RNA–Protein interactions for RNA: ENST00000477485.1

RTFDC1-206, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 464 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-206ENST00000477485 MT1LQ93083 61 aa2.34□□□□□ -2.03
RTFDC1-206ENST00000477485 SPATA8Q6RVD6 105 aa2.31□□□□□ -2.04
RTFDC1-206ENST00000477485 NDUFAF8A1L188 74 aa2.3□□□□□ -2.04
RTFDC1-206ENST00000477485 SEC61GP60059 68 aa2.3□□□□□ -2.04
RTFDC1-206ENST00000477485 SNURFQ9Y675 71 aa2.3□□□□□ -2.04
RTFDC1-206ENST00000477485 C10orf95Q9H7T3 257 aa2.29□□□□□ -2.04
RTFDC1-206ENST00000477485 SERP1Q9Y6X1 66 aa2.29□□□□□ -2.04
RTFDC1-206ENST00000477485 J3QR89 54 aa2.28□□□□□ -2.04
RTFDC1-206ENST00000477485 LCE3AQ5TA76 89 aa2.28□□□□□ -2.04
RTFDC1-206ENST00000477485 SMIM20Q8N5G0 67 aa2.27□□□□□ -2.05
RTFDC1-206ENST00000477485 KRTAP12-1P59990 96 aa2.26□□□□□ -2.05
RTFDC1-206ENST00000477485 KRTAP20-2Q3LI61 65 aa2.26□□□□□ -2.05
RTFDC1-206ENST00000477485 LCE1FQ5T754 118 aa2.26□□□□□ -2.05
RTFDC1-206ENST00000477485 A0A1B0GU33 70 aa2.25□□□□□ -2.05
RTFDC1-206ENST00000477485 SPANXA2-OT1Q8N9U9 137 aa2.24□□□□□ -2.05
RTFDC1-206ENST00000477485 TNP1P09430 55 aa2.23□□□□□ -2.05
RTFDC1-206ENST00000477485 COA5Q86WW8 74 aa2.23□□□□□ -2.05
RTFDC1-206ENST00000477485 A0A1B0GV90 55 aa2.22□□□□□ -2.05
RTFDC1-206ENST00000477485 KRTAP12-4P60329 112 aa2.22□□□□□ -2.05
RTFDC1-206ENST00000477485 SMIM26A0A096LP01 95 aa2.19□□□□□ -2.06
RTFDC1-206ENST00000477485 A8MU10 97 aa2.18□□□□□ -2.06
RTFDC1-206ENST00000477485 KRTAP12-3P60328 96 aa2.18□□□□□ -2.06
RTFDC1-206ENST00000477485 KRTAP5-5Q701N2 237 aaPredicted RBP2.16□□□□□ -2.06
RTFDC1-206ENST00000477485 A0A1B0GU69 56 aa2.15□□□□□ -2.07
RTFDC1-206ENST00000477485 SERP2Q8N6R1 65 aa2.15□□□□□ -2.07
RTFDC1-206ENST00000477485 LCE3CQ5T5A8 94 aa2.1□□□□□ -2.07
RTFDC1-206ENST00000477485 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.1□□□□□ -2.07
RTFDC1-206ENST00000477485 K7ERU9 68 aa2.09□□□□□ -2.07
RTFDC1-206ENST00000477485 SYNE1Q8NF91 8797 aaKnown RBP2.08□□□□□ -2.08
RTFDC1-206ENST00000477485 KRTAP5-8O75690 187 aa2.04□□□□□ -2.08
RTFDC1-206ENST00000477485 LCE1EQ5T753 118 aa2.03□□□□□ -2.08
RTFDC1-206ENST00000477485 PRR15LQ9BU68 103 aa2.03□□□□□ -2.08
RTFDC1-206ENST00000477485 COX7CP15954 63 aa2.01□□□□□ -2.09
RTFDC1-206ENST00000477485 KRTAP25-1Q3LHN0 102 aa2.01□□□□□ -2.09
RTFDC1-206ENST00000477485 KRTAP5-2Q701N4 177 aa2.01□□□□□ -2.09
RTFDC1-206ENST00000477485 H7BZZ5 65 aa2□□□□□ -2.09
RTFDC1-206ENST00000477485 KRTAP6-1Q3LI64 71 aa2□□□□□ -2.09
RTFDC1-206ENST00000477485 MUC5ACP98088 5654 aa1.99□□□□□ -2.09
