RNA–Protein interactions for RNA: ENST00000471488.1

HDAC1-204, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-204ENST00000471488 KRTAP25-1Q3LHN0 102 aa2.65□□□□□ -1.99
HDAC1-204ENST00000471488 KRTAP5-10Q6L8G5 202 aa2.62□□□□□ -1.99
HDAC1-204ENST00000471488 LCE5AQ5TCM9 118 aa2.61□□□□□ -1.99
HDAC1-204ENST00000471488 UQCR11O14957 56 aa2.6□□□□□ -1.99
HDAC1-204ENST00000471488 LCE4AQ5TA78 99 aa2.6□□□□□ -1.99
HDAC1-204ENST00000471488 LUZP6Q538Z0 58 aa2.59□□□□□ -1.99
HDAC1-204ENST00000471488 KRTAP19-3Q7Z4W3 81 aa2.59□□□□□ -1.99
HDAC1-204ENST00000471488 K7ERS5 55 aa2.58□□□□□ -2
HDAC1-204ENST00000471488 DMAC1Q96GE9 116 aa2.58□□□□□ -2
HDAC1-204ENST00000471488 NDUFAF8A1L188 74 aa2.55□□□□□ -2
HDAC1-204ENST00000471488 MT1EP04732 61 aa2.55□□□□□ -2
HDAC1-204ENST00000471488 KRTAP5-7Q6L8G8 165 aa2.55□□□□□ -2
HDAC1-204ENST00000471488 KRTAP4-6Q9BYQ5 205 aa2.55□□□□□ -2
HDAC1-204ENST00000471488 KRTAP15-1Q3LI76 137 aa2.54□□□□□ -2
HDAC1-204ENST00000471488 KRTAP19-7Q3SYF9 63 aa2.54□□□□□ -2
HDAC1-204ENST00000471488 A0A1B0GU69 56 aa2.52□□□□□ -2.01
HDAC1-204ENST00000471488 KRTAP5-3Q6L8H2 238 aa2.52□□□□□ -2.01
HDAC1-204ENST00000471488 PP632Q6XCG6 107 aa2.52□□□□□ -2.01
HDAC1-204ENST00000471488 CAMK2N1Q7Z7J9 78 aa2.52□□□□□ -2.01
HDAC1-204ENST00000471488 KRTAP3-2Q9BYR7 98 aa2.51□□□□□ -2.01
HDAC1-204ENST00000471488 MT1GP13640 62 aa2.48□□□□□ -2.01
HDAC1-204ENST00000471488 ACYP2P14621 99 aa2.48□□□□□ -2.01
HDAC1-204ENST00000471488 KRTAP19-5Q3LI72 72 aa2.47□□□□□ -2.01
HDAC1-204ENST00000471488 KRTAP4-3Q9BYR4 195 aa2.47□□□□□ -2.01
HDAC1-204ENST00000471488 MT1MQ8N339 61 aa2.46□□□□□ -2.02
HDAC1-204ENST00000471488 SPINT4Q6UDR6 99 aa2.45□□□□□ -2.02
HDAC1-204ENST00000471488 A0A0D9SG42 100 aa2.44□□□□□ -2.02
HDAC1-204ENST00000471488 KRTAP5-4Q6L8H1 288 aa2.44□□□□□ -2.02
HDAC1-204ENST00000471488 KRTAP20-2Q3LI61 65 aa2.39□□□□□ -2.03
HDAC1-204ENST00000471488 MT1LQ93083 61 aa2.39□□□□□ -2.03
HDAC1-204ENST00000471488 A0A1B0GU33 70 aa2.37□□□□□ -2.03
HDAC1-204ENST00000471488 KRTAP13-4Q3LI77 160 aa2.34□□□□□ -2.03
HDAC1-204ENST00000471488 KRTAP12-4P60329 112 aa2.33□□□□□ -2.04
HDAC1-204ENST00000471488 KRTAP4-7Q9BYR0 210 aa2.32□□□□□ -2.04
HDAC1-204ENST00000471488 C10orf95Q9H7T3 257 aa2.31□□□□□ -2.04
HDAC1-204ENST00000471488 KRTAP23-1A1A580 65 aa2.3□□□□□ -2.04
HDAC1-204ENST00000471488 AHNAKQ09666 5890 aaKnown RBP2.29□□□□□ -2.04
HDAC1-204ENST00000471488 LCE3AQ5TA76 89 aa2.27□□□□□ -2.05
HDAC1-204ENST00000471488 KRTAP4-11Q9BYQ6 195 aa2.25□□□□□ -2.05
