RNA–Protein interactions for RNA: ENST00000476016.1

GABRE-207, Transcript of gamma-aminobutyric acid type A receptor epsilon subunit, humanhuman

TSL 4

Gene GABRE, Length 813 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRE-207ENST00000476016 PP632Q6XCG6 107 aa3.25□□□□□ -1.89
GABRE-207ENST00000476016 KRTAP10-7P60409 375 aaPredicted RBP3.22□□□□□ -1.89
GABRE-207ENST00000476016 CRCT1Q9UGL9 99 aa3.21□□□□□ -1.9
GABRE-207ENST00000476016 FCGBPQ9Y6R7 5405 aaPredicted RBP3.21□□□□□ -1.9
GABRE-207ENST00000476016 KRTAP8-1Q8IUC2 63 aa3.15□□□□□ -1.91
GABRE-207ENST00000476016 LCE3AQ5TA76 89 aa3.12□□□□□ -1.91
GABRE-207ENST00000476016 LCE1AQ5T7P2 110 aa3.1□□□□□ -1.91
GABRE-207ENST00000476016 KRTAP19-7Q3SYF9 63 aa3.06□□□□□ -1.92
GABRE-207ENST00000476016 MACF1Q9UPN3 7388 aaKnown RBP3.04□□□□□ -1.92
GABRE-207ENST00000476016 KMT2DO14686 5537 aa3.03□□□□□ -1.92
GABRE-207ENST00000476016 KRTAP12-3P60328 96 aa3.02□□□□□ -1.93
GABRE-207ENST00000476016 KRTAP19-5Q3LI72 72 aa3.02□□□□□ -1.93
GABRE-207ENST00000476016 KRTAP5-9P26371 169 aa3.01□□□□□ -1.93
GABRE-207ENST00000476016 MT1EP04732 61 aa2.98□□□□□ -1.93
GABRE-207ENST00000476016 SYNE2Q8WXH0 6885 aaKnown RBP2.97□□□□□ -1.93
GABRE-207ENST00000476016 KRTAP6-3Q3LI67 103 aa2.94□□□□□ -1.94
GABRE-207ENST00000476016 MT1LQ93083 61 aa2.91□□□□□ -1.94
GABRE-207ENST00000476016 KRTAP2-2Q9BYT5 123 aa2.9□□□□□ -1.95
GABRE-207ENST00000476016 SPRR2FQ96RM1 72 aa2.88□□□□□ -1.95
GABRE-207ENST00000476016 MT1GP13640 62 aa2.87□□□□□ -1.95
GABRE-207ENST00000476016 KRTAP19-3Q7Z4W3 81 aa2.87□□□□□ -1.95
GABRE-207ENST00000476016 SPRR5A0A1B0GTR4 108 aa2.86□□□□□ -1.95
GABRE-207ENST00000476016 LUZP6Q538Z0 58 aa2.85□□□□□ -1.95
GABRE-207ENST00000476016 MUC12Q9UKN1 5478 aa2.84□□□□□ -1.95
GABRE-207ENST00000476016 LCE3CQ5T5A8 94 aa2.84□□□□□ -1.95
GABRE-207ENST00000476016 MT3P25713 68 aa2.83□□□□□ -1.96
GABRE-207ENST00000476016 MT1MQ8N339 61 aa2.8□□□□□ -1.96
GABRE-207ENST00000476016 NDUFAF8A1L188 74 aa2.79□□□□□ -1.96
GABRE-207ENST00000476016 NEBP20929 6669 aa2.75□□□□□ -1.97
GABRE-207ENST00000476016 SPRR2EP22531 72 aa2.74□□□□□ -1.97
GABRE-207ENST00000476016 SPRR2BP35325 72 aa2.74□□□□□ -1.97
GABRE-207ENST00000476016 SPRR2AP35326 72 aa2.74□□□□□ -1.97
GABRE-207ENST00000476016 LCE1EQ5T753 118 aa2.74□□□□□ -1.97
GABRE-207ENST00000476016 MDN1Q9NU22 5596 aa2.74□□□□□ -1.97
GABRE-207ENST00000476016 KRTAP5-11Q6L8G4 156 aa2.73□□□□□ -1.97
GABRE-207ENST00000476016 KRTAP9-6A8MVA2 160 aa2.72□□□□□ -1.97
GABRE-207ENST00000476016 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.72□□□□□ -1.97
