RNA–Protein interactions for RNA: ENST00000474835.5

USP16-205, Transcript of ubiquitin specific peptidase 16, humanhuman

TSL 1 (best)

Gene USP16, Length 3,835 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-205ENST00000474835 USH2AO75445 5202 aa1.66□□□□□ -2.14
USP16-205ENST00000474835 KRTAP19-8Q3LI54 63 aa1.66□□□□□ -2.14
USP16-205ENST00000474835 KRTAP5-9P26371 169 aa1.62□□□□□ -2.15
USP16-205ENST00000474835 KRTAP10-7P60409 375 aaPredicted RBP1.61□□□□□ -2.15
USP16-205ENST00000474835 MT1XP80297 61 aa1.59□□□□□ -2.15
USP16-205ENST00000474835 KRTAP9-6A8MVA2 160 aa1.59□□□□□ -2.15
USP16-205ENST00000474835 KRTAP19-5Q3LI72 72 aa1.59□□□□□ -2.15
USP16-205ENST00000474835 LCE3AQ5TA76 89 aa1.59□□□□□ -2.15
USP16-205ENST00000474835 MT1BP07438 61 aa1.57□□□□□ -2.16
USP16-205ENST00000474835 TNP1P09430 55 aa1.56□□□□□ -2.16
USP16-205ENST00000474835 R4GN34 69 aa1.56□□□□□ -2.16
USP16-205ENST00000474835 LCE3CQ5T5A8 94 aa1.49□□□□□ -2.17
USP16-205ENST00000474835 KRTAP5-4Q6L8H1 288 aa1.49□□□□□ -2.17
USP16-205ENST00000474835 MT1FP04733 61 aa1.49□□□□□ -2.17
USP16-205ENST00000474835 SSPOA2VEC9 5147 aa1.48□□□□□ -2.17
USP16-205ENST00000474835 DSTQ03001 7570 aaKnown RBP1.48□□□□□ -2.17
USP16-205ENST00000474835 MT2AP02795 61 aa1.48□□□□□ -2.17
USP16-205ENST00000474835 KRTAP12-3P60328 96 aa1.46□□□□□ -2.18
USP16-205ENST00000474835 MT1HP80294 61 aa1.46□□□□□ -2.18
USP16-205ENST00000474835 KRTAP19-7Q3SYF9 63 aa1.46□□□□□ -2.18
USP16-205ENST00000474835 FSIP2Q5CZC0 6907 aa1.45□□□□□ -2.18
USP16-205ENST00000474835 KRTAP5-11Q6L8G4 156 aa1.44□□□□□ -2.18
USP16-205ENST00000474835 OBSCNQ5VST9 7968 aa1.44□□□□□ -2.18
USP16-205ENST00000474835 LCE1AQ5T7P2 110 aa1.43□□□□□ -2.18
USP16-205ENST00000474835 MT1EP04732 61 aa1.42□□□□□ -2.18
USP16-205ENST00000474835 GPR98Q8WXG9 6306 aa1.42□□□□□ -2.18
USP16-205ENST00000474835 FCGBPQ9Y6R7 5405 aaPredicted RBP1.41□□□□□ -2.18
USP16-205ENST00000474835 MT3P25713 68 aa1.41□□□□□ -2.18
USP16-205ENST00000474835 KRTAP5-2Q701N4 177 aa1.41□□□□□ -2.18
USP16-205ENST00000474835 MUC12Q9UKN1 5478 aa1.39□□□□□ -2.19
USP16-205ENST00000474835 KRTAP2-2Q9BYT5 123 aa1.39□□□□□ -2.19
USP16-205ENST00000474835 KRTAP5-5Q701N2 237 aaPredicted RBP1.38□□□□□ -2.19
USP16-205ENST00000474835 SYNE1Q8NF91 8797 aaKnown RBP1.37□□□□□ -2.19
USP16-205ENST00000474835 MT1LQ93083 61 aa1.37□□□□□ -2.19
USP16-205ENST00000474835 LCE1EQ5T753 118 aa1.36□□□□□ -2.19
USP16-205ENST00000474835 MT1AP04731 61 aa1.36□□□□□ -2.19
USP16-205ENST00000474835 CRCT1Q9UGL9 99 aa1.35□□□□□ -2.19
USP16-205ENST00000474835 KRTAP6-3Q3LI67 103 aa1.34□□□□□ -2.2
