RNA–Protein interactions for RNA: ENST00000472710.2

LRRC41-203, Transcript of leucine rich repeat containing 41, humanhuman

TSL 2

Gene LRRC41, Length 4,455 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC41-203ENST00000472710 SPRR2AP35326 72 aa3.41□□□□□ -1.86
LRRC41-203ENST00000472710 SYNE1Q8NF91 8797 aaKnown RBP3.41□□□□□ -1.86
LRRC41-203ENST00000472710 LCE3BQ5TA77 95 aa3.41□□□□□ -1.86
LRRC41-203ENST00000472710 KRTAP19-7Q3SYF9 63 aa3.38□□□□□ -1.87
LRRC41-203ENST00000472710 KRTAP2-3P0C7H8 128 aa3.37□□□□□ -1.87
LRRC41-203ENST00000472710 MT3P25713 68 aa3.37□□□□□ -1.87
LRRC41-203ENST00000472710 KRTAP2-4Q9BYR9 128 aa3.37□□□□□ -1.87
LRRC41-203ENST00000472710 KRTAP2-1Q9BYU5 128 aa3.37□□□□□ -1.87
LRRC41-203ENST00000472710 GPR98Q8WXG9 6306 aa3.36□□□□□ -1.87
LRRC41-203ENST00000472710 SPRR2DP22532 72 aa3.33□□□□□ -1.88
LRRC41-203ENST00000472710 KRTAP9-6A8MVA2 160 aa3.33□□□□□ -1.88
LRRC41-203ENST00000472710 KRTAP19-3Q7Z4W3 81 aa3.33□□□□□ -1.88
LRRC41-203ENST00000472710 KRTAP9-6A0A140TA67 174 aa3.3□□□□□ -1.88
LRRC41-203ENST00000472710 LOC100996750A0A140TA64 210 aa3.28□□□□□ -1.88
LRRC41-203ENST00000472710 LCE3DQ9BYE3 92 aa3.27□□□□□ -1.89
LRRC41-203ENST00000472710 MT1MQ8N339 61 aa3.27□□□□□ -1.89
LRRC41-203ENST00000472710 KRTAP4-3Q9BYR4 195 aa3.26□□□□□ -1.89
LRRC41-203ENST00000472710 LCE3EQ5T5B0 92 aa3.23□□□□□ -1.89
LRRC41-203ENST00000472710 KRTAP19-6Q3LI70 58 aa3.21□□□□□ -1.9
LRRC41-203ENST00000472710 MACF1Q9UPN3 7388 aaKnown RBP3.21□□□□□ -1.9
LRRC41-203ENST00000472710 KRTAP20-1Q3LI63 56 aa3.11□□□□□ -1.91
LRRC41-203ENST00000472710 PRM1P04553 51 aa3.11□□□□□ -1.91
LRRC41-203ENST00000472710 SYNE2Q8WXH0 6885 aaKnown RBP3.1□□□□□ -1.91
LRRC41-203ENST00000472710 OBSCNQ5VST9 7968 aa3.1□□□□□ -1.91
LRRC41-203ENST00000472710 KRTAP9-7A8MTY7 169 aa3.09□□□□□ -1.92
LRRC41-203ENST00000472710 KMT2DO14686 5537 aa3.08□□□□□ -1.92
LRRC41-203ENST00000472710 KRTAP4-9Q9BYQ8 210 aa3.06□□□□□ -1.92
LRRC41-203ENST00000472710 USH2AO75445 5202 aa3.04□□□□□ -1.92
LRRC41-203ENST00000472710 MT1AP04731 61 aa3.01□□□□□ -1.93
LRRC41-203ENST00000472710 DSTQ03001 7570 aaKnown RBP2.99□□□□□ -1.93
LRRC41-203ENST00000472710 FCGBPQ9Y6R7 5405 aaPredicted RBP2.97□□□□□ -1.93
LRRC41-203ENST00000472710 LCE5AQ5TCM9 118 aa2.95□□□□□ -1.94
LRRC41-203ENST00000472710 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.94□□□□□ -1.94
LRRC41-203ENST00000472710 KRTAP6-1Q3LI64 71 aa2.93□□□□□ -1.94
LRRC41-203ENST00000472710 MT4P47944 62 aa2.91□□□□□ -1.94
LRRC41-203ENST00000472710 LCE1AQ5T7P2 110 aa2.88□□□□□ -1.95
LRRC41-203ENST00000472710 LCE1EQ5T753 118 aa2.85□□□□□ -1.95
LRRC41-203ENST00000472710 KRTAP6-2Q3LI66 62 aa2.81□□□□□ -1.96