GABRE-207ENST00000476016 KRTAP4-3Q9BYR4 195 aa2.71□□□□□ -1.98
GABRE-207ENST00000476016 SPRR2DP22532 72 aa2.64□□□□□ -1.99
GABRE-207ENST00000476016 DSTQ03001 7570 aaKnown RBP2.63□□□□□ -1.99
GABRE-207ENST00000476016 KRTAP5-5Q701N2 237 aaPredicted RBP2.6□□□□□ -1.99
GABRE-207ENST00000476016 KRTAP2-3P0C7H8 128 aa2.56□□□□□ -2
GABRE-207ENST00000476016 KRTAP2-4Q9BYR9 128 aa2.56□□□□□ -2
GABRE-207ENST00000476016 KRTAP5-4Q6L8H1 288 aa2.52□□□□□ -2.01
GABRE-207ENST00000476016 KRTAP2-1Q9BYU5 128 aa2.51□□□□□ -2.01
GABRE-207ENST00000476016 KRTAP20-1Q3LI63 56 aa2.49□□□□□ -2.01
GABRE-207ENST00000476016 MT1AP04731 61 aa2.48□□□□□ -2.01
GABRE-207ENST00000476016 KRTAP6-1Q3LI64 71 aa2.44□□□□□ -2.02
GABRE-207ENST00000476016 LCE1FQ5T754 118 aa2.43□□□□□ -2.02
GABRE-207ENST00000476016 KRTAP5-1Q6L8H4 278 aa2.37□□□□□ -2.03
GABRE-207ENST00000476016 SYNE1Q8NF91 8797 aaKnown RBP2.37□□□□□ -2.03
GABRE-207ENST00000476016 KRTAP12-4P60329 112 aa2.34□□□□□ -2.03
GABRE-207ENST00000476016 KRTAP20-2Q3LI61 65 aa2.29□□□□□ -2.04
GABRE-207ENST00000476016 KRTAP5-2Q701N4 177 aa2.28□□□□□ -2.04
GABRE-207ENST00000476016 INE1O15225 51 aa2.27□□□□□ -2.05
GABRE-207ENST00000476016 MT4P47944 62 aa2.27□□□□□ -2.05
GABRE-207ENST00000476016 GPR98Q8WXG9 6306 aa2.26□□□□□ -2.05
GABRE-207ENST00000476016 KRTAP4-4Q9BYR3 166 aa2.25□□□□□ -2.05
GABRE-207ENST00000476016 KRTAP6-2Q3LI66 62 aa2.24□□□□□ -2.05
GABRE-207ENST00000476016 HMCN1Q96RW7 5635 aa2.23□□□□□ -2.05
GABRE-207ENST00000476016 OBSCNQ5VST9 7968 aa2.14□□□□□ -2.07
GABRE-207ENST00000476016 LCE3DQ9BYE3 92 aa2.13□□□□□ -2.07
GABRE-207ENST00000476016 LCE3EQ5T5B0 92 aa2.08□□□□□ -2.08
GABRE-207ENST00000476016 AHNAK2Q8IVF2 5795 aa2.01□□□□□ -2.09
GABRE-207ENST00000476016 KRTAP5-10Q6L8G5 202 aa1.99□□□□□ -2.09
GABRE-207ENST00000476016 KRTAP5-8O75690 187 aa1.95□□□□□ -2.1
GABRE-207ENST00000476016 KRTAP5-7Q6L8G8 165 aa1.95□□□□□ -2.1
GABRE-207ENST00000476016 LCE1CQ5T751 118 aa1.88□□□□□ -2.11
GABRE-207ENST00000476016 LCE1BQ5T7P3 118 aa1.88□□□□□ -2.11
GABRE-207ENST00000476016 MUC5ACP98088 5654 aa1.8□□□□□ -2.12
GABRE-207ENST00000476016 PRM1P04553 51 aa1.79□□□□□ -2.12
GABRE-207ENST00000476016 AHNAKQ09666 5890 aaKnown RBP1.73□□□□□ -2.13
GABRE-207ENST00000476016 MUC5BQ9HC84 5762 aaPredicted RBP1.65□□□□□ -2.15
GABRE-207ENST00000476016 KRTAP21-2Q3LI59 83 aa1.65□□□□□ -2.15
GABRE-207ENST00000476016 MUC19Q7Z5P9 8384 aa1.48□□□□□ -2.17
GABRE-207ENST00000476016 PHGR1C9JFL3 82 aa1.43□□□□□ -2.18
GABRE-207ENST00000476016 KRTAP21-1Q3LI58 79 aa1.11□□□□□ -2.23
GABRE-207ENST00000476016 MUC16Q8WXI7 14507 aa0.91□□□□□ -2.26
Retrieved 78 of 20,778 RNA–protein pairs in 128.2 ms