RNA–Protein interactions for RNA: ENST00000473420.5

CTDSP1-207, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 922 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-207ENST00000473420 KRTAP20-1Q3LI63 56 aa6.89□□□□□ -1.31
CTDSP1-207ENST00000473420 KRTAP19-3Q7Z4W3 81 aa6.89□□□□□ -1.31
CTDSP1-207ENST00000473420 LCE5AQ5TCM9 118 aa6.85□□□□□ -1.31
CTDSP1-207ENST00000473420 BRK1Q8WUW1 75 aa6.85□□□□□ -1.31
CTDSP1-207ENST00000473420 KRTAP2-3P0C7H8 128 aa6.84□□□□□ -1.31
CTDSP1-207ENST00000473420 KRTAP2-4Q9BYR9 128 aa6.84□□□□□ -1.31
CTDSP1-207ENST00000473420 KRTAP12-3P60328 96 aa6.82□□□□□ -1.32
CTDSP1-207ENST00000473420 MT1GP13640 62 aa6.79□□□□□ -1.32
CTDSP1-207ENST00000473420 MT1LQ93083 61 aa6.79□□□□□ -1.32
CTDSP1-207ENST00000473420 PP632Q6XCG6 107 aa6.74□□□□□ -1.33
CTDSP1-207ENST00000473420 LCE3BQ5TA77 95 aa6.68□□□□□ -1.34
CTDSP1-207ENST00000473420 MT1MQ8N339 61 aa6.66□□□□□ -1.34
CTDSP1-207ENST00000473420 KRTAP2-2Q9BYT5 123 aa6.65□□□□□ -1.34
CTDSP1-207ENST00000473420 KRTAP2-1Q9BYU5 128 aa6.65□□□□□ -1.34
CTDSP1-207ENST00000473420 KRTAP19-4Q3LI73 84 aa6.55□□□□□ -1.36
CTDSP1-207ENST00000473420 KRTAP15-1Q3LI76 137 aa6.52□□□□□ -1.37
CTDSP1-207ENST00000473420 PMAIP1Q13794 54 aa6.47□□□□□ -1.37
CTDSP1-207ENST00000473420 DSTQ03001 7570 aaKnown RBP6.47□□□□□ -1.37
CTDSP1-207ENST00000473420 KRTAP4-3Q9BYR4 195 aa6.44□□□□□ -1.38
CTDSP1-207ENST00000473420 KRTAP4-7Q9BYR0 210 aa6.43□□□□□ -1.38
CTDSP1-207ENST00000473420 PRO0628Q9UI54 55 aa6.38□□□□□ -1.39
CTDSP1-207ENST00000473420 LCE3CQ5T5A8 94 aa6.33□□□□□ -1.4
CTDSP1-207ENST00000473420 LCE4AQ5TA78 99 aa6.16□□□□□ -1.42
CTDSP1-207ENST00000473420 KRTAP5-4Q6L8H1 288 aa6.12□□□□□ -1.43
CTDSP1-207ENST00000473420 PRAC1Q96KF2 57 aa6.09□□□□□ -1.43
CTDSP1-207ENST00000473420 KRTAP5-5Q701N2 237 aaPredicted RBP6.08□□□□□ -1.44
CTDSP1-207ENST00000473420 KRTAP4-9Q9BYQ8 210 aa6.06□□□□□ -1.44
CTDSP1-207ENST00000473420 KRTAP4-12Q9BQ66 201 aa6.03□□□□□ -1.44
CTDSP1-207ENST00000473420 LCE1DQ5T752 114 aa6.01□□□□□ -1.45
CTDSP1-207ENST00000473420 KTN1-AS1Q86SY8 53 aa6□□□□□ -1.45
CTDSP1-207ENST00000473420 MT4P47944 62 aa5.97□□□□□ -1.45
CTDSP1-207ENST00000473420 KRTAP9-6A8MVA2 160 aa5.94□□□□□ -1.46
CTDSP1-207ENST00000473420 KRTAP9-9Q9BYP9 154 aa5.91□□□□□ -1.46
CTDSP1-207ENST00000473420 KRTAP9-4Q9BYQ2 154 aa5.91□□□□□ -1.46
CTDSP1-207ENST00000473420 HMCN1Q96RW7 5635 aa5.86□□□□□ -1.47
CTDSP1-207ENST00000473420 SVIPQ8NHG7 77 aa5.82□□□□□ -1.48
CTDSP1-207ENST00000473420 KRTAP12-4P60329 112 aa5.81□□□□□ -1.48
CTDSP1-207ENST00000473420 MT1AP04731 61 aa5.8□□□□□ -1.48
