RNA–Protein interactions for RNA: ENST00000472155.5

UBXN11-213, Transcript of UBX domain protein 11, humanhuman

TSL 1 (best)

Gene UBXN11, Length 2,646 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-213ENST00000472155 LCE2DQ5TA82 110 aaPredicted RBP5.15□□□□□ -1.58
UBXN11-213ENST00000472155 DSTQ03001 7570 aaKnown RBP5.13□□□□□ -1.59
UBXN11-213ENST00000472155 KRTAP4-3Q9BYR4 195 aa5.13□□□□□ -1.59
UBXN11-213ENST00000472155 SYNE2Q8WXH0 6885 aaKnown RBP5.08□□□□□ -1.6
UBXN11-213ENST00000472155 LOC100996750A0A140TA64 210 aa5.06□□□□□ -1.6
UBXN11-213ENST00000472155 KRTAP9-2Q9BYQ4 174 aa5.01□□□□□ -1.61
UBXN11-213ENST00000472155 MDN1Q9NU22 5596 aa4.97□□□□□ -1.61
UBXN11-213ENST00000472155 MT1GP13640 62 aa4.97□□□□□ -1.61
UBXN11-213ENST00000472155 KRTAP19-3Q7Z4W3 81 aa4.97□□□□□ -1.61
UBXN11-213ENST00000472155 MT1MQ8N339 61 aa4.96□□□□□ -1.61
UBXN11-213ENST00000472155 KRTAP2-3P0C7H8 128 aa4.94□□□□□ -1.62
UBXN11-213ENST00000472155 SPRR2FQ96RM1 72 aa4.94□□□□□ -1.62
UBXN11-213ENST00000472155 KRTAP2-4Q9BYR9 128 aa4.94□□□□□ -1.62
UBXN11-213ENST00000472155 KRTAP2-1Q9BYU5 128 aa4.94□□□□□ -1.62
UBXN11-213ENST00000472155 KRTAP19-4Q3LI73 84 aa4.92□□□□□ -1.62
UBXN11-213ENST00000472155 CRCT1Q9UGL9 99 aa4.9□□□□□ -1.62
UBXN11-213ENST00000472155 LCE5AQ5TCM9 118 aa4.84□□□□□ -1.63
UBXN11-213ENST00000472155 SYNE1Q8NF91 8797 aaKnown RBP4.69□□□□□ -1.66
UBXN11-213ENST00000472155 LCE1AQ5T7P2 110 aa4.63□□□□□ -1.67
UBXN11-213ENST00000472155 KRTAP9-6A0A140TA67 174 aa4.62□□□□□ -1.67
UBXN11-213ENST00000472155 KRTAP5-9P26371 169 aa4.59□□□□□ -1.67
UBXN11-213ENST00000472155 LCE3BQ5TA77 95 aa4.54□□□□□ -1.68
UBXN11-213ENST00000472155 SPRR2EP22531 72 aa4.53□□□□□ -1.68
UBXN11-213ENST00000472155 SPRR2BP35325 72 aa4.53□□□□□ -1.68
UBXN11-213ENST00000472155 SPRR2AP35326 72 aa4.53□□□□□ -1.68
UBXN11-213ENST00000472155 KRTAP6-1Q3LI64 71 aa4.51□□□□□ -1.69
UBXN11-213ENST00000472155 KRTAP4-9Q9BYQ8 210 aa4.49□□□□□ -1.69
UBXN11-213ENST00000472155 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.46□□□□□ -1.7
UBXN11-213ENST00000472155 KRTAP5-5Q701N2 237 aaPredicted RBP4.4□□□□□ -1.7
UBXN11-213ENST00000472155 MT1AP04731 61 aa4.38□□□□□ -1.71
UBXN11-213ENST00000472155 KRTAP12-4P60329 112 aa4.36□□□□□ -1.71
UBXN11-213ENST00000472155 OBSCNQ5VST9 7968 aa4.35□□□□□ -1.71
UBXN11-213ENST00000472155 SPRR2DP22532 72 aa4.32□□□□□ -1.72
UBXN11-213ENST00000472155 KRTAP6-3Q3LI67 103 aa4.28□□□□□ -1.72
UBXN11-213ENST00000472155 KRTAP9-7A8MTY7 169 aa4.23□□□□□ -1.73
UBXN11-213ENST00000472155 NEBP20929 6669 aa4.19□□□□□ -1.74
UBXN11-213ENST00000472155 KRTAP9-4Q9BYQ2 154 aa4.15□□□□□ -1.75
UBXN11-213ENST00000472155 LCE3DQ9BYE3 92 aa4.13□□□□□ -1.75