HDAC1-204ENST00000471488 MUC5ACP98088 5654 aa2.25□□□□□ -2.05
HDAC1-204ENST00000471488 MUC5BQ9HC84 5762 aaPredicted RBP2.23□□□□□ -2.05
HDAC1-204ENST00000471488 LOC100996750A0A140TA64 210 aa2.22□□□□□ -2.05
HDAC1-204ENST00000471488 KRTAP5-5Q701N2 237 aaPredicted RBP2.22□□□□□ -2.05
HDAC1-204ENST00000471488 KRTAP5-8O75690 187 aa2.21□□□□□ -2.06
HDAC1-204ENST00000471488 TNP1P09430 55 aa2.19□□□□□ -2.06
HDAC1-204ENST00000471488 SYNE1Q8NF91 8797 aaKnown RBP2.18□□□□□ -2.06
HDAC1-204ENST00000471488 KRTAP12-1P59990 96 aa2.17□□□□□ -2.06
HDAC1-204ENST00000471488 KRTAP12-3P60328 96 aa2.17□□□□□ -2.06
HDAC1-204ENST00000471488 INE1O15225 51 aa2.16□□□□□ -2.06
HDAC1-204ENST00000471488 KRTAP9-9Q9BYP9 154 aa2.16□□□□□ -2.06
HDAC1-204ENST00000471488 OBSCNQ5VST9 7968 aa2.12□□□□□ -2.07
HDAC1-204ENST00000471488 KRTAP5-2Q701N4 177 aa2.08□□□□□ -2.08
HDAC1-204ENST00000471488 KRTAP6-1Q3LI64 71 aa2.06□□□□□ -2.08
HDAC1-204ENST00000471488 KRTAP6-2Q3LI66 62 aa2.04□□□□□ -2.08
HDAC1-204ENST00000471488 MT1AP04731 61 aa2.02□□□□□ -2.09
HDAC1-204ENST00000471488 KRTAP9-4Q9BYQ2 154 aa1.99□□□□□ -2.09
HDAC1-204ENST00000471488 LCE3CQ5T5A8 94 aa1.95□□□□□ -2.1
HDAC1-204ENST00000471488 KRTAP5-1Q6L8H4 278 aa1.94□□□□□ -2.1
HDAC1-204ENST00000471488 MT3P25713 68 aa1.89□□□□□ -2.11
HDAC1-204ENST00000471488 KRTAP19-4Q3LI73 84 aa1.89□□□□□ -2.11
HDAC1-204ENST00000471488 KRTAP9-6A8MVA2 160 aa1.83□□□□□ -2.12
HDAC1-204ENST00000471488 LCE1BQ5T7P3 118 aa1.81□□□□□ -2.12
HDAC1-204ENST00000471488 KRTAP4-12Q9BQ66 201 aa1.74□□□□□ -2.13
HDAC1-204ENST00000471488 KRTAP4-2Q9BYR5 136 aa1.74□□□□□ -2.13
HDAC1-204ENST00000471488 LCE1EQ5T753 118 aa1.73□□□□□ -2.13
HDAC1-204ENST00000471488 LCE1CQ5T751 118 aa1.62□□□□□ -2.15
HDAC1-204ENST00000471488 PHGR1C9JFL3 82 aa1.61□□□□□ -2.15
HDAC1-204ENST00000471488 KRTAP5-11Q6L8G4 156 aa1.53□□□□□ -2.16
HDAC1-204ENST00000471488 LCE1FQ5T754 118 aa1.5□□□□□ -2.17
HDAC1-204ENST00000471488 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.39□□□□□ -2.19
HDAC1-204ENST00000471488 LCE3DQ9BYE3 92 aa1.36□□□□□ -2.19
HDAC1-204ENST00000471488 KRTAP4-4Q9BYR3 166 aa1.36□□□□□ -2.19
HDAC1-204ENST00000471488 KRTAP21-2Q3LI59 83 aa1.32□□□□□ -2.2
HDAC1-204ENST00000471488 MUC19Q7Z5P9 8384 aa1.31□□□□□ -2.2
HDAC1-204ENST00000471488 PRM1P04553 51 aa1.26□□□□□ -2.21
HDAC1-204ENST00000471488 LCE3EQ5T5B0 92 aa1.23□□□□□ -2.21
HDAC1-204ENST00000471488 KRTAP21-1Q3LI58 79 aa1.19□□□□□ -2.22
HDAC1-204ENST00000471488 MUC16Q8WXI7 14507 aa0.87□□□□□ -2.27
Retrieved 78 of 20,778 RNA–protein pairs in 110.9 ms