RNA–Protein interactions for RNA: ENST00000475367.1

SPTAN1-206, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTAN1, Length 2,237 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-206ENST00000475367 KRTAP4-2Q9BYR5 136 aa3.76□□□□□ -1.81
SPTAN1-206ENST00000475367 SPRR5A0A1B0GTR4 108 aa3.74□□□□□ -1.81
SPTAN1-206ENST00000475367 KRTAP12-3P60328 96 aa3.73□□□□□ -1.81
SPTAN1-206ENST00000475367 KMT2DO14686 5537 aa3.69□□□□□ -1.82
SPTAN1-206ENST00000475367 KRTAP19-5Q3LI72 72 aa3.69□□□□□ -1.82
SPTAN1-206ENST00000475367 KRTAP4-11Q9BYQ6 195 aa3.67□□□□□ -1.82
SPTAN1-206ENST00000475367 FCGBPQ9Y6R7 5405 aaPredicted RBP3.66□□□□□ -1.82
SPTAN1-206ENST00000475367 LCE4AQ5TA78 99 aa3.64□□□□□ -1.83
SPTAN1-206ENST00000475367 KRTAP19-7Q3SYF9 63 aa3.6□□□□□ -1.83
SPTAN1-206ENST00000475367 KRTAP19-4Q3LI73 84 aa3.6□□□□□ -1.83
SPTAN1-206ENST00000475367 LCE5AQ5TCM9 118 aa3.55□□□□□ -1.84
SPTAN1-206ENST00000475367 KRTAP9-7A8MTY7 169 aa3.55□□□□□ -1.84
SPTAN1-206ENST00000475367 MT1EP04732 61 aa3.54□□□□□ -1.84
SPTAN1-206ENST00000475367 CRCT1Q9UGL9 99 aa3.54□□□□□ -1.84
SPTAN1-206ENST00000475367 LCE3CQ5T5A8 94 aa3.5□□□□□ -1.85
SPTAN1-206ENST00000475367 MT1LQ93083 61 aa3.48□□□□□ -1.85
SPTAN1-206ENST00000475367 MACF1Q9UPN3 7388 aaKnown RBP3.46□□□□□ -1.86
SPTAN1-206ENST00000475367 INE1O15225 51 aa3.4□□□□□ -1.87
SPTAN1-206ENST00000475367 SPRR2FQ96RM1 72 aa3.4□□□□□ -1.87
SPTAN1-206ENST00000475367 MUC12Q9UKN1 5478 aa3.39□□□□□ -1.87
SPTAN1-206ENST00000475367 KRTAP19-3Q7Z4W3 81 aa3.37□□□□□ -1.87
SPTAN1-206ENST00000475367 SYNE2Q8WXH0 6885 aaKnown RBP3.36□□□□□ -1.87
SPTAN1-206ENST00000475367 MT1GP13640 62 aa3.34□□□□□ -1.87
SPTAN1-206ENST00000475367 KRTAP9-6A8MVA2 160 aa3.33□□□□□ -1.88
SPTAN1-206ENST00000475367 MT1MQ8N339 61 aa3.32□□□□□ -1.88
SPTAN1-206ENST00000475367 KRTAP5-9P26371 169 aa3.31□□□□□ -1.88
SPTAN1-206ENST00000475367 KRTAP4-3Q9BYR4 195 aa3.31□□□□□ -1.88
SPTAN1-206ENST00000475367 LCE1AQ5T7P2 110 aa3.24□□□□□ -1.89
SPTAN1-206ENST00000475367 MDN1Q9NU22 5596 aa3.23□□□□□ -1.89
SPTAN1-206ENST00000475367 KRTAP6-3Q3LI67 103 aa3.21□□□□□ -1.89
SPTAN1-206ENST00000475367 SPRR2EP22531 72 aa3.2□□□□□ -1.9
SPTAN1-206ENST00000475367 SPRR2BP35325 72 aa3.2□□□□□ -1.9
SPTAN1-206ENST00000475367 SPRR2AP35326 72 aa3.2□□□□□ -1.9
SPTAN1-206ENST00000475367 DSTQ03001 7570 aaKnown RBP3.12□□□□□ -1.91
SPTAN1-206ENST00000475367 KRTAP2-3P0C7H8 128 aa3.09□□□□□ -1.91
SPTAN1-206ENST00000475367 KRTAP2-4Q9BYR9 128 aa3.09□□□□□ -1.91
SPTAN1-206ENST00000475367 KRTAP2-1Q9BYU5 128 aa3.09□□□□□ -1.91
SPTAN1-206ENST00000475367 SPRR2DP22532 72 aa3.08□□□□□ -1.92
