RNA–Protein interactions for RNA: ENST00000474996.6

COL2A1-205, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 3

Gene COL2A1, Length 760 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-205ENST00000474996 SPINT4Q6UDR6 99 aa5.31□□□□□ -1.56
COL2A1-205ENST00000474996 K7ERS5 55 aa5.27□□□□□ -1.57
COL2A1-205ENST00000474996 BRK1Q8WUW1 75 aa5.27□□□□□ -1.57
COL2A1-205ENST00000474996 LCE1DQ5T752 114 aa5.26□□□□□ -1.57
COL2A1-205ENST00000474996 MT1GP13640 62 aa5.21□□□□□ -1.58
COL2A1-205ENST00000474996 KRTAP19-5Q3LI72 72 aa5.21□□□□□ -1.58
COL2A1-205ENST00000474996 MT4P47944 62 aa5.18□□□□□ -1.58
COL2A1-205ENST00000474996 LCE4AQ5TA78 99 aa5.17□□□□□ -1.58
COL2A1-205ENST00000474996 PP632Q6XCG6 107 aa5.17□□□□□ -1.58
COL2A1-205ENST00000474996 HMCN1Q96RW7 5635 aa5.16□□□□□ -1.58
COL2A1-205ENST00000474996 MT1MQ8N339 61 aa5.13□□□□□ -1.59
COL2A1-205ENST00000474996 PRO0628Q9UI54 55 aa5.13□□□□□ -1.59
COL2A1-205ENST00000474996 C10orf95Q9H7T3 257 aa5.12□□□□□ -1.59
COL2A1-205ENST00000474996 MT1LQ93083 61 aa5.09□□□□□ -1.59
COL2A1-205ENST00000474996 AHNAK2Q8IVF2 5795 aa5.07□□□□□ -1.6
COL2A1-205ENST00000474996 KRTAP5-10Q6L8G5 202 aa5.06□□□□□ -1.6
COL2A1-205ENST00000474996 KRTAP4-3Q9BYR4 195 aa5.05□□□□□ -1.6
COL2A1-205ENST00000474996 ROMO1P60602 79 aa5.04□□□□□ -1.6
COL2A1-205ENST00000474996 KRTAP5-4Q6L8H1 288 aa5.03□□□□□ -1.6
COL2A1-205ENST00000474996 KRTAP25-1Q3LHN0 102 aa5□□□□□ -1.61
COL2A1-205ENST00000474996 KRTAP4-6Q9BYQ5 205 aa5□□□□□ -1.61
COL2A1-205ENST00000474996 TNP1P09430 55 aa4.99□□□□□ -1.61
COL2A1-205ENST00000474996 PMAIP1Q13794 54 aa4.99□□□□□ -1.61
COL2A1-205ENST00000474996 LCE3AQ5TA76 89 aa4.97□□□□□ -1.61
COL2A1-205ENST00000474996 KRTAP5-7Q6L8G8 165 aa4.95□□□□□ -1.62
COL2A1-205ENST00000474996 SPRR5A0A1B0GTR4 108 aa4.89□□□□□ -1.63
COL2A1-205ENST00000474996 KRTAP23-1A1A580 65 aa4.89□□□□□ -1.63
COL2A1-205ENST00000474996 KRTAP4-7Q9BYR0 210 aa4.85□□□□□ -1.63
COL2A1-205ENST00000474996 KRTAP5-3Q6L8H2 238 aa4.84□□□□□ -1.63
COL2A1-205ENST00000474996 KRTAP20-2Q3LI61 65 aa4.77□□□□□ -1.65
COL2A1-205ENST00000474996 KTN1-AS1Q86SY8 53 aa4.77□□□□□ -1.65
COL2A1-205ENST00000474996 KRTAP12-3P60328 96 aa4.76□□□□□ -1.65
COL2A1-205ENST00000474996 KRTAP5-5Q701N2 237 aaPredicted RBP4.72□□□□□ -1.65
COL2A1-205ENST00000474996 PRAC1Q96KF2 57 aa4.66□□□□□ -1.66
COL2A1-205ENST00000474996 KRTAP12-4P60329 112 aa4.65□□□□□ -1.67
COL2A1-205ENST00000474996 LOC100996750A0A140TA64 210 aa4.61□□□□□ -1.67
COL2A1-205ENST00000474996 SYNE1Q8NF91 8797 aaKnown RBP4.6□□□□□ -1.67
COL2A1-205ENST00000474996 KRTAP15-1Q3LI76 137 aa4.51□□□□□ -1.69
