RNA–Protein interactions for RNA: ENST00000476858.5

APTX-220, Transcript of aprataxin, humanhuman

TSL 1 (best) BASIC

Gene APTX, Length 1,068 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-220ENST00000476858 KRTAP2-2Q9BYT5 123 aa4.86□□□□□ -1.63
APTX-220ENST00000476858 SPINT4Q6UDR6 99 aa4.85□□□□□ -1.63
APTX-220ENST00000476858 SPRR2EP22531 72 aa4.84□□□□□ -1.63
APTX-220ENST00000476858 SPRR2BP35325 72 aa4.84□□□□□ -1.63
APTX-220ENST00000476858 SPRR2AP35326 72 aa4.84□□□□□ -1.63
APTX-220ENST00000476858 UQCR11O14957 56 aa4.78□□□□□ -1.64
APTX-220ENST00000476858 A6NED7 52 aa4.77□□□□□ -1.65
APTX-220ENST00000476858 KRTAP20-1Q3LI63 56 aa4.77□□□□□ -1.65
APTX-220ENST00000476858 BRK1Q8WUW1 75 aa4.77□□□□□ -1.65
APTX-220ENST00000476858 A0A0A0MQY5 61 aa4.71□□□□□ -1.66
APTX-220ENST00000476858 MIR22HGQ0VDD5 57 aa4.71□□□□□ -1.66
APTX-220ENST00000476858 CDC42SE1Q9NRR8 79 aa4.71□□□□□ -1.66
APTX-220ENST00000476858 KRTAP19-7Q3SYF9 63 aa4.7□□□□□ -1.66
APTX-220ENST00000476858 LCE1EQ5T753 118 aa4.7□□□□□ -1.66
APTX-220ENST00000476858 C10orf95Q9H7T3 257 aa4.69□□□□□ -1.66
APTX-220ENST00000476858 SPRR2DP22532 72 aa4.67□□□□□ -1.66
APTX-220ENST00000476858 KRTAP2-3P0C7H8 128 aa4.66□□□□□ -1.66
APTX-220ENST00000476858 KRTAP2-4Q9BYR9 128 aa4.66□□□□□ -1.66
APTX-220ENST00000476858 MT1EP04732 61 aa4.64□□□□□ -1.67
APTX-220ENST00000476858 KRTAP19-5Q3LI72 72 aa4.62□□□□□ -1.67
APTX-220ENST00000476858 PMAIP1Q13794 54 aa4.58□□□□□ -1.68
APTX-220ENST00000476858 LCE3AQ5TA76 89 aa4.58□□□□□ -1.68
APTX-220ENST00000476858 K7ERS5 55 aa4.54□□□□□ -1.68
APTX-220ENST00000476858 KRTAP19-3Q7Z4W3 81 aa4.53□□□□□ -1.68
APTX-220ENST00000476858 KRTAP2-1Q9BYU5 128 aa4.52□□□□□ -1.69
APTX-220ENST00000476858 TNP1P09430 55 aa4.5□□□□□ -1.69
APTX-220ENST00000476858 KTN1-AS1Q86SY8 53 aa4.49□□□□□ -1.69
APTX-220ENST00000476858 KRTAP5-1Q6L8H4 278 aa4.47□□□□□ -1.69
APTX-220ENST00000476858 MT1LQ93083 61 aa4.46□□□□□ -1.7
APTX-220ENST00000476858 MT1GP13640 62 aa4.4□□□□□ -1.71
APTX-220ENST00000476858 MT1MQ8N339 61 aa4.4□□□□□ -1.71
APTX-220ENST00000476858 KRTAP4-3Q9BYR4 195 aa4.4□□□□□ -1.71
APTX-220ENST00000476858 KRTAP12-3P60328 96 aa4.34□□□□□ -1.71
APTX-220ENST00000476858 DSTQ03001 7570 aaKnown RBP4.32□□□□□ -1.72
APTX-220ENST00000476858 ROMO1P60602 79 aa4.32□□□□□ -1.72
APTX-220ENST00000476858 KRTAP25-1Q3LHN0 102 aa4.31□□□□□ -1.72
APTX-220ENST00000476858 KRTAP4-4Q9BYR3 166 aa4.31□□□□□ -1.72
APTX-220ENST00000476858 KRTAP5-4Q6L8H1 288 aa4.3□□□□□ -1.72
