RNA–Protein interactions for RNA: ENST00000471440.6

CFHR3-205, Transcript of complement factor H related 3, humanhuman

TSL 1 (best) BASIC

Gene CFHR3, Length 1,965 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFHR3-205ENST00000471440 SERP1Q9Y6X1 66 aa1.96□□□□□ -2.1
CFHR3-205ENST00000471440 MT2AP02795 61 aa1.95□□□□□ -2.1
CFHR3-205ENST00000471440 H7BZZ5 65 aa1.94□□□□□ -2.1
CFHR3-205ENST00000471440 SPTSSBQ8NFR3 76 aa1.94□□□□□ -2.1
CFHR3-205ENST00000471440 H0YAA0 97 aa1.94□□□□□ -2.1
CFHR3-205ENST00000471440 CHKB-CPT1BH3BT56 60 aa1.93□□□□□ -2.1
CFHR3-205ENST00000471440 KRTAP12-1P59990 96 aa1.93□□□□□ -2.1
CFHR3-205ENST00000471440 MT1FP04733 61 aa1.92□□□□□ -2.1
CFHR3-205ENST00000471440 CYSTM1Q9H1C7 97 aa1.91□□□□□ -2.1
CFHR3-205ENST00000471440 ATP5EP56381 51 aaPredicted RBP1.9□□□□□ -2.1
CFHR3-205ENST00000471440 CRIPTQ9P021 101 aa1.9□□□□□ -2.1
CFHR3-205ENST00000471440 INE1O15225 51 aa1.87□□□□□ -2.11
CFHR3-205ENST00000471440 SPRR2GQ9BYE4 73 aa1.87□□□□□ -2.11
CFHR3-205ENST00000471440 KRTAP19-8Q3LI54 63 aa1.84□□□□□ -2.11
CFHR3-205ENST00000471440 CRCT1Q9UGL9 99 aa1.84□□□□□ -2.11
CFHR3-205ENST00000471440 FSIP2Q5CZC0 6907 aa1.84□□□□□ -2.12
CFHR3-205ENST00000471440 M0QZ58 72 aa1.83□□□□□ -2.12
CFHR3-205ENST00000471440 Q5VV11 94 aa1.83□□□□□ -2.12
CFHR3-205ENST00000471440 A0A1B0GU69 56 aa1.81□□□□□ -2.12
CFHR3-205ENST00000471440 MT1BP07438 61 aa1.8□□□□□ -2.12
CFHR3-205ENST00000471440 PRR15LQ9BU68 103 aa1.8□□□□□ -2.12
CFHR3-205ENST00000471440 KRTAP19-6Q3LI70 58 aa1.79□□□□□ -2.12
CFHR3-205ENST00000471440 PLAC4Q8WY50 150 aa1.79□□□□□ -2.12
CFHR3-205ENST00000471440 LINC01558Q9Y6Z2 57 aa1.79□□□□□ -2.12
CFHR3-205ENST00000471440 MUC5BQ9HC84 5762 aaPredicted RBP1.77□□□□□ -2.13
CFHR3-205ENST00000471440 USH2AO75445 5202 aa1.76□□□□□ -2.13
CFHR3-205ENST00000471440 AHNAKQ09666 5890 aaKnown RBP1.75□□□□□ -2.13
CFHR3-205ENST00000471440 SPATA8Q6RVD6 105 aa1.75□□□□□ -2.13
CFHR3-205ENST00000471440 UQCR11O14957 56 aa1.74□□□□□ -2.13
CFHR3-205ENST00000471440 A0A0D9SG42 100 aa1.72□□□□□ -2.13
CFHR3-205ENST00000471440 MUC19Q7Z5P9 8384 aa1.72□□□□□ -2.13
CFHR3-205ENST00000471440 MT1XP80297 61 aa1.71□□□□□ -2.14
CFHR3-205ENST00000471440 SSPOA2VEC9 5147 aa1.71□□□□□ -2.14
CFHR3-205ENST00000471440 KRTAP12-3P60328 96 aa1.7□□□□□ -2.14
CFHR3-205ENST00000471440 KRTAP5-7Q6L8G8 165 aa1.69□□□□□ -2.14
CFHR3-205ENST00000471440 FCGBPQ9Y6R7 5405 aaPredicted RBP1.69□□□□□ -2.14
CFHR3-205ENST00000471440 MACF1Q9UPN3 7388 aaKnown RBP1.68□□□□□ -2.14
