RNA–Protein interactions for RNA: ENST00000471247.5

CCNL1-214, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 3,671 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-214ENST00000471247 PRO2289Q9P1D8 64 aa1.39□□□□□ -2.19
CCNL1-214ENST00000471247 SPRR5A0A1B0GTR4 108 aa1.38□□□□□ -2.19
CCNL1-214ENST00000471247 MT1HL1P0DM35 61 aa1.38□□□□□ -2.19
CCNL1-214ENST00000471247 SYNE1Q8NF91 8797 aaKnown RBP1.38□□□□□ -2.19
CCNL1-214ENST00000471247 KRTAP12-1P59990 96 aa1.38□□□□□ -2.19
CCNL1-214ENST00000471247 RPS29P62273 56 aaKnown RBP1.38□□□□□ -2.19
CCNL1-214ENST00000471247 OBSCNQ5VST9 7968 aa1.37□□□□□ -2.19
CCNL1-214ENST00000471247 TNP1P09430 55 aa1.37□□□□□ -2.19
CCNL1-214ENST00000471247 LCE3EQ5T5B0 92 aa1.36□□□□□ -2.19
CCNL1-214ENST00000471247 KRTAP5-4Q6L8H1 288 aa1.36□□□□□ -2.19
CCNL1-214ENST00000471247 USH2AO75445 5202 aa1.32□□□□□ -2.2
CCNL1-214ENST00000471247 SSPOA2VEC9 5147 aa1.32□□□□□ -2.2
CCNL1-214ENST00000471247 INE1O15225 51 aa1.29□□□□□ -2.2
CCNL1-214ENST00000471247 KRTAP4-1Q9BYQ7 146 aa1.29□□□□□ -2.2
CCNL1-214ENST00000471247 KRTAP10-10P60014 251 aa1.28□□□□□ -2.21
CCNL1-214ENST00000471247 KRTAP5-2Q701N4 177 aa1.25□□□□□ -2.21
CCNL1-214ENST00000471247 MUC19Q7Z5P9 8384 aa1.24□□□□□ -2.21
CCNL1-214ENST00000471247 FSIP2Q5CZC0 6907 aa1.24□□□□□ -2.21
CCNL1-214ENST00000471247 NEBP20929 6669 aa1.23□□□□□ -2.21
CCNL1-214ENST00000471247 KRTAP5-5Q701N2 237 aaPredicted RBP1.23□□□□□ -2.21
CCNL1-214ENST00000471247 DSTQ03001 7570 aaKnown RBP1.21□□□□□ -2.22
CCNL1-214ENST00000471247 KRTAP5-1Q6L8H4 278 aa1.2□□□□□ -2.22
CCNL1-214ENST00000471247 KRTAP4-4Q9BYR3 166 aa1.2□□□□□ -2.22
CCNL1-214ENST00000471247 CRCT1Q9UGL9 99 aa1.19□□□□□ -2.22
CCNL1-214ENST00000471247 LCE3AQ5TA76 89 aa1.17□□□□□ -2.22
CCNL1-214ENST00000471247 KRTAP19-8Q3LI54 63 aa1.16□□□□□ -2.22
CCNL1-214ENST00000471247 SPRR2GQ9BYE4 73 aa1.15□□□□□ -2.23
CCNL1-214ENST00000471247 MT1HP80294 61 aa1.15□□□□□ -2.23
CCNL1-214ENST00000471247 LCE3DQ9BYE3 92 aa1.14□□□□□ -2.23
CCNL1-214ENST00000471247 KRTAP12-3P60328 96 aa1.12□□□□□ -2.23
CCNL1-214ENST00000471247 KRTAP5-8O75690 187 aa1.11□□□□□ -2.23
CCNL1-214ENST00000471247 MT1BP07438 61 aa1.11□□□□□ -2.23
CCNL1-214ENST00000471247 AHNAK2Q8IVF2 5795 aa1.1□□□□□ -2.23
CCNL1-214ENST00000471247 LCE1CQ5T751 118 aa1.1□□□□□ -2.23
CCNL1-214ENST00000471247 LCE1BQ5T7P3 118 aa1.1□□□□□ -2.23
CCNL1-214ENST00000471247 KMT2DO14686 5537 aa1.09□□□□□ -2.24
CCNL1-214ENST00000471247 MT2AP02795 61 aa1.09□□□□□ -2.24
CCNL1-214ENST00000471247 MT1FP04733 61 aa1.08□□□□□ -2.24
