RNA–Protein interactions for RNA: ENST00000473243.5

ATP13A1-207, Transcript of ATPase 13A1, humanhuman

TSL 2

Gene ATP13A1, Length 4,729 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A1-207ENST00000473243 LCE3BQ5TA77 95 aa4.87□□□□□ -1.63
ATP13A1-207ENST00000473243 KRTAP19-7Q3SYF9 63 aa4.83□□□□□ -1.64
ATP13A1-207ENST00000473243 SPRR2DP22532 72 aa4.83□□□□□ -1.64
ATP13A1-207ENST00000473243 KRTAP9-2Q9BYQ4 174 aa4.82□□□□□ -1.64
ATP13A1-207ENST00000473243 LCE2DQ5TA82 110 aaPredicted RBP4.79□□□□□ -1.64
ATP13A1-207ENST00000473243 SYNE1Q8NF91 8797 aaKnown RBP4.78□□□□□ -1.64
ATP13A1-207ENST00000473243 MT1MQ8N339 61 aa4.76□□□□□ -1.65
ATP13A1-207ENST00000473243 KRTAP4-3Q9BYR4 195 aa4.73□□□□□ -1.65
ATP13A1-207ENST00000473243 USH2AO75445 5202 aa4.71□□□□□ -1.66
ATP13A1-207ENST00000473243 KRTAP12-4P60329 112 aa4.7□□□□□ -1.66
ATP13A1-207ENST00000473243 LOC100996750A0A140TA64 210 aa4.68□□□□□ -1.66
ATP13A1-207ENST00000473243 KRTAP9-6A0A140TA67 174 aa4.58□□□□□ -1.68
ATP13A1-207ENST00000473243 LCE3DQ9BYE3 92 aa4.55□□□□□ -1.68
ATP13A1-207ENST00000473243 KMT2DO14686 5537 aa4.55□□□□□ -1.68
ATP13A1-207ENST00000473243 KRTAP9-6A8MVA2 160 aa4.49□□□□□ -1.69
ATP13A1-207ENST00000473243 DSTQ03001 7570 aaKnown RBP4.49□□□□□ -1.69
ATP13A1-207ENST00000473243 FCGBPQ9Y6R7 5405 aaPredicted RBP4.48□□□□□ -1.69
ATP13A1-207ENST00000473243 LCE3EQ5T5B0 92 aa4.46□□□□□ -1.7
ATP13A1-207ENST00000473243 OBSCNQ5VST9 7968 aa4.43□□□□□ -1.7
ATP13A1-207ENST00000473243 SYNE2Q8WXH0 6885 aaKnown RBP4.41□□□□□ -1.7
ATP13A1-207ENST00000473243 KRTAP2-3P0C7H8 128 aa4.39□□□□□ -1.71
ATP13A1-207ENST00000473243 KRTAP2-4Q9BYR9 128 aa4.39□□□□□ -1.71
ATP13A1-207ENST00000473243 KRTAP2-1Q9BYU5 128 aa4.39□□□□□ -1.71
ATP13A1-207ENST00000473243 LCE5AQ5TCM9 118 aa4.37□□□□□ -1.71
ATP13A1-207ENST00000473243 SSPOA2VEC9 5147 aa4.35□□□□□ -1.71
ATP13A1-207ENST00000473243 MT1AP04731 61 aa4.33□□□□□ -1.72
ATP13A1-207ENST00000473243 MT3P25713 68 aa4.32□□□□□ -1.72
ATP13A1-207ENST00000473243 MT4P47944 62 aa4.31□□□□□ -1.72
ATP13A1-207ENST00000473243 LCE1AQ5T7P2 110 aa4.29□□□□□ -1.72
ATP13A1-207ENST00000473243 KRTAP9-7A8MTY7 169 aa4.27□□□□□ -1.73
ATP13A1-207ENST00000473243 MUC12Q9UKN1 5478 aa4.26□□□□□ -1.73
ATP13A1-207ENST00000473243 KRTAP4-9Q9BYQ8 210 aa4.26□□□□□ -1.73
ATP13A1-207ENST00000473243 KRTAP6-3Q3LI67 103 aa4.25□□□□□ -1.73
ATP13A1-207ENST00000473243 MACF1Q9UPN3 7388 aaKnown RBP4.24□□□□□ -1.73
ATP13A1-207ENST00000473243 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.23□□□□□ -1.73
ATP13A1-207ENST00000473243 KRTAP6-1Q3LI64 71 aa4.2□□□□□ -1.74
ATP13A1-207ENST00000473243 PRM1P04553 51 aa4.07□□□□□ -1.76
ATP13A1-207ENST00000473243 KRTAP6-2Q3LI66 62 aa4.03□□□□□ -1.76