CTDSP1-207ENST00000473420 SPRR5A0A1B0GTR4 108 aa5.78□□□□□ -1.48
CTDSP1-207ENST00000473420 KRTAP20-2Q3LI61 65 aa5.73□□□□□ -1.49
CTDSP1-207ENST00000473420 KRTAP6-1Q3LI64 71 aa5.71□□□□□ -1.5
CTDSP1-207ENST00000473420 SYNE1Q8NF91 8797 aaKnown RBP5.71□□□□□ -1.5
CTDSP1-207ENST00000473420 KRTAP5-3Q6L8H2 238 aa5.56□□□□□ -1.52
CTDSP1-207ENST00000473420 GPR98Q8WXG9 6306 aa5.54□□□□□ -1.52
CTDSP1-207ENST00000473420 AHNAK2Q8IVF2 5795 aa5.45□□□□□ -1.54
CTDSP1-207ENST00000473420 KRTAP5-2Q701N4 177 aa5.44□□□□□ -1.54
CTDSP1-207ENST00000473420 KRTAP4-2Q9BYR5 136 aa5.4□□□□□ -1.54
CTDSP1-207ENST00000473420 KRTAP6-2Q3LI66 62 aa5.37□□□□□ -1.55
CTDSP1-207ENST00000473420 KRTAP5-10Q6L8G5 202 aa5.37□□□□□ -1.55
CTDSP1-207ENST00000473420 MT3P25713 68 aa5.28□□□□□ -1.56
CTDSP1-207ENST00000473420 KRTAP4-11Q9BYQ6 195 aa5.26□□□□□ -1.57
CTDSP1-207ENST00000473420 LUZP6Q538Z0 58 aa5.12□□□□□ -1.59
CTDSP1-207ENST00000473420 KRTAP5-7Q6L8G8 165 aa5.12□□□□□ -1.59
CTDSP1-207ENST00000473420 KRTAP5-8O75690 187 aa4.95□□□□□ -1.62
CTDSP1-207ENST00000473420 OBSCNQ5VST9 7968 aa4.9□□□□□ -1.62
CTDSP1-207ENST00000473420 KRTAP5-1Q6L8H4 278 aa4.78□□□□□ -1.64
CTDSP1-207ENST00000473420 LCE1EQ5T753 118 aa4.77□□□□□ -1.65
CTDSP1-207ENST00000473420 H3BS24 57 aa4.73□□□□□ -1.65
CTDSP1-207ENST00000473420 LCE3DQ9BYE3 92 aa4.65□□□□□ -1.67
CTDSP1-207ENST00000473420 MUC5ACP98088 5654 aa4.59□□□□□ -1.67
CTDSP1-207ENST00000473420 NDUFAF8A1L188 74 aa4.49□□□□□ -1.69
CTDSP1-207ENST00000473420 LCE3EQ5T5B0 92 aa4.45□□□□□ -1.7
CTDSP1-207ENST00000473420 MUC5BQ9HC84 5762 aaPredicted RBP4.44□□□□□ -1.7
CTDSP1-207ENST00000473420 LCE1CQ5T751 118 aa4.42□□□□□ -1.7
CTDSP1-207ENST00000473420 LCE1BQ5T7P3 118 aa4.42□□□□□ -1.7
CTDSP1-207ENST00000473420 AHNAKQ09666 5890 aaKnown RBP4.32□□□□□ -1.72
CTDSP1-207ENST00000473420 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.09□□□□□ -1.75
CTDSP1-207ENST00000473420 KRTAP5-11Q6L8G4 156 aa3.97□□□□□ -1.77
CTDSP1-207ENST00000473420 A0A0A0MQY5 61 aa3.79□□□□□ -1.8
CTDSP1-207ENST00000473420 KRTAP21-2Q3LI59 83 aa3.77□□□□□ -1.81
CTDSP1-207ENST00000473420 LCE1FQ5T754 118 aa3.77□□□□□ -1.81
CTDSP1-207ENST00000473420 INE1O15225 51 aa3.73□□□□□ -1.81
CTDSP1-207ENST00000473420 PRM1P04553 51 aa3.55□□□□□ -1.84
CTDSP1-207ENST00000473420 PHGR1C9JFL3 82 aa3.4□□□□□ -1.87
CTDSP1-207ENST00000473420 KRTAP4-4Q9BYR3 166 aa3.33□□□□□ -1.88
CTDSP1-207ENST00000473420 MUC19Q7Z5P9 8384 aa2.96□□□□□ -1.94
CTDSP1-207ENST00000473420 KRTAP21-1Q3LI58 79 aa2.36□□□□□ -2.03
CTDSP1-207ENST00000473420 MUC16Q8WXI7 14507 aa2.15□□□□□ -2.07
Retrieved 78 of 20,778 RNA–protein pairs in 12.5 ms