APTX-220ENST00000476858 PP632Q6XCG6 107 aa4.29□□□□□ -1.72
APTX-220ENST00000476858 PRAC1Q96KF2 57 aa4.19□□□□□ -1.74
APTX-220ENST00000476858 MT3P25713 68 aa4.18□□□□□ -1.74
APTX-220ENST00000476858 KRTAP9-6A8MVA2 160 aa4.13□□□□□ -1.75
APTX-220ENST00000476858 MT4P47944 62 aa4.11□□□□□ -1.75
APTX-220ENST00000476858 KRTAP5-5Q701N2 237 aaPredicted RBP4.04□□□□□ -1.76
APTX-220ENST00000476858 LCE3CQ5T5A8 94 aa4.02□□□□□ -1.77
APTX-220ENST00000476858 HMCN1Q96RW7 5635 aa4.02□□□□□ -1.77
APTX-220ENST00000476858 KRTAP20-2Q3LI61 65 aa3.87□□□□□ -1.79
APTX-220ENST00000476858 GPR98Q8WXG9 6306 aa3.86□□□□□ -1.79
APTX-220ENST00000476858 OBSCNQ5VST9 7968 aa3.86□□□□□ -1.79
APTX-220ENST00000476858 LCE1FQ5T754 118 aa3.85□□□□□ -1.79
APTX-220ENST00000476858 SYNE1Q8NF91 8797 aaKnown RBP3.84□□□□□ -1.8
APTX-220ENST00000476858 AHNAK2Q8IVF2 5795 aa3.82□□□□□ -1.8
APTX-220ENST00000476858 KRTAP6-1Q3LI64 71 aa3.8□□□□□ -1.8
APTX-220ENST00000476858 SPRR5A0A1B0GTR4 108 aa3.79□□□□□ -1.8
APTX-220ENST00000476858 KRTAP12-4P60329 112 aa3.78□□□□□ -1.8
APTX-220ENST00000476858 KRTAP5-10Q6L8G5 202 aa3.77□□□□□ -1.81
APTX-220ENST00000476858 MT1AP04731 61 aa3.76□□□□□ -1.81
APTX-220ENST00000476858 KRTAP5-2Q701N4 177 aa3.63□□□□□ -1.83
APTX-220ENST00000476858 NDUFAF8A1L188 74 aa3.58□□□□□ -1.84
APTX-220ENST00000476858 KRTAP6-2Q3LI66 62 aa3.58□□□□□ -1.84
APTX-220ENST00000476858 KRTAP5-7Q6L8G8 165 aa3.56□□□□□ -1.84
APTX-220ENST00000476858 LUZP6Q538Z0 58 aa3.43□□□□□ -1.86
APTX-220ENST00000476858 KRTAP5-8O75690 187 aa3.4□□□□□ -1.87
APTX-220ENST00000476858 LCE3EQ5T5B0 92 aa3.37□□□□□ -1.87
APTX-220ENST00000476858 MUC5ACP98088 5654 aa3.1□□□□□ -1.91
APTX-220ENST00000476858 MUC5BQ9HC84 5762 aaPredicted RBP3.09□□□□□ -1.91
APTX-220ENST00000476858 LCE1CQ5T751 118 aa3.05□□□□□ -1.92
APTX-220ENST00000476858 LCE1BQ5T7P3 118 aa3.05□□□□□ -1.92
APTX-220ENST00000476858 AHNAKQ09666 5890 aaKnown RBP3.04□□□□□ -1.92
APTX-220ENST00000476858 INE1O15225 51 aa2.97□□□□□ -1.93
APTX-220ENST00000476858 LCE3DQ9BYE3 92 aa2.89□□□□□ -1.95
APTX-220ENST00000476858 MUC19Q7Z5P9 8384 aa2.59□□□□□ -1.99
APTX-220ENST00000476858 KRTAP21-2Q3LI59 83 aa2.5□□□□□ -2.01
APTX-220ENST00000476858 PHGR1C9JFL3 82 aa2.25□□□□□ -2.05
APTX-220ENST00000476858 PRM1P04553 51 aa2.22□□□□□ -2.05
APTX-220ENST00000476858 KRTAP21-1Q3LI58 79 aa1.59□□□□□ -2.15
APTX-220ENST00000476858 MUC16Q8WXI7 14507 aa1.44□□□□□ -2.18
Retrieved 77 of 20,778 RNA–protein pairs in 98 ms