□□□□ -1.95
DFFB-209ENST00000477548 MUC5ACP98088 5654 aa2.87□□□□□ -1.95
DFFB-209ENST00000477548 KRTAP5-10Q6L8G5 202 aa2.77□□□□□ -1.97
DFFB-209ENST00000477548 LCE1CQ5T751 118 aa2.77□□□□□ -1.97
DFFB-209ENST00000477548 LCE1BQ5T7P3 118 aa2.77□□□□□ -1.97
DFFB-209ENST00000477548 KRTAP4-2Q9BYR5 136 aa2.65□□□□□ -1.98
DFFB-209ENST00000477548 KRTAP5-1Q6L8H4 278 aa2.64□□□□□ -1.99
DFFB-209ENST00000477548 GPR98Q8WXG9 6306 aa2.56□□□□□ -2
DFFB-209ENST00000477548 AHNAK2Q8IVF2 5795 aa2.54□□□□□ -2
DFFB-209ENST00000477548 KRTAP5-8O75690 187 aa2.48□□□□□ -2.01
DFFB-209ENST00000477548 KRTAP21-1Q3LI58 79 aa2.46□□□□□ -2.02
DFFB-209ENST00000477548 MUC5BQ9HC84 5762 aaPredicted RBP2.44□□□□□ -2.02
DFFB-209ENST00000477548 KRTAP21-2Q3LI59 83 aa2.41□□□□□ -2.02
DFFB-209ENST00000477548 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.34□□□□□ -2.03
DFFB-209ENST00000477548 KRTAP5-7Q6L8G8 165 aa2.32□□□□□ -2.04
DFFB-209ENST00000477548 KRTAP4-4Q9BYR3 166 aa2.3□□□□□ -2.04
DFFB-209ENST00000477548 KRTAP5-11Q6L8G4 156 aa2.15□□□□□ -2.06
DFFB-209ENST00000477548 AHNAKQ09666 5890 aaKnown RBP2.09□□□□□ -2.07
DFFB-209ENST00000477548 PHGR1C9JFL3 82 aa1.89□□□□□ -2.11
DFFB-209ENST00000477548 MUC16Q8WXI7 14507 aa1.27□□□□□ -2.21
Retrieved 78 of 20,778 RNA–protein pairs in 167.8 ms