UBXN11-213ENST00000472155 KRTAP6-2Q3LI66 62 aa4.08□□□□□ -1.76
UBXN11-213ENST00000472155 LCE3EQ5T5B0 92 aa4.04□□□□□ -1.76
UBXN11-213ENST00000472155 KRTAP5-4Q6L8H1 288 aa3.93□□□□□ -1.78
UBXN11-213ENST00000472155 KRTAP4-6Q9BYQ5 205 aa3.92□□□□□ -1.78
UBXN11-213ENST00000472155 MT3P25713 68 aa3.92□□□□□ -1.78
UBXN11-213ENST00000472155 MT4P47944 62 aa3.89□□□□□ -1.79
UBXN11-213ENST00000472155 HMCN1Q96RW7 5635 aa3.85□□□□□ -1.79
UBXN11-213ENST00000472155 PRM1P04553 51 aa3.84□□□□□ -1.79
UBXN11-213ENST00000472155 KRTAP20-2Q3LI61 65 aa3.74□□□□□ -1.81
UBXN11-213ENST00000472155 KRTAP20-1Q3LI63 56 aa3.72□□□□□ -1.81
UBXN11-213ENST00000472155 KRTAP2-2Q9BYT5 123 aa3.7□□□□□ -1.82
UBXN11-213ENST00000472155 LCE1DQ5T752 114 aa3.67□□□□□ -1.82
UBXN11-213ENST00000472155 LCE4AQ5TA78 99 aa3.67□□□□□ -1.82
UBXN11-213ENST00000472155 KRTAP5-2Q701N4 177 aa3.64□□□□□ -1.83
UBXN11-213ENST00000472155 KRTAP5-3Q6L8H2 238 aa3.57□□□□□ -1.84
UBXN11-213ENST00000472155 MUC5ACP98088 5654 aa3.47□□□□□ -1.85
UBXN11-213ENST00000472155 LCE1BQ5T7P3 118 aa3.29□□□□□ -1.88
UBXN11-213ENST00000472155 LCE1EQ5T753 118 aa3.28□□□□□ -1.88
UBXN11-213ENST00000472155 LCE1FQ5T754 118 aa3.18□□□□□ -1.9
UBXN11-213ENST00000472155 KRTAP5-1Q6L8H4 278 aa3.17□□□□□ -1.9
UBXN11-213ENST00000472155 KRTAP4-2Q9BYR5 136 aa3.16□□□□□ -1.9
UBXN11-213ENST00000472155 AHNAK2Q8IVF2 5795 aa3.15□□□□□ -1.9
UBXN11-213ENST00000472155 KRTAP9-9Q9BYP9 154 aa3.14□□□□□ -1.91
UBXN11-213ENST00000472155 KRTAP4-11Q9BYQ6 195 aa3.13□□□□□ -1.91
UBXN11-213ENST00000472155 KRTAP5-10Q6L8G5 202 aa3.11□□□□□ -1.91
UBXN11-213ENST00000472155 LCE1CQ5T751 118 aa3.06□□□□□ -1.92
UBXN11-213ENST00000472155 KRTAP5-8O75690 187 aa3.02□□□□□ -1.93
UBXN11-213ENST00000472155 GPR98Q8WXG9 6306 aa2.96□□□□□ -1.93
UBXN11-213ENST00000472155 MUC5BQ9HC84 5762 aaPredicted RBP2.91□□□□□ -1.94
UBXN11-213ENST00000472155 KRTAP21-2Q3LI59 83 aa2.9□□□□□ -1.94
UBXN11-213ENST00000472155 KRTAP5-7Q6L8G8 165 aa2.86□□□□□ -1.95
UBXN11-213ENST00000472155 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.86□□□□□ -1.95
UBXN11-213ENST00000472155 KRTAP4-4Q9BYR3 166 aa2.76□□□□□ -1.97
UBXN11-213ENST00000472155 KRTAP4-12Q9BQ66 201 aa2.69□□□□□ -1.98
UBXN11-213ENST00000472155 MUC19Q7Z5P9 8384 aa2.67□□□□□ -1.98
UBXN11-213ENST00000472155 KRTAP5-11Q6L8G4 156 aa2.65□□□□□ -1.99
UBXN11-213ENST00000472155 AHNAKQ09666 5890 aaKnown RBP2.4□□□□□ -2.02
UBXN11-213ENST00000472155 KRTAP21-1Q3LI58 79 aa2.38□□□□□ -2.03
UBXN11-213ENST00000472155 PHGR1C9JFL3 82 aa2.32□□□□□ -2.04
UBXN11-213ENST00000472155 MUC16Q8WXI7 14507 aa1.54□□□□□ -2.16
Retrieved 78 of 20,778 RNA–protein pairs in 116.6 ms