RNA–Protein interactions for RNA: ENST00000477529.1

SRRT-210, Transcript of serrate, RNA effector molecule, humanhuman

TSL 2

Gene SRRT, Length 540 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-210ENST00000477529 TNP1P09430 55 aa5.16□□□□□ -1.58
SRRT-210ENST00000477529 LCE1DQ5T752 114 aa5.14□□□□□ -1.59
SRRT-210ENST00000477529 LCE3AQ5TA76 89 aa5.13□□□□□ -1.59
SRRT-210ENST00000477529 MIR22HGQ0VDD5 57 aa5.11□□□□□ -1.59
SRRT-210ENST00000477529 Q1T7F1 81 aa5.11□□□□□ -1.59
SRRT-210ENST00000477529 V9GYY9 64 aa5.1□□□□□ -1.59
SRRT-210ENST00000477529 PSPHP1O15172 72 aa5.09□□□□□ -1.59
SRRT-210ENST00000477529 DSTQ03001 7570 aaKnown RBP5.04□□□□□ -1.6
SRRT-210ENST00000477529 MT1GP13640 62 aa5.04□□□□□ -1.6
SRRT-210ENST00000477529 MT1LQ93083 61 aa5.03□□□□□ -1.6
SRRT-210ENST00000477529 KRTAP4-9Q9BYQ8 210 aa5.01□□□□□ -1.61
SRRT-210ENST00000477529 PP632Q6XCG6 107 aa4.99□□□□□ -1.61
SRRT-210ENST00000477529 MT1MQ8N339 61 aa4.99□□□□□ -1.61
SRRT-210ENST00000477529 K7ERS5 55 aa4.96□□□□□ -1.62
SRRT-210ENST00000477529 KRTAP4-2Q9BYR5 136 aa4.94□□□□□ -1.62
SRRT-210ENST00000477529 KRTAP25-1Q3LHN0 102 aa4.93□□□□□ -1.62
SRRT-210ENST00000477529 A6NED7 52 aa4.92□□□□□ -1.62
SRRT-210ENST00000477529 KRTAP12-3P60328 96 aa4.92□□□□□ -1.62
SRRT-210ENST00000477529 RPS28P62857 69 aaKnown RBP4.91□□□□□ -1.62
SRRT-210ENST00000477529 KRTAP4-3Q9BYR4 195 aa4.87□□□□□ -1.63
SRRT-210ENST00000477529 KRTAP4-11Q9BYQ6 195 aa4.8□□□□□ -1.64
SRRT-210ENST00000477529 KRTAP23-1A1A580 65 aa4.75□□□□□ -1.65
SRRT-210ENST00000477529 LCE4AQ5TA78 99 aa4.75□□□□□ -1.65
SRRT-210ENST00000477529 CDC42SE1Q9NRR8 79 aa4.75□□□□□ -1.65
SRRT-210ENST00000477529 KRTAP5-4Q6L8H1 288 aa4.7□□□□□ -1.66
SRRT-210ENST00000477529 MT4P47944 62 aa4.67□□□□□ -1.66
SRRT-210ENST00000477529 ROMO1P60602 79 aa4.67□□□□□ -1.66
SRRT-210ENST00000477529 KRTAP15-1Q3LI76 137 aa4.63□□□□□ -1.67
SRRT-210ENST00000477529 KRTAP19-4Q3LI73 84 aa4.61□□□□□ -1.67
SRRT-210ENST00000477529 HMCN1Q96RW7 5635 aa4.6□□□□□ -1.67
SRRT-210ENST00000477529 KRTAP5-5Q701N2 237 aaPredicted RBP4.58□□□□□ -1.68
SRRT-210ENST00000477529 KRTAP5-3Q6L8H2 238 aa4.55□□□□□ -1.68
SRRT-210ENST00000477529 LCE3CQ5T5A8 94 aa4.54□□□□□ -1.68
SRRT-210ENST00000477529 GPR98Q8WXG9 6306 aa4.47□□□□□ -1.69
SRRT-210ENST00000477529 PRO0628Q9UI54 55 aa4.44□□□□□ -1.7
SRRT-210ENST00000477529 KRTAP20-2Q3LI61 65 aa4.41□□□□□ -1.7
SRRT-210ENST00000477529 SPRR5A0A1B0GTR4 108 aa4.38□□□□□ -1.71
SRRT-210ENST00000477529 AHNAK2Q8IVF2 5795 aa4.36□□□□□ -1.71