SPTAN1-206ENST00000475367 NEBP20929 6669 aa3.04□□□□□ -1.92
SPTAN1-206ENST00000475367 KRTAP5-5Q701N2 237 aaPredicted RBP2.97□□□□□ -1.93
SPTAN1-206ENST00000475367 MT1AP04731 61 aa2.95□□□□□ -1.94
SPTAN1-206ENST00000475367 KRTAP6-1Q3LI64 71 aa2.94□□□□□ -1.94
SPTAN1-206ENST00000475367 KRTAP2-2Q9BYT5 123 aa2.91□□□□□ -1.94
SPTAN1-206ENST00000475367 SYNE1Q8NF91 8797 aaKnown RBP2.83□□□□□ -1.96
SPTAN1-206ENST00000475367 MT3P25713 68 aa2.83□□□□□ -1.96
SPTAN1-206ENST00000475367 KRTAP5-4Q6L8H1 288 aa2.78□□□□□ -1.96
SPTAN1-206ENST00000475367 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.77□□□□□ -1.97
SPTAN1-206ENST00000475367 LCE1FQ5T754 118 aa2.76□□□□□ -1.97
SPTAN1-206ENST00000475367 KRTAP12-4P60329 112 aa2.74□□□□□ -1.97
SPTAN1-206ENST00000475367 KRTAP20-1Q3LI63 56 aa2.72□□□□□ -1.97
SPTAN1-206ENST00000475367 KRTAP6-2Q3LI66 62 aa2.7□□□□□ -1.98
SPTAN1-206ENST00000475367 MT4P47944 62 aa2.69□□□□□ -1.98
SPTAN1-206ENST00000475367 LCE3DQ9BYE3 92 aa2.63□□□□□ -1.99
SPTAN1-206ENST00000475367 HMCN1Q96RW7 5635 aa2.62□□□□□ -1.99
SPTAN1-206ENST00000475367 KRTAP20-2Q3LI61 65 aa2.61□□□□□ -1.99
SPTAN1-206ENST00000475367 LCE3EQ5T5B0 92 aa2.57□□□□□ -2
SPTAN1-206ENST00000475367 KRTAP5-2Q701N4 177 aa2.54□□□□□ -2
SPTAN1-206ENST00000475367 KRTAP5-11Q6L8G4 156 aa2.46□□□□□ -2.02
SPTAN1-206ENST00000475367 LCE1EQ5T753 118 aa2.44□□□□□ -2.02
SPTAN1-206ENST00000475367 OBSCNQ5VST9 7968 aa2.42□□□□□ -2.02
SPTAN1-206ENST00000475367 PRM1P04553 51 aa2.38□□□□□ -2.03
SPTAN1-206ENST00000475367 GPR98Q8WXG9 6306 aa2.37□□□□□ -2.03
SPTAN1-206ENST00000475367 AHNAK2Q8IVF2 5795 aa2.31□□□□□ -2.04
SPTAN1-206ENST00000475367 KRTAP4-4Q9BYR3 166 aa2.23□□□□□ -2.05
SPTAN1-206ENST00000475367 KRTAP5-1Q6L8H4 278 aa2.23□□□□□ -2.05
SPTAN1-206ENST00000475367 MUC5BQ9HC84 5762 aaPredicted RBP2.2□□□□□ -2.06
SPTAN1-206ENST00000475367 MUC5ACP98088 5654 aa2.19□□□□□ -2.06
SPTAN1-206ENST00000475367 LCE1BQ5T7P3 118 aa2.18□□□□□ -2.06
SPTAN1-206ENST00000475367 KRTAP5-8O75690 187 aa2.15□□□□□ -2.06
SPTAN1-206ENST00000475367 KRTAP5-10Q6L8G5 202 aa2.14□□□□□ -2.07
SPTAN1-206ENST00000475367 LCE1CQ5T751 118 aa2.12□□□□□ -2.07
SPTAN1-206ENST00000475367 KRTAP5-7Q6L8G8 165 aa2.09□□□□□ -2.08
SPTAN1-206ENST00000475367 KRTAP21-2Q3LI59 83 aa1.91□□□□□ -2.1
SPTAN1-206ENST00000475367 AHNAKQ09666 5890 aaKnown RBP1.84□□□□□ -2.11
SPTAN1-206ENST00000475367 PHGR1C9JFL3 82 aa1.6□□□□□ -2.15
SPTAN1-206ENST00000475367 KRTAP21-1Q3LI58 79 aa1.55□□□□□ -2.16
SPTAN1-206ENST00000475367 MUC19Q7Z5P9 8384 aa1.44□□□□□ -2.18
SPTAN1-206ENST00000475367 MUC16Q8WXI7 14507 aa1.06□□□□□ -2.24
Retrieved 78 of 20,778 RNA–protein pairs in 15 ms