LRRC41-203ENST00000472710 KRTAP2-2Q9BYT5 123 aa2.81□□□□□ -1.96
LRRC41-203ENST00000472710 MUC12Q9UKN1 5478 aa2.8□□□□□ -1.96
LRRC41-203ENST00000472710 LCE1FQ5T754 118 aa2.8□□□□□ -1.96
LRRC41-203ENST00000472710 SSPOA2VEC9 5147 aa2.78□□□□□ -1.96
LRRC41-203ENST00000472710 KRTAP9-4Q9BYQ2 154 aa2.78□□□□□ -1.97
LRRC41-203ENST00000472710 KRTAP6-3Q3LI67 103 aa2.76□□□□□ -1.97
LRRC41-203ENST00000472710 LCE1BQ5T7P3 118 aa2.72□□□□□ -1.97
LRRC41-203ENST00000472710 MUC19Q7Z5P9 8384 aa2.71□□□□□ -1.98
LRRC41-203ENST00000472710 LCE1DQ5T752 114 aa2.69□□□□□ -1.98
LRRC41-203ENST00000472710 MDN1Q9NU22 5596 aa2.67□□□□□ -1.98
LRRC41-203ENST00000472710 NEBP20929 6669 aa2.62□□□□□ -1.99
LRRC41-203ENST00000472710 LCE1CQ5T751 118 aa2.57□□□□□ -2
LRRC41-203ENST00000472710 LCE4AQ5TA78 99 aa2.57□□□□□ -2
LRRC41-203ENST00000472710 KRTAP5-5Q701N2 237 aaPredicted RBP2.56□□□□□ -2
LRRC41-203ENST00000472710 KRTAP9-9Q9BYP9 154 aa2.52□□□□□ -2.01
LRRC41-203ENST00000472710 KRTAP5-9P26371 169 aa2.51□□□□□ -2.01
LRRC41-203ENST00000472710 KRTAP4-6Q9BYQ5 205 aa2.31□□□□□ -2.04
LRRC41-203ENST00000472710 KRTAP4-11Q9BYQ6 195 aa2.29□□□□□ -2.04
LRRC41-203ENST00000472710 KRTAP20-2Q3LI61 65 aa2.26□□□□□ -2.05
LRRC41-203ENST00000472710 AHNAK2Q8IVF2 5795 aa2.19□□□□□ -2.06
LRRC41-203ENST00000472710 KRTAP5-4Q6L8H1 288 aa2.14□□□□□ -2.07
LRRC41-203ENST00000472710 MUC5ACP98088 5654 aa2.02□□□□□ -2.09
LRRC41-203ENST00000472710 HMCN1Q96RW7 5635 aa1.98□□□□□ -2.09
LRRC41-203ENST00000472710 KRTAP5-3Q6L8H2 238 aa1.98□□□□□ -2.09
LRRC41-203ENST00000472710 KRTAP4-4Q9BYR3 166 aa1.96□□□□□ -2.1
LRRC41-203ENST00000472710 KRTAP5-10Q6L8G5 202 aa1.95□□□□□ -2.1
LRRC41-203ENST00000472710 KRTAP5-2Q701N4 177 aa1.95□□□□□ -2.1
LRRC41-203ENST00000472710 KRTAP4-2Q9BYR5 136 aa1.92□□□□□ -2.1
LRRC41-203ENST00000472710 AHNAKQ09666 5890 aaKnown RBP1.9□□□□□ -2.11
LRRC41-203ENST00000472710 KRTAP4-12Q9BQ66 201 aa1.87□□□□□ -2.11
LRRC41-203ENST00000472710 KRTAP5-8O75690 187 aa1.78□□□□□ -2.12
LRRC41-203ENST00000472710 MUC5BQ9HC84 5762 aaPredicted RBP1.75□□□□□ -2.13
LRRC41-203ENST00000472710 PHGR1C9JFL3 82 aa1.74□□□□□ -2.13
LRRC41-203ENST00000472710 KRTAP5-1Q6L8H4 278 aa1.72□□□□□ -2.13
LRRC41-203ENST00000472710 KRTAP21-2Q3LI59 83 aa1.68□□□□□ -2.14
LRRC41-203ENST00000472710 KRTAP21-1Q3LI58 79 aa1.61□□□□□ -2.15
LRRC41-203ENST00000472710 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.6□□□□□ -2.15
LRRC41-203ENST00000472710 KRTAP5-11Q6L8G4 156 aa1.6□□□□□ -2.15
LRRC41-203ENST00000472710 KRTAP5-7Q6L8G8 165 aa1.57□□□□□ -2.16
LRRC41-203ENST00000472710 MUC16Q8WXI7 14507 aa0.87□□□□□ -2.27
Retrieved 78 of 20,778 RNA–protein pairs in 47.7 ms