ATP13A1-207ENST00000473243 KRTAP20-1Q3LI63 56 aa4.02□□□□□ -1.77
ATP13A1-207ENST00000473243 KRTAP9-4Q9BYQ2 154 aa4.02□□□□□ -1.77
ATP13A1-207ENST00000473243 LCE1DQ5T752 114 aa4□□□□□ -1.77
ATP13A1-207ENST00000473243 KRTAP5-9P26371 169 aa3.98□□□□□ -1.77
ATP13A1-207ENST00000473243 LCE1BQ5T7P3 118 aa3.95□□□□□ -1.78
ATP13A1-207ENST00000473243 LCE4AQ5TA78 99 aa3.87□□□□□ -1.79
ATP13A1-207ENST00000473243 KRTAP2-2Q9BYT5 123 aa3.87□□□□□ -1.79
ATP13A1-207ENST00000473243 MDN1Q9NU22 5596 aa3.83□□□□□ -1.8
ATP13A1-207ENST00000473243 NEBP20929 6669 aa3.67□□□□□ -1.82
ATP13A1-207ENST00000473243 KRTAP4-6Q9BYQ5 205 aa3.62□□□□□ -1.83
ATP13A1-207ENST00000473243 KRTAP20-2Q3LI61 65 aa3.51□□□□□ -1.85
ATP13A1-207ENST00000473243 KRTAP5-5Q701N2 237 aaPredicted RBP3.48□□□□□ -1.85
ATP13A1-207ENST00000473243 GPR98Q8WXG9 6306 aa3.4□□□□□ -1.86
ATP13A1-207ENST00000473243 MUC19Q7Z5P9 8384 aa3.28□□□□□ -1.88
ATP13A1-207ENST00000473243 KRTAP5-4Q6L8H1 288 aa3.26□□□□□ -1.89
ATP13A1-207ENST00000473243 KRTAP9-9Q9BYP9 154 aa3.16□□□□□ -1.9
ATP13A1-207ENST00000473243 LCE1CQ5T751 118 aa3.15□□□□□ -1.91
ATP13A1-207ENST00000473243 LCE1EQ5T753 118 aa3.15□□□□□ -1.91
ATP13A1-207ENST00000473243 LCE1FQ5T754 118 aa3.15□□□□□ -1.91
ATP13A1-207ENST00000473243 KRTAP4-11Q9BYQ6 195 aa3.11□□□□□ -1.91
ATP13A1-207ENST00000473243 MUC5ACP98088 5654 aa3.1□□□□□ -1.91
ATP13A1-207ENST00000473243 HMCN1Q96RW7 5635 aa3.01□□□□□ -1.93
ATP13A1-207ENST00000473243 KRTAP4-4Q9BYR3 166 aa2.91□□□□□ -1.94
ATP13A1-207ENST00000473243 KRTAP4-12Q9BQ66 201 aa2.9□□□□□ -1.95
ATP13A1-207ENST00000473243 KRTAP4-2Q9BYR5 136 aa2.9□□□□□ -1.95
ATP13A1-207ENST00000473243 KRTAP5-3Q6L8H2 238 aa2.9□□□□□ -1.95
ATP13A1-207ENST00000473243 KRTAP5-2Q701N4 177 aa2.88□□□□□ -1.95
ATP13A1-207ENST00000473243 AHNAK2Q8IVF2 5795 aa2.75□□□□□ -1.97
ATP13A1-207ENST00000473243 KRTAP5-8O75690 187 aa2.69□□□□□ -1.98
ATP13A1-207ENST00000473243 KRTAP5-10Q6L8G5 202 aa2.63□□□□□ -1.99
ATP13A1-207ENST00000473243 KRTAP5-1Q6L8H4 278 aa2.54□□□□□ -2
ATP13A1-207ENST00000473243 KRTAP5-11Q6L8G4 156 aa2.38□□□□□ -2.03
ATP13A1-207ENST00000473243 KRTAP21-2Q3LI59 83 aa2.37□□□□□ -2.03
ATP13A1-207ENST00000473243 MUC5BQ9HC84 5762 aaPredicted RBP2.37□□□□□ -2.03
ATP13A1-207ENST00000473243 AHNAKQ09666 5890 aaKnown RBP2.32□□□□□ -2.04
ATP13A1-207ENST00000473243 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.27□□□□□ -2.05
ATP13A1-207ENST00000473243 KRTAP5-7Q6L8G8 165 aa2.17□□□□□ -2.06
ATP13A1-207ENST00000473243 PHGR1C9JFL3 82 aa2.08□□□□□ -2.08
ATP13A1-207ENST00000473243 KRTAP21-1Q3LI58 79 aa1.95□□□□□ -2.1
ATP13A1-207ENST00000473243 MUC16Q8WXI7 14507 aa1.36□□□□□ -2.19
Retrieved 78 of 20,778 RNA–protein pairs in 177.1 ms