SRRT-210ENST00000477529 KRTAP12-4P60329 112 aa4.36□□□□□ -1.71
SRRT-210ENST00000477529 SYNE1Q8NF91 8797 aaKnown RBP4.35□□□□□ -1.71
SRRT-210ENST00000477529 BRK1Q8WUW1 75 aa4.35□□□□□ -1.71
SRRT-210ENST00000477529 KRTAP5-10Q6L8G5 202 aa4.33□□□□□ -1.72
SRRT-210ENST00000477529 KRTAP9-6A8MVA2 160 aa4.32□□□□□ -1.72
SRRT-210ENST00000477529 MT1AP04731 61 aa4.28□□□□□ -1.72
SRRT-210ENST00000477529 KRTAP6-1Q3LI64 71 aa4.26□□□□□ -1.73
SRRT-210ENST00000477529 PMAIP1Q13794 54 aa4.21□□□□□ -1.74
SRRT-210ENST00000477529 KRTAP5-2Q701N4 177 aa4.15□□□□□ -1.75
SRRT-210ENST00000477529 KRTAP5-7Q6L8G8 165 aa4.13□□□□□ -1.75
SRRT-210ENST00000477529 KRTAP6-2Q3LI66 62 aa4.03□□□□□ -1.76
SRRT-210ENST00000477529 KTN1-AS1Q86SY8 53 aa4.01□□□□□ -1.77
SRRT-210ENST00000477529 H3BS24 57 aa4□□□□□ -1.77
SRRT-210ENST00000477529 PRAC1Q96KF2 57 aa3.94□□□□□ -1.78
SRRT-210ENST00000477529 OBSCNQ5VST9 7968 aa3.87□□□□□ -1.79
SRRT-210ENST00000477529 KRTAP5-8O75690 187 aa3.87□□□□□ -1.79
SRRT-210ENST00000477529 MT3P25713 68 aa3.87□□□□□ -1.79
SRRT-210ENST00000477529 KRTAP5-1Q6L8H4 278 aa3.68□□□□□ -1.82
SRRT-210ENST00000477529 A0A0A0MQY5 61 aa3.65□□□□□ -1.83
SRRT-210ENST00000477529 MUC5ACP98088 5654 aa3.54□□□□□ -1.84
SRRT-210ENST00000477529 LCE1EQ5T753 118 aa3.54□□□□□ -1.84
SRRT-210ENST00000477529 MUC5BQ9HC84 5762 aaPredicted RBP3.53□□□□□ -1.84
SRRT-210ENST00000477529 AHNAKQ09666 5890 aaKnown RBP3.45□□□□□ -1.86
SRRT-210ENST00000477529 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.36□□□□□ -1.87
SRRT-210ENST00000477529 LCE1BQ5T7P3 118 aa3.31□□□□□ -1.88
SRRT-210ENST00000477529 LCE1CQ5T751 118 aa3.29□□□□□ -1.88
SRRT-210ENST00000477529 LCE3DQ9BYE3 92 aa3.28□□□□□ -1.88
SRRT-210ENST00000477529 NDUFAF8A1L188 74 aa3.26□□□□□ -1.89
SRRT-210ENST00000477529 LUZP6Q538Z0 58 aa3.25□□□□□ -1.89
SRRT-210ENST00000477529 KRTAP5-11Q6L8G4 156 aa3.23□□□□□ -1.89
SRRT-210ENST00000477529 LCE3EQ5T5B0 92 aa3.11□□□□□ -1.91
SRRT-210ENST00000477529 LCE1FQ5T754 118 aa2.86□□□□□ -1.95
SRRT-210ENST00000477529 KRTAP21-2Q3LI59 83 aa2.81□□□□□ -1.96
SRRT-210ENST00000477529 KRTAP4-4Q9BYR3 166 aa2.8□□□□□ -1.96
SRRT-210ENST00000477529 INE1O15225 51 aa2.75□□□□□ -1.97
SRRT-210ENST00000477529 PHGR1C9JFL3 82 aa2.58□□□□□ -2
SRRT-210ENST00000477529 PRM1P04553 51 aa2.42□□□□□ -2.02
SRRT-210ENST00000477529 MUC19Q7Z5P9 8384 aa2.37□□□□□ -2.03
SRRT-210ENST00000477529 KRTAP21-1Q3LI58 79 aa1.87□□□□□ -2.11
SRRT-210ENST00000477529 MUC16Q8WXI7 14507 aa1.67□□□□□ -2.14
Retrieved 78 of 20,778 RNA–protein pairs in 66.3 ms