RTFDC1-206ENST00000477485 MT1AP04731 61 aa1.99□□□□□ -2.09
RTFDC1-206ENST00000477485 KRTAP5-11Q6L8G4 156 aa1.97□□□□□ -2.09
RTFDC1-206ENST00000477485 KRTAP6-2Q3LI66 62 aa1.96□□□□□ -2.1
RTFDC1-206ENST00000477485 MUC5BQ9HC84 5762 aaPredicted RBP1.96□□□□□ -2.1
RTFDC1-206ENST00000477485 AHNAKQ09666 5890 aaKnown RBP1.95□□□□□ -2.1
RTFDC1-206ENST00000477485 UQCR11O14957 56 aa1.93□□□□□ -2.1
RTFDC1-206ENST00000477485 LCE3EQ5T5B0 92 aa1.92□□□□□ -2.1
RTFDC1-206ENST00000477485 K7ERS5 55 aa1.91□□□□□ -2.1
RTFDC1-206ENST00000477485 LINC01558Q9Y6Z2 57 aa1.9□□□□□ -2.11
RTFDC1-206ENST00000477485 OBSCNQ5VST9 7968 aa1.9□□□□□ -2.11
RTFDC1-206ENST00000477485 KRTAP9-6A8MVA2 160 aa1.88□□□□□ -2.11
RTFDC1-206ENST00000477485 MIR22HGQ0VDD5 57 aa1.88□□□□□ -2.11
RTFDC1-206ENST00000477485 ANAPC13Q9BS18 74 aa1.87□□□□□ -2.11
RTFDC1-206ENST00000477485 ATP5EP56381 51 aaPredicted RBP1.85□□□□□ -2.11
RTFDC1-206ENST00000477485 KRTAP5-1Q6L8H4 278 aa1.84□□□□□ -2.11
RTFDC1-206ENST00000477485 CCDC179H3BU77 68 aa1.82□□□□□ -2.12
RTFDC1-206ENST00000477485 RPS28P62857 69 aaKnown RBP1.82□□□□□ -2.12
RTFDC1-206ENST00000477485 KRTAP4-4Q9BYR3 166 aa1.79□□□□□ -2.12
RTFDC1-206ENST00000477485 CDC42SE1Q9NRR8 79 aa1.77□□□□□ -2.13
RTFDC1-206ENST00000477485 PSPHP1O15172 72 aa1.76□□□□□ -2.13
RTFDC1-206ENST00000477485 TMEM258P61165 79 aa1.73□□□□□ -2.13
RTFDC1-206ENST00000477485 Q1T7F1 81 aa1.72□□□□□ -2.13
RTFDC1-206ENST00000477485 ROMO1P60602 79 aa1.71□□□□□ -2.14
RTFDC1-206ENST00000477485 LCE1BQ5T7P3 118 aa1.7□□□□□ -2.14
RTFDC1-206ENST00000477485 A6NED7 52 aa1.69□□□□□ -2.14
RTFDC1-206ENST00000477485 V9GYY9 64 aa1.68□□□□□ -2.14
RTFDC1-206ENST00000477485 LCE3DQ9BYE3 92 aa1.62□□□□□ -2.15
RTFDC1-206ENST00000477485 LCE1CQ5T751 118 aa1.58□□□□□ -2.16
RTFDC1-206ENST00000477485 LUZP6Q538Z0 58 aa1.5□□□□□ -2.17
RTFDC1-206ENST00000477485 PHGR1C9JFL3 82 aa1.46□□□□□ -2.18
RTFDC1-206ENST00000477485 PRO0628Q9UI54 55 aa1.42□□□□□ -2.18
RTFDC1-206ENST00000477485 KRTAP21-2Q3LI59 83 aa1.3□□□□□ -2.2
RTFDC1-206ENST00000477485 BRK1Q8WUW1 75 aa1.23□□□□□ -2.21
RTFDC1-206ENST00000477485 MUC19Q7Z5P9 8384 aa1.17□□□□□ -2.22
RTFDC1-206ENST00000477485 PMAIP1Q13794 54 aa1.12□□□□□ -2.23
RTFDC1-206ENST00000477485 KRTAP21-1Q3LI58 79 aa1.09□□□□□ -2.23
RTFDC1-206ENST00000477485 KTN1-AS1Q86SY8 53 aa0.94□□□□□ -2.26
RTFDC1-206ENST00000477485 PRM1P04553 51 aa0.88□□□□□ -2.27
RTFDC1-206ENST00000477485 MUC16Q8WXI7 14507 aa0.84□□□□□ -2.27
RTFDC1-206ENST00000477485 INE1O15225 51 aa0.65□□□□□ -2.31
Retrieved 78 of 20,778 RNA–protein pairs in 8.2 ms