RNA–Protein interactions for RNA: ENST00000472714.1

LAMB1-209, Transcript of laminin subunit beta 1, humanhuman

TSL 2

Gene LAMB1, Length 1,540 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMB1-209ENST00000472714 HERC1Q15751 4861 aa1.98□□□□□ -2.09
LAMB1-209ENST00000472714 HMCN2Q8NDA2 5059 aa1.97□□□□□ -2.09
LAMB1-209ENST00000472714 KRTAP6-3Q3LI67 103 aa1.96□□□□□ -2.09
LAMB1-209ENST00000472714 C9orf92A6NGG3 77 aa1.95□□□□□ -2.1
LAMB1-209ENST00000472714 RPS29P62273 56 aaKnown RBP1.95□□□□□ -2.1
LAMB1-209ENST00000472714 A0A0D9SG42 100 aa1.94□□□□□ -2.1
LAMB1-209ENST00000472714 LPAP08519 4548 aa1.92□□□□□ -2.1
LAMB1-209ENST00000472714 KRTAP12-4P60329 112 aa1.92□□□□□ -2.1
LAMB1-209ENST00000472714 LRP2P98164 4655 aa1.9□□□□□ -2.11
LAMB1-209ENST00000472714 DMBT1Q9UGM3 2413 aaPredicted RBP1.89□□□□□ -2.11
LAMB1-209ENST00000472714 MUC19Q7Z5P9 8384 aa1.89□□□□□ -2.11
LAMB1-209ENST00000472714 MUC17Q685J3 4493 aa1.87□□□□□ -2.11
LAMB1-209ENST00000472714 KRTAP4-1Q9BYQ7 146 aa1.86□□□□□ -2.11
LAMB1-209ENST00000472714 UBR4Q5T4S7 5183 aa1.85□□□□□ -2.11
LAMB1-209ENST00000472714 KRTAP5-7Q6L8G8 165 aa1.85□□□□□ -2.11
LAMB1-209ENST00000472714 RNF213Q63HN8 5207 aa1.83□□□□□ -2.12
LAMB1-209ENST00000472714 MUC2Q02817 5179 aa1.78□□□□□ -2.12
LAMB1-209ENST00000472714 KRTAP19-2Q3LHN2 52 aa1.78□□□□□ -2.12
LAMB1-209ENST00000472714 FAT4Q6V0I7 4981 aa1.78□□□□□ -2.12
LAMB1-209ENST00000472714 M0QZ58 72 aa1.75□□□□□ -2.13
LAMB1-209ENST00000472714 MT1HP80294 61 aa1.73□□□□□ -2.13
LAMB1-209ENST00000472714 KRTAP12-3P60328 96 aa1.72□□□□□ -2.13
LAMB1-209ENST00000472714 FLGP20930 4061 aaPredicted RBP1.69□□□□□ -2.14
LAMB1-209ENST00000472714 M0R2T5 61 aa1.68□□□□□ -2.14
LAMB1-209ENST00000472714 MT2AP02795 61 aa1.65□□□□□ -2.15
LAMB1-209ENST00000472714 MT1FP04733 61 aa1.65□□□□□ -2.15
LAMB1-209ENST00000472714 KRTAP21-2Q3LI59 83 aa1.64□□□□□ -2.15
LAMB1-209ENST00000472714 TNP1P09430 55 aa1.59□□□□□ -2.16
LAMB1-209ENST00000472714 MT1BP07438 61 aa1.55□□□□□ -2.16
LAMB1-209ENST00000472714 SPRR2GQ9BYE4 73 aa1.55□□□□□ -2.16
LAMB1-209ENST00000472714 USH2AO75445 5202 aa1.54□□□□□ -2.16
LAMB1-209ENST00000472714 KRTAP19-8Q3LI54 63 aa1.53□□□□□ -2.16
LAMB1-209ENST00000472714 SSPOA2VEC9 5147 aa1.5□□□□□ -2.17
LAMB1-209ENST00000472714 KRTAP2-3P0C7H8 128 aa1.49□□□□□ -2.17
LAMB1-209ENST00000472714 KRTAP2-4Q9BYR9 128 aa1.49□□□□□ -2.17
LAMB1-209ENST00000472714 KRTAP2-1Q9BYU5 128 aa1.49□□□□□ -2.17
LAMB1-209ENST00000472714 MT1XP80297 61 aa1.48□□□□□ -2.17
LAMB1-209ENST00000472714 KRTAP19-6Q3LI70 58 aa1.47□□□□□ -2.17
