RNA–Protein interactions for RNA: ENST00000473924.1

DDX56-209, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-209ENST00000473924 KRTAP2-1Q9BYU5 128 aa4.57□□□□□ -1.68
DDX56-209ENST00000473924 KRTAP19-3Q7Z4W3 81 aa4.52□□□□□ -1.69
DDX56-209ENST00000473924 LCE5AQ5TCM9 118 aa4.48□□□□□ -1.69
DDX56-209ENST00000473924 ROMO1P60602 79 aa4.47□□□□□ -1.69
DDX56-209ENST00000473924 KRTAP12-3P60328 96 aa4.45□□□□□ -1.7
DDX56-209ENST00000473924 LCE3BQ5TA77 95 aa4.44□□□□□ -1.7
DDX56-209ENST00000473924 MT1GP13640 62 aa4.43□□□□□ -1.7
DDX56-209ENST00000473924 PP632Q6XCG6 107 aa4.43□□□□□ -1.7
DDX56-209ENST00000473924 MT1LQ93083 61 aa4.43□□□□□ -1.7
DDX56-209ENST00000473924 KRTAP23-1A1A580 65 aa4.4□□□□□ -1.71
DDX56-209ENST00000473924 BRK1Q8WUW1 75 aa4.37□□□□□ -1.71
DDX56-209ENST00000473924 MT1MQ8N339 61 aa4.36□□□□□ -1.71
DDX56-209ENST00000473924 KRTAP4-3Q9BYR4 195 aa4.25□□□□□ -1.73
DDX56-209ENST00000473924 KRTAP15-1Q3LI76 137 aa4.23□□□□□ -1.73
DDX56-209ENST00000473924 KRTAP4-7Q9BYR0 210 aa4.23□□□□□ -1.73
DDX56-209ENST00000473924 GPR98Q8WXG9 6306 aa4.22□□□□□ -1.73
DDX56-209ENST00000473924 DSTQ03001 7570 aaKnown RBP4.2□□□□□ -1.74
DDX56-209ENST00000473924 KRTAP19-4Q3LI73 84 aa4.2□□□□□ -1.74
DDX56-209ENST00000473924 KRTAP4-9Q9BYQ8 210 aa4.13□□□□□ -1.75
DDX56-209ENST00000473924 PMAIP1Q13794 54 aa4.12□□□□□ -1.75
DDX56-209ENST00000473924 LCE3CQ5T5A8 94 aa4.12□□□□□ -1.75
DDX56-209ENST00000473924 LCE4AQ5TA78 99 aa4.06□□□□□ -1.76
DDX56-209ENST00000473924 MT4P47944 62 aa4□□□□□ -1.77
DDX56-209ENST00000473924 LCE1DQ5T752 114 aa4□□□□□ -1.77
DDX56-209ENST00000473924 LOC100996750A0A140TA64 210 aa3.99□□□□□ -1.77
DDX56-209ENST00000473924 KRTAP5-4Q6L8H1 288 aa3.99□□□□□ -1.77
DDX56-209ENST00000473924 PRO0628Q9UI54 55 aa3.99□□□□□ -1.77
DDX56-209ENST00000473924 KRTAP5-5Q701N2 237 aaPredicted RBP3.95□□□□□ -1.78
DDX56-209ENST00000473924 PRAC1Q96KF2 57 aa3.89□□□□□ -1.79
DDX56-209ENST00000473924 HMCN1Q96RW7 5635 aa3.89□□□□□ -1.79
DDX56-209ENST00000473924 KRTAP4-6Q9BYQ5 205 aa3.88□□□□□ -1.79
DDX56-209ENST00000473924 KRTAP5-10Q6L8G5 202 aa3.85□□□□□ -1.79
DDX56-209ENST00000473924 KRTAP9-6A8MVA2 160 aa3.84□□□□□ -1.79
DDX56-209ENST00000473924 KRTAP12-4P60329 112 aa3.84□□□□□ -1.79
DDX56-209ENST00000473924 AHNAK2Q8IVF2 5795 aa3.82□□□□□ -1.8
DDX56-209ENST00000473924 SPRR5A0A1B0GTR4 108 aa3.78□□□□□ -1.8
DDX56-209ENST00000473924 MT1AP04731 61 aa3.77□□□□□ -1.81
DDX56-209ENST00000473924 KRTAP20-2Q3LI61 65 aa3.77□□□□□ -1.81
DDX56-209ENST00000473924 KTN1-AS1Q86SY8 53 aa3.77□□□□□ -1.81