CFHR3-205ENST00000471440 SYNE2Q8WXH0 6885 aaKnown RBP1.66□□□□□ -2.14
CFHR3-205ENST00000471440 KRTAP12-4P60329 112 aa1.66□□□□□ -2.14
CFHR3-205ENST00000471440 TNP1P09430 55 aa1.62□□□□□ -2.15
CFHR3-205ENST00000471440 KRTAP8-1Q8IUC2 63 aa1.61□□□□□ -2.15
CFHR3-205ENST00000471440 C10orf95Q9H7T3 257 aa1.61□□□□□ -2.15
CFHR3-205ENST00000471440 SPRR2FQ96RM1 72 aa1.58□□□□□ -2.16
CFHR3-205ENST00000471440 NEBP20929 6669 aa1.54□□□□□ -2.16
CFHR3-205ENST00000471440 KRTAP21-2Q3LI59 83 aa1.54□□□□□ -2.16
CFHR3-205ENST00000471440 SPRR2EP22531 72 aa1.53□□□□□ -2.16
CFHR3-205ENST00000471440 SPRR2BP35325 72 aa1.53□□□□□ -2.16
CFHR3-205ENST00000471440 SPRR2AP35326 72 aa1.53□□□□□ -2.16
CFHR3-205ENST00000471440 KRTAP19-7Q3SYF9 63 aa1.53□□□□□ -2.16
CFHR3-205ENST00000471440 KRTAP19-5Q3LI72 72 aa1.52□□□□□ -2.17
CFHR3-205ENST00000471440 MT1EP04732 61 aa1.52□□□□□ -2.17
CFHR3-205ENST00000471440 KMT2DO14686 5537 aa1.51□□□□□ -2.17
CFHR3-205ENST00000471440 KRTAP19-3Q7Z4W3 81 aa1.49□□□□□ -2.17
CFHR3-205ENST00000471440 MT1GP13640 62 aa1.48□□□□□ -2.17
CFHR3-205ENST00000471440 SPRR2DP22532 72 aa1.48□□□□□ -2.17
CFHR3-205ENST00000471440 KRTAP2-3P0C7H8 128 aa1.47□□□□□ -2.17
CFHR3-205ENST00000471440 KRTAP2-4Q9BYR9 128 aa1.47□□□□□ -2.17
CFHR3-205ENST00000471440 MT1LQ93083 61 aa1.47□□□□□ -2.17
CFHR3-205ENST00000471440 KRTAP20-1Q3LI63 56 aa1.46□□□□□ -2.18
CFHR3-205ENST00000471440 MUC12Q9UKN1 5478 aa1.45□□□□□ -2.18
CFHR3-205ENST00000471440 MT1MQ8N339 61 aa1.43□□□□□ -2.18
CFHR3-205ENST00000471440 MDN1Q9NU22 5596 aa1.43□□□□□ -2.18
CFHR3-205ENST00000471440 KRTAP2-1Q9BYU5 128 aa1.43□□□□□ -2.18
CFHR3-205ENST00000471440 DSTQ03001 7570 aaKnown RBP1.4□□□□□ -2.19
CFHR3-205ENST00000471440 AHNAK2Q8IVF2 5795 aa1.37□□□□□ -2.19
CFHR3-205ENST00000471440 MT4P47944 62 aa1.27□□□□□ -2.21
CFHR3-205ENST00000471440 MT1AP04731 61 aa1.26□□□□□ -2.21
CFHR3-205ENST00000471440 KRTAP20-2Q3LI61 65 aa1.23□□□□□ -2.21
CFHR3-205ENST00000471440 KRTAP6-1Q3LI64 71 aa1.23□□□□□ -2.21
CFHR3-205ENST00000471440 SYNE1Q8NF91 8797 aaKnown RBP1.19□□□□□ -2.22
CFHR3-205ENST00000471440 KRTAP6-2Q3LI66 62 aa1.16□□□□□ -2.22
CFHR3-205ENST00000471440 KRTAP5-10Q6L8G5 202 aa1.13□□□□□ -2.23
CFHR3-205ENST00000471440 MUC5ACP98088 5654 aa1.02□□□□□ -2.25
CFHR3-205ENST00000471440 PRM1P04553 51 aa0.79□□□□□ -2.28
CFHR3-205ENST00000471440 PHGR1C9JFL3 82 aa0.74□□□□□ -2.29
CFHR3-205ENST00000471440 MUC16Q8WXI7 14507 aa0.72□□□□□ -2.29
CFHR3-205ENST00000471440 KRTAP21-1Q3LI58 79 aa0.65□□□□□ -2.31
Retrieved 77 of 20,778 RNA–protein pairs in 9.5 ms