LAMB1-209ENST00000472714 FSIP2Q5CZC0 6907 aa1.46□□□□□ -2.18
LAMB1-209ENST00000472714 CRCT1Q9UGL9 99 aa1.46□□□□□ -2.18
LAMB1-209ENST00000472714 FCGBPQ9Y6R7 5405 aaPredicted RBP1.45□□□□□ -2.18
LAMB1-209ENST00000472714 PRM1P04553 51 aa1.37□□□□□ -2.19
LAMB1-209ENST00000472714 KMT2DO14686 5537 aa1.37□□□□□ -2.19
LAMB1-209ENST00000472714 MACF1Q9UPN3 7388 aaKnown RBP1.35□□□□□ -2.19
LAMB1-209ENST00000472714 KRTAP8-1Q8IUC2 63 aa1.33□□□□□ -2.2
LAMB1-209ENST00000472714 KRTAP19-5Q3LI72 72 aa1.32□□□□□ -2.2
LAMB1-209ENST00000472714 KRTAP19-7Q3SYF9 63 aa1.31□□□□□ -2.2
LAMB1-209ENST00000472714 SPRR2FQ96RM1 72 aa1.3□□□□□ -2.2
LAMB1-209ENST00000472714 MUC12Q9UKN1 5478 aa1.3□□□□□ -2.2
LAMB1-209ENST00000472714 SYNE2Q8WXH0 6885 aaKnown RBP1.3□□□□□ -2.2
LAMB1-209ENST00000472714 MT1EP04732 61 aa1.29□□□□□ -2.2
LAMB1-209ENST00000472714 MDN1Q9NU22 5596 aa1.29□□□□□ -2.2
LAMB1-209ENST00000472714 SPRR2EP22531 72 aa1.25□□□□□ -2.21
LAMB1-209ENST00000472714 SPRR2BP35325 72 aa1.25□□□□□ -2.21
LAMB1-209ENST00000472714 SPRR2AP35326 72 aa1.25□□□□□ -2.21
LAMB1-209ENST00000472714 MT1LQ93083 61 aa1.25□□□□□ -2.21
LAMB1-209ENST00000472714 KRTAP19-3Q7Z4W3 81 aa1.25□□□□□ -2.21
LAMB1-209ENST00000472714 NEBP20929 6669 aa1.24□□□□□ -2.21
LAMB1-209ENST00000472714 SPRR2DP22532 72 aa1.21□□□□□ -2.22
LAMB1-209ENST00000472714 MT1MQ8N339 61 aa1.21□□□□□ -2.22
LAMB1-209ENST00000472714 MT1GP13640 62 aa1.2□□□□□ -2.22
LAMB1-209ENST00000472714 KRTAP20-1Q3LI63 56 aa1.15□□□□□ -2.22
LAMB1-209ENST00000472714 DSTQ03001 7570 aaKnown RBP1.12□□□□□ -2.23
LAMB1-209ENST00000472714 SYNE1Q8NF91 8797 aaKnown RBP1.12□□□□□ -2.23
LAMB1-209ENST00000472714 MT1AP04731 61 aa1.09□□□□□ -2.24
LAMB1-209ENST00000472714 MUC5BQ9HC84 5762 aaPredicted RBP1.09□□□□□ -2.24
LAMB1-209ENST00000472714 KRTAP6-1Q3LI64 71 aa1.07□□□□□ -2.24
LAMB1-209ENST00000472714 MT4P47944 62 aa1.06□□□□□ -2.24
LAMB1-209ENST00000472714 KRTAP6-2Q3LI66 62 aa1.06□□□□□ -2.24
LAMB1-209ENST00000472714 KRTAP21-1Q3LI58 79 aa1.01□□□□□ -2.25
LAMB1-209ENST00000472714 KRTAP20-2Q3LI61 65 aa1.01□□□□□ -2.25
LAMB1-209ENST00000472714 AHNAK2Q8IVF2 5795 aa0.99□□□□□ -2.25
LAMB1-209ENST00000472714 KRTAP5-10Q6L8G5 202 aa0.9□□□□□ -2.26
LAMB1-209ENST00000472714 GPR98Q8WXG9 6306 aa0.9□□□□□ -2.27
LAMB1-209ENST00000472714 AHNAKQ09666 5890 aaKnown RBP0.85□□□□□ -2.27
LAMB1-209ENST00000472714 MUC16Q8WXI7 14507 aa0.85□□□□□ -2.27
LAMB1-209ENST00000472714 MUC5ACP98088 5654 aa0.83□□□□□ -2.28
LAMB1-209ENST00000472714 PHGR1C9JFL3 82 aa0.59□□□□□ -2.31
Retrieved 78 of 20,778 RNA–protein pairs in 6.1 ms