DDX56-209ENST00000473924 KRTAP5-7Q6L8G8 165 aa3.75□□□□□ -1.81
DDX56-209ENST00000473924 KRTAP6-1Q3LI64 71 aa3.74□□□□□ -1.81
DDX56-209ENST00000473924 KRTAP5-3Q6L8H2 238 aa3.71□□□□□ -1.82
DDX56-209ENST00000473924 SVIPQ8NHG7 77 aa3.63□□□□□ -1.83
DDX56-209ENST00000473924 KRTAP9-4Q9BYQ2 154 aa3.62□□□□□ -1.83
DDX56-209ENST00000473924 SYNE1Q8NF91 8797 aaKnown RBP3.62□□□□□ -1.83
DDX56-209ENST00000473924 KRTAP5-2Q701N4 177 aa3.54□□□□□ -1.84
DDX56-209ENST00000473924 KRTAP6-2Q3LI66 62 aa3.53□□□□□ -1.84
DDX56-209ENST00000473924 MT3P25713 68 aa3.46□□□□□ -1.86
DDX56-209ENST00000473924 KRTAP4-11Q9BYQ6 195 aa3.39□□□□□ -1.87
DDX56-209ENST00000473924 LUZP6Q538Z0 58 aa3.3□□□□□ -1.88
DDX56-209ENST00000473924 KRTAP5-8O75690 187 aa3.26□□□□□ -1.89
DDX56-209ENST00000473924 MUC5ACP98088 5654 aa3.23□□□□□ -1.89
DDX56-209ENST00000473924 AHNAKQ09666 5890 aaKnown RBP3.22□□□□□ -1.89
DDX56-209ENST00000473924 MUC5BQ9HC84 5762 aaPredicted RBP3.18□□□□□ -1.9
DDX56-209ENST00000473924 OBSCNQ5VST9 7968 aa3.17□□□□□ -1.9
DDX56-209ENST00000473924 KRTAP9-9Q9BYP9 154 aa3.17□□□□□ -1.9
DDX56-209ENST00000473924 KRTAP5-1Q6L8H4 278 aa3.13□□□□□ -1.91
DDX56-209ENST00000473924 LCE1EQ5T753 118 aa3.1□□□□□ -1.91
DDX56-209ENST00000473924 LCE3DQ9BYE3 92 aa3.02□□□□□ -1.93
DDX56-209ENST00000473924 LCE1BQ5T7P3 118 aa2.94□□□□□ -1.94
DDX56-209ENST00000473924 KRTAP4-2Q9BYR5 136 aa2.89□□□□□ -1.95
DDX56-209ENST00000473924 LCE3EQ5T5B0 92 aa2.88□□□□□ -1.95
DDX56-209ENST00000473924 LCE1CQ5T751 118 aa2.88□□□□□ -1.95
DDX56-209ENST00000473924 NDUFAF8A1L188 74 aa2.85□□□□□ -1.95
DDX56-209ENST00000473924 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.63□□□□□ -1.99
DDX56-209ENST00000473924 KRTAP5-11Q6L8G4 156 aa2.58□□□□□ -2
DDX56-209ENST00000473924 KRTAP4-12Q9BQ66 201 aa2.57□□□□□ -2
DDX56-209ENST00000473924 LCE1FQ5T754 118 aa2.46□□□□□ -2.02
DDX56-209ENST00000473924 KRTAP21-2Q3LI59 83 aa2.44□□□□□ -2.02
DDX56-209ENST00000473924 A0A0A0MQY5 61 aa2.39□□□□□ -2.03
DDX56-209ENST00000473924 INE1O15225 51 aa2.32□□□□□ -2.04
DDX56-209ENST00000473924 PHGR1C9JFL3 82 aa2.3□□□□□ -2.04
DDX56-209ENST00000473924 PRM1P04553 51 aa2.29□□□□□ -2.04
DDX56-209ENST00000473924 KRTAP4-4Q9BYR3 166 aa2.23□□□□□ -2.05
DDX56-209ENST00000473924 MUC19Q7Z5P9 8384 aa1.91□□□□□ -2.1
DDX56-209ENST00000473924 KRTAP21-1Q3LI58 79 aa1.75□□□□□ -2.13
DDX56-209ENST00000473924 H3BS24 57 aa1.63□□□□□ -2.15
DDX56-209ENST00000473924 MUC16Q8WXI7 14507 aa1.39□□□□□ -2.19
Retrieved 78 of 20,778 RNA–protein pairs in 76.3 ms