RNA–Protein interactions for RNA: ENST00000471396.1

TRIM59-204, Transcript of tripartite motif containing 59, humanhuman

TSL 4

Gene TRIM59, Length 548 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM59-204ENST00000471396 TMEM258P61165 79 aa3.01□□□□□ -1.93
TRIM59-204ENST00000471396 KRTAP20-1Q3LI63 56 aa3□□□□□ -1.93
TRIM59-204ENST00000471396 SPINT4Q6UDR6 99 aa3□□□□□ -1.93
TRIM59-204ENST00000471396 SMIM26A0A096LP01 95 aa2.99□□□□□ -1.93
TRIM59-204ENST00000471396 KRTAP12-1P59990 96 aa2.99□□□□□ -1.93
TRIM59-204ENST00000471396 PRR15LQ9BU68 103 aa2.98□□□□□ -1.93
TRIM59-204ENST00000471396 LCE3CQ5T5A8 94 aa2.97□□□□□ -1.93
TRIM59-204ENST00000471396 A8MU10 97 aa2.96□□□□□ -1.94
TRIM59-204ENST00000471396 LINC01558Q9Y6Z2 57 aa2.96□□□□□ -1.94
TRIM59-204ENST00000471396 KRTAP2-3P0C7H8 128 aa2.93□□□□□ -1.94
TRIM59-204ENST00000471396 KRTAP2-4Q9BYR9 128 aa2.93□□□□□ -1.94
TRIM59-204ENST00000471396 SPRR2DP22532 72 aa2.91□□□□□ -1.94
TRIM59-204ENST00000471396 UQCR11O14957 56 aa2.88□□□□□ -1.95
TRIM59-204ENST00000471396 KRTAP19-7Q3SYF9 63 aa2.88□□□□□ -1.95
TRIM59-204ENST00000471396 MT1EP04732 61 aa2.86□□□□□ -1.95
TRIM59-204ENST00000471396 C10orf95Q9H7T3 257 aa2.85□□□□□ -1.95
TRIM59-204ENST00000471396 TNP1P09430 55 aa2.84□□□□□ -1.95
TRIM59-204ENST00000471396 KRTAP2-1Q9BYU5 128 aa2.84□□□□□ -1.95
TRIM59-204ENST00000471396 V9GYY9 64 aa2.83□□□□□ -1.96
TRIM59-204ENST00000471396 MIR22HGQ0VDD5 57 aa2.82□□□□□ -1.96
TRIM59-204ENST00000471396 KRTAP19-5Q3LI72 72 aa2.82□□□□□ -1.96
TRIM59-204ENST00000471396 KRTAP19-3Q7Z4W3 81 aa2.82□□□□□ -1.96
TRIM59-204ENST00000471396 Q1T7F1 81 aa2.8□□□□□ -1.96
TRIM59-204ENST00000471396 LCE3AQ5TA76 89 aa2.8□□□□□ -1.96
TRIM59-204ENST00000471396 KRTAP9-6A8MVA2 160 aa2.79□□□□□ -1.96
TRIM59-204ENST00000471396 PSPHP1O15172 72 aa2.79□□□□□ -1.96
TRIM59-204ENST00000471396 KRTAP5-1Q6L8H4 278 aa2.79□□□□□ -1.96
TRIM59-204ENST00000471396 K7ERS5 55 aa2.76□□□□□ -1.97
TRIM59-204ENST00000471396 MT1GP13640 62 aa2.75□□□□□ -1.97
TRIM59-204ENST00000471396 DSTQ03001 7570 aaKnown RBP2.75□□□□□ -1.97
TRIM59-204ENST00000471396 PP632Q6XCG6 107 aa2.74□□□□□ -1.97
TRIM59-204ENST00000471396 MT1LQ93083 61 aa2.74□□□□□ -1.97
TRIM59-204ENST00000471396 RPS28P62857 69 aaKnown RBP2.72□□□□□ -1.97
TRIM59-204ENST00000471396 KRTAP25-1Q3LHN0 102 aa2.72□□□□□ -1.97
TRIM59-204ENST00000471396 A6NED7 52 aa2.71□□□□□ -1.98
TRIM59-204ENST00000471396 LCE3EQ5T5B0 92 aa2.71□□□□□ -1.98
TRIM59-204ENST00000471396 MT1MQ8N339 61 aa2.71□□□□□ -1.98
TRIM59-204ENST00000471396 KRTAP12-3P60328 96 aa2.69□□□□□ -1.98