CCNL1-214ENST00000471247 MT1XP80297 61 aa1.07□□□□□ -2.24
CCNL1-214ENST00000471247 KRTAP12-4P60329 112 aa1.06□□□□□ -2.24
CCNL1-214ENST00000471247 MUC12Q9UKN1 5478 aa1.05□□□□□ -2.24
CCNL1-214ENST00000471247 FCGBPQ9Y6R7 5405 aaPredicted RBP1.05□□□□□ -2.24
CCNL1-214ENST00000471247 KRTAP8-1Q8IUC2 63 aa1.04□□□□□ -2.24
CCNL1-214ENST00000471247 SPRR2FQ96RM1 72 aa1.04□□□□□ -2.24
CCNL1-214ENST00000471247 KRTAP19-6Q3LI70 58 aa1.03□□□□□ -2.25
CCNL1-214ENST00000471247 KRTAP5-7Q6L8G8 165 aa1.02□□□□□ -2.25
CCNL1-214ENST00000471247 KRTAP6-3Q3LI67 103 aa1.02□□□□□ -2.25
CCNL1-214ENST00000471247 KRTAP4-3Q9BYR4 195 aa1.02□□□□□ -2.25
CCNL1-214ENST00000471247 SPRR2EP22531 72 aa1.01□□□□□ -2.25
CCNL1-214ENST00000471247 SPRR2BP35325 72 aa1.01□□□□□ -2.25
CCNL1-214ENST00000471247 SPRR2AP35326 72 aa1.01□□□□□ -2.25
CCNL1-214ENST00000471247 KRTAP19-7Q3SYF9 63 aa1□□□□□ -2.25
CCNL1-214ENST00000471247 SYNE2Q8WXH0 6885 aaKnown RBP0.99□□□□□ -2.25
CCNL1-214ENST00000471247 KRTAP19-5Q3LI72 72 aa0.97□□□□□ -2.25
CCNL1-214ENST00000471247 SPRR2DP22532 72 aa0.97□□□□□ -2.25
CCNL1-214ENST00000471247 KRTAP20-1Q3LI63 56 aa0.96□□□□□ -2.26
CCNL1-214ENST00000471247 MACF1Q9UPN3 7388 aaKnown RBP0.95□□□□□ -2.26
CCNL1-214ENST00000471247 PRM1P04553 51 aa0.95□□□□□ -2.26
CCNL1-214ENST00000471247 KRTAP2-3P0C7H8 128 aa0.94□□□□□ -2.26
CCNL1-214ENST00000471247 KRTAP2-4Q9BYR9 128 aa0.94□□□□□ -2.26
CCNL1-214ENST00000471247 KRTAP2-1Q9BYU5 128 aa0.94□□□□□ -2.26
CCNL1-214ENST00000471247 MDN1Q9NU22 5596 aa0.92□□□□□ -2.26
CCNL1-214ENST00000471247 MT1GP13640 62 aa0.92□□□□□ -2.26
CCNL1-214ENST00000471247 MT1EP04732 61 aa0.91□□□□□ -2.26
CCNL1-214ENST00000471247 MUC5ACP98088 5654 aa0.9□□□□□ -2.27
CCNL1-214ENST00000471247 MT4P47944 62 aa0.89□□□□□ -2.27
CCNL1-214ENST00000471247 MT1LQ93083 61 aa0.88□□□□□ -2.27
CCNL1-214ENST00000471247 KRTAP19-3Q7Z4W3 81 aa0.84□□□□□ -2.28
CCNL1-214ENST00000471247 MT1MQ8N339 61 aa0.81□□□□□ -2.28
CCNL1-214ENST00000471247 KRTAP5-10Q6L8G5 202 aa0.8□□□□□ -2.28
CCNL1-214ENST00000471247 KRTAP6-2Q3LI66 62 aa0.79□□□□□ -2.28
CCNL1-214ENST00000471247 MT1AP04731 61 aa0.79□□□□□ -2.28
CCNL1-214ENST00000471247 KRTAP21-2Q3LI59 83 aa0.75□□□□□ -2.29
CCNL1-214ENST00000471247 KRTAP6-1Q3LI64 71 aa0.73□□□□□ -2.29
CCNL1-214ENST00000471247 KRTAP20-2Q3LI61 65 aa0.68□□□□□ -2.3
CCNL1-214ENST00000471247 MUC16Q8WXI7 14507 aa0.56□□□□□ -2.32
CCNL1-214ENST00000471247 KRTAP21-1Q3LI58 79 aa0.56□□□□□ -2.32
CCNL1-214ENST00000471247 PHGR1C9JFL3 82 aa0.5□□□□□ -2.33
Retrieved 78 of 20,778 RNA–protein pairs in 11.7 ms