COL2A1-205ENST00000474996 KRTAP19-4Q3LI73 84 aa4.5□□□□□ -1.69
COL2A1-205ENST00000474996 KRTAP4-11Q9BYQ6 195 aa4.42□□□□□ -1.7
COL2A1-205ENST00000474996 SVIPQ8NHG7 77 aa4.41□□□□□ -1.7
COL2A1-205ENST00000474996 AHNAKQ09666 5890 aaKnown RBP4.41□□□□□ -1.7
COL2A1-205ENST00000474996 KRTAP5-2Q701N4 177 aa4.37□□□□□ -1.71
COL2A1-205ENST00000474996 LCE3CQ5T5A8 94 aa4.36□□□□□ -1.71
COL2A1-205ENST00000474996 MUC5ACP98088 5654 aa4.32□□□□□ -1.72
COL2A1-205ENST00000474996 MT1AP04731 61 aa4.32□□□□□ -1.72
COL2A1-205ENST00000474996 KRTAP6-1Q3LI64 71 aa4.32□□□□□ -1.72
COL2A1-205ENST00000474996 KRTAP5-8O75690 187 aa4.28□□□□□ -1.72
COL2A1-205ENST00000474996 MUC5BQ9HC84 5762 aaPredicted RBP4.24□□□□□ -1.73
COL2A1-205ENST00000474996 KRTAP9-4Q9BYQ2 154 aa4.2□□□□□ -1.74
COL2A1-205ENST00000474996 OBSCNQ5VST9 7968 aa4.19□□□□□ -1.74
COL2A1-205ENST00000474996 KRTAP6-2Q3LI66 62 aa4.18□□□□□ -1.74
COL2A1-205ENST00000474996 KRTAP9-6A8MVA2 160 aa4.14□□□□□ -1.75
COL2A1-205ENST00000474996 KRTAP9-9Q9BYP9 154 aa4.1□□□□□ -1.75
COL2A1-205ENST00000474996 MT3P25713 68 aa3.96□□□□□ -1.78
COL2A1-205ENST00000474996 KRTAP5-1Q6L8H4 278 aa3.96□□□□□ -1.78
COL2A1-205ENST00000474996 LUZP6Q538Z0 58 aa3.86□□□□□ -1.79
COL2A1-205ENST00000474996 LCE1EQ5T753 118 aa3.69□□□□□ -1.82
COL2A1-205ENST00000474996 NDUFAF8A1L188 74 aa3.61□□□□□ -1.83
COL2A1-205ENST00000474996 LCE1BQ5T7P3 118 aa3.52□□□□□ -1.85
COL2A1-205ENST00000474996 KRTAP4-2Q9BYR5 136 aa3.52□□□□□ -1.85
COL2A1-205ENST00000474996 LCE1CQ5T751 118 aa3.43□□□□□ -1.86
COL2A1-205ENST00000474996 KRTAP4-12Q9BQ66 201 aa3.31□□□□□ -1.88
COL2A1-205ENST00000474996 LCE3DQ9BYE3 92 aa3.21□□□□□ -1.9
COL2A1-205ENST00000474996 A0A0A0MQY5 61 aa3.14□□□□□ -1.91
COL2A1-205ENST00000474996 KRTAP5-11Q6L8G4 156 aa3.13□□□□□ -1.91
COL2A1-205ENST00000474996 LCE3EQ5T5B0 92 aa3.1□□□□□ -1.91
COL2A1-205ENST00000474996 LCE1FQ5T754 118 aa3.09□□□□□ -1.91
COL2A1-205ENST00000474996 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.08□□□□□ -1.92
COL2A1-205ENST00000474996 INE1O15225 51 aa3.05□□□□□ -1.92
COL2A1-205ENST00000474996 PHGR1C9JFL3 82 aa3.01□□□□□ -1.93
COL2A1-205ENST00000474996 KRTAP21-2Q3LI59 83 aa2.85□□□□□ -1.95
COL2A1-205ENST00000474996 H3BS24 57 aa2.79□□□□□ -1.96
COL2A1-205ENST00000474996 KRTAP4-4Q9BYR3 166 aa2.67□□□□□ -1.98
COL2A1-205ENST00000474996 PRM1P04553 51 aa2.59□□□□□ -1.99
COL2A1-205ENST00000474996 MUC19Q7Z5P9 8384 aa2.57□□□□□ -2
COL2A1-205ENST00000474996 KRTAP21-1Q3LI58 79 aa2.29□□□□□ -2.04
COL2A1-205ENST00000474996 MUC16Q8WXI7 14507 aa1.83□□□□□ -2.12
Retrieved 78 of 20,778 RNA–protein pairs in 115.3 ms