TRIM59-204ENST00000471396 KRTAP4-4Q9BYR3 166 aa2.68□□□□□ -1.98
TRIM59-204ENST00000471396 KRTAP5-4Q6L8H1 288 aa2.67□□□□□ -1.98
TRIM59-204ENST00000471396 GPR98Q8WXG9 6306 aa2.63□□□□□ -1.99
TRIM59-204ENST00000471396 KRTAP4-3Q9BYR4 195 aa2.63□□□□□ -1.99
TRIM59-204ENST00000471396 CDC42SE1Q9NRR8 79 aa2.62□□□□□ -1.99
TRIM59-204ENST00000471396 ROMO1P60602 79 aa2.58□□□□□ -2
TRIM59-204ENST00000471396 HMCN1Q96RW7 5635 aa2.54□□□□□ -2
TRIM59-204ENST00000471396 MT4P47944 62 aa2.53□□□□□ -2
TRIM59-204ENST00000471396 KRTAP5-5Q701N2 237 aaPredicted RBP2.48□□□□□ -2.01
TRIM59-204ENST00000471396 OBSCNQ5VST9 7968 aa2.43□□□□□ -2.02
TRIM59-204ENST00000471396 AHNAK2Q8IVF2 5795 aa2.43□□□□□ -2.02
TRIM59-204ENST00000471396 SYNE1Q8NF91 8797 aaKnown RBP2.4□□□□□ -2.02
TRIM59-204ENST00000471396 BRK1Q8WUW1 75 aa2.4□□□□□ -2.03
TRIM59-204ENST00000471396 SPRR5A0A1B0GTR4 108 aa2.39□□□□□ -2.03
TRIM59-204ENST00000471396 KRTAP12-4P60329 112 aa2.39□□□□□ -2.03
TRIM59-204ENST00000471396 KRTAP20-2Q3LI61 65 aa2.39□□□□□ -2.03
TRIM59-204ENST00000471396 MT1AP04731 61 aa2.34□□□□□ -2.03
TRIM59-204ENST00000471396 KRTAP5-10Q6L8G5 202 aa2.34□□□□□ -2.03
TRIM59-204ENST00000471396 KRTAP6-1Q3LI64 71 aa2.3□□□□□ -2.04
TRIM59-204ENST00000471396 LCE3DQ9BYE3 92 aa2.27□□□□□ -2.05
TRIM59-204ENST00000471396 KRTAP5-2Q701N4 177 aa2.25□□□□□ -2.05
TRIM59-204ENST00000471396 PMAIP1Q13794 54 aa2.24□□□□□ -2.05
TRIM59-204ENST00000471396 KRTAP5-7Q6L8G8 165 aa2.24□□□□□ -2.05
TRIM59-204ENST00000471396 KRTAP6-2Q3LI66 62 aa2.19□□□□□ -2.06
TRIM59-204ENST00000471396 PRO0628Q9UI54 55 aa2.14□□□□□ -2.07
TRIM59-204ENST00000471396 KRTAP5-8O75690 187 aa2.09□□□□□ -2.07
TRIM59-204ENST00000471396 LCE1CQ5T751 118 aa2.05□□□□□ -2.08
TRIM59-204ENST00000471396 LCE1BQ5T7P3 118 aa2.05□□□□□ -2.08
TRIM59-204ENST00000471396 KTN1-AS1Q86SY8 53 aa2.04□□□□□ -2.08
TRIM59-204ENST00000471396 MUC5ACP98088 5654 aa2.02□□□□□ -2.09
TRIM59-204ENST00000471396 AHNAKQ09666 5890 aaKnown RBP2.01□□□□□ -2.09
TRIM59-204ENST00000471396 MUC5BQ9HC84 5762 aaPredicted RBP2□□□□□ -2.09
TRIM59-204ENST00000471396 LUZP6Q538Z0 58 aa2□□□□□ -2.09
TRIM59-204ENST00000471396 MUC19Q7Z5P9 8384 aa1.66□□□□□ -2.14
TRIM59-204ENST00000471396 KRTAP21-2Q3LI59 83 aa1.51□□□□□ -2.17
TRIM59-204ENST00000471396 PHGR1C9JFL3 82 aa1.4□□□□□ -2.19
TRIM59-204ENST00000471396 PRM1P04553 51 aa1.32□□□□□ -2.2
TRIM59-204ENST00000471396 INE1O15225 51 aa1.22□□□□□ -2.21
TRIM59-204ENST00000471396 KRTAP21-1Q3LI58 79 aa1.03□□□□□ -2.24
TRIM59-204ENST00000471396 MUC16Q8WXI7 14507 aa0.86□□□□□ -2.27
Retrieved 78 of 20,778 RNA–protein pairs in 79.7 ms