USP16-205ENST00000474835 SYNE2Q8WXH0 6885 aaKnown RBP1.28□□□□□ -2.2
USP16-205ENST00000474835 KRTAP4-3Q9BYR4 195 aa1.27□□□□□ -2.21
USP16-205ENST00000474835 KRTAP5-1Q6L8H4 278 aa1.26□□□□□ -2.21
USP16-205ENST00000474835 KRTAP4-4Q9BYR3 166 aa1.24□□□□□ -2.21
USP16-205ENST00000474835 MDN1Q9NU22 5596 aa1.24□□□□□ -2.21
USP16-205ENST00000474835 NEBP20929 6669 aa1.23□□□□□ -2.21
USP16-205ENST00000474835 KRTAP5-8O75690 187 aa1.22□□□□□ -2.21
USP16-205ENST00000474835 LCE1FQ5T754 118 aa1.22□□□□□ -2.21
USP16-205ENST00000474835 KRTAP5-7Q6L8G8 165 aa1.22□□□□□ -2.21
USP16-205ENST00000474835 MT1MQ8N339 61 aa1.21□□□□□ -2.22
USP16-205ENST00000474835 AHNAKQ09666 5890 aaKnown RBP1.21□□□□□ -2.22
USP16-205ENST00000474835 KRTAP12-4P60329 112 aa1.2□□□□□ -2.22
USP16-205ENST00000474835 KRTAP19-6Q3LI70 58 aa1.19□□□□□ -2.22
USP16-205ENST00000474835 M0R2T5 61 aa1.18□□□□□ -2.22
USP16-205ENST00000474835 MT1GP13640 62 aa1.16□□□□□ -2.22
USP16-205ENST00000474835 KRTAP19-3Q7Z4W3 81 aa1.15□□□□□ -2.22
USP16-205ENST00000474835 MACF1Q9UPN3 7388 aaKnown RBP1.14□□□□□ -2.23
USP16-205ENST00000474835 SPRR2FQ96RM1 72 aa1.14□□□□□ -2.23
USP16-205ENST00000474835 KRTAP20-1Q3LI63 56 aa1.13□□□□□ -2.23
USP16-205ENST00000474835 KRTAP6-1Q3LI64 71 aa1.13□□□□□ -2.23
USP16-205ENST00000474835 PRM1P04553 51 aa1.1□□□□□ -2.23
USP16-205ENST00000474835 KRTAP5-10Q6L8G5 202 aa1.1□□□□□ -2.23
USP16-205ENST00000474835 KRTAP6-2Q3LI66 62 aa1.09□□□□□ -2.24
USP16-205ENST00000474835 LCE3EQ5T5B0 92 aa1.08□□□□□ -2.24
USP16-205ENST00000474835 AHNAK2Q8IVF2 5795 aa1.06□□□□□ -2.24
USP16-205ENST00000474835 LCE3DQ9BYE3 92 aa1.05□□□□□ -2.24
USP16-205ENST00000474835 SPRR2AP35326 72 aa1.05□□□□□ -2.24
USP16-205ENST00000474835 MUC19Q7Z5P9 8384 aa1.02□□□□□ -2.25
USP16-205ENST00000474835 SPRR2EP22531 72 aa1.01□□□□□ -2.25
USP16-205ENST00000474835 SPRR2BP35325 72 aa0.99□□□□□ -2.25
USP16-205ENST00000474835 KRTAP21-1Q3LI58 79 aa0.96□□□□□ -2.26
USP16-205ENST00000474835 MUC5ACP98088 5654 aa0.94□□□□□ -2.26
USP16-205ENST00000474835 SPRR2DP22532 72 aa0.93□□□□□ -2.26
USP16-205ENST00000474835 LCE1CQ5T751 118 aa0.88□□□□□ -2.27
USP16-205ENST00000474835 LCE1BQ5T7P3 118 aa0.88□□□□□ -2.27
USP16-205ENST00000474835 KRTAP21-2Q3LI59 83 aa0.85□□□□□ -2.27
USP16-205ENST00000474835 KRTAP20-2Q3LI61 65 aa0.79□□□□□ -2.28
USP16-205ENST00000474835 MT4P47944 62 aa0.7□□□□□ -2.3
USP16-205ENST00000474835 MUC16Q8WXI7 14507 aa0.61□□□□□ -2.31
USP16-205ENST00000474835 PHGR1C9JFL3 82 aa0.61□□□□□ -2.31
Retrieved 78 of 20,778 RNA–protein pairs in 65.1 ms