RNA–Protein interactions for RNA: ENST00000471226.5

ABCF3-208, Transcript of ATP binding cassette subfamily F member 3, human

TSL 5

Gene ABCF3, Length 650 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABCF3-208	ENST00000471226	LCE3B	Q5TA77	95 aa		5.53	□□□□□ -1.52
ABCF3-208	ENST00000471226		K7ERS5	55 aa		5.48	□□□□□ -1.53
ABCF3-208	ENST00000471226	MT1G	P13640	62 aa		5.45	□□□□□ -1.54
ABCF3-208	ENST00000471226		A6NED7	52 aa		5.43	□□□□□ -1.54
ABCF3-208	ENST00000471226	MT1L	Q93083	61 aa		5.42	□□□□□ -1.54
ABCF3-208	ENST00000471226	KRTAP25-1	Q3LHN0	102 aa		5.4	□□□□□ -1.54
ABCF3-208	ENST00000471226	PP632	Q6XCG6	107 aa		5.38	□□□□□ -1.55
ABCF3-208	ENST00000471226	MT1M	Q8N339	61 aa		5.35	□□□□□ -1.55
ABCF3-208	ENST00000471226	KRTAP12-3	P60328	96 aa		5.34	□□□□□ -1.55
ABCF3-208	ENST00000471226	DST	Q03001	7570 aa	Known RBP	5.27	□□□□□ -1.57
ABCF3-208	ENST00000471226	KRTAP23-1	A1A580	65 aa		5.24	□□□□□ -1.57
ABCF3-208	ENST00000471226	CDC42SE1	Q9NRR8	79 aa		5.23	□□□□□ -1.57
ABCF3-208	ENST00000471226	KRTAP4-3	Q9BYR4	195 aa		5.21	□□□□□ -1.58
ABCF3-208	ENST00000471226	ROMO1	P60602	79 aa		5.16	□□□□□ -1.58
ABCF3-208	ENST00000471226	KRTAP4-7	Q9BYR0	210 aa		5.16	□□□□□ -1.58
ABCF3-208	ENST00000471226	KRTAP4-9	Q9BYQ8	210 aa		5.09	□□□□□ -1.59
ABCF3-208	ENST00000471226	KRTAP19-4	Q3LI73	84 aa		5.08	□□□□□ -1.6
ABCF3-208	ENST00000471226	LCE4A	Q5TA78	99 aa		5.07	□□□□□ -1.6
ABCF3-208	ENST00000471226	KRTAP15-1	Q3LI76	137 aa		5.05	□□□□□ -1.6
ABCF3-208	ENST00000471226	KRTAP5-4	Q6L8H1	288 aa		5.02	□□□□□ -1.61
ABCF3-208	ENST00000471226	LCE1D	Q5T752	114 aa		5.01	□□□□□ -1.61
ABCF3-208	ENST00000471226	HMCN1	Q96RW7	5635 aa		4.98	□□□□□ -1.61
ABCF3-208	ENST00000471226	AHNAK2	Q8IVF2	5795 aa		4.96	□□□□□ -1.62
ABCF3-208	ENST00000471226	MT4	P47944	62 aa		4.95	□□□□□ -1.62
ABCF3-208	ENST00000471226	LCE3C	Q5T5A8	94 aa		4.94	□□□□□ -1.62
ABCF3-208	ENST00000471226	KRTAP5-10	Q6L8G5	202 aa		4.93	□□□□□ -1.62
ABCF3-208	ENST00000471226	KRTAP5-5	Q701N2	237 aa	Predicted RBP	4.92	□□□□□ -1.62
ABCF3-208	ENST00000471226	LOC100996750	A0A140TA64	210 aa		4.87	□□□□□ -1.63
ABCF3-208	ENST00000471226	KRTAP4-6	Q9BYQ5	205 aa		4.86	□□□□□ -1.63
ABCF3-208	ENST00000471226	KRTAP5-7	Q6L8G8	165 aa		4.84	□□□□□ -1.63
ABCF3-208	ENST00000471226	BRK1	Q8WUW1	75 aa		4.83	□□□□□ -1.64
ABCF3-208	ENST00000471226	SVIP	Q8NHG7	77 aa		4.79	□□□□□ -1.64
ABCF3-208	ENST00000471226	SPRR5	A0A1B0GTR4	108 aa		4.72	□□□□□ -1.65
ABCF3-208	ENST00000471226	KRTAP12-4	P60329	112 aa		4.71	□□□□□ -1.66
ABCF3-208	ENST00000471226	KRTAP20-2	Q3LI61	65 aa		4.71	□□□□□ -1.66
ABCF3-208	ENST00000471226	KRTAP9-6	A8MVA2	160 aa		4.67	□□□□□ -1.66
ABCF3-208	ENST00000471226	SYNE1	Q8NF91	8797 aa	Known RBP	4.64	□□□□□ -1.67
ABCF3-208	ENST00000471226	KRTAP5-3	Q6L8H2	238 aa		4.62	□□□□□ -1.67
ABCF3-208	ENST00000471226	MT1A	P04731	61 aa		4.61	□□□□□ -1.67
ABCF3-208	ENST00000471226	KRTAP6-1	Q3LI64	71 aa		4.58	□□□□□ -1.68
ABCF3-208	ENST00000471226	PMAIP1	Q13794	54 aa		4.56	□□□□□ -1.68
ABCF3-208	ENST00000471226	KRTAP9-4	Q9BYQ2	154 aa		4.45	□□□□□ -1.7
ABCF3-208	ENST00000471226	KRTAP5-2	Q701N4	177 aa		4.44	□□□□□ -1.7
ABCF3-208	ENST00000471226	PRAC1	Q96KF2	57 aa		4.36	□□□□□ -1.71
ABCF3-208	ENST00000471226	AHNAK	Q09666	5890 aa	Known RBP	4.35	□□□□□ -1.71
ABCF3-208	ENST00000471226	PRO0628	Q9UI54	55 aa		4.35	□□□□□ -1.71
ABCF3-208	ENST00000471226	KRTAP6-2	Q3LI66	62 aa		4.33	□□□□□ -1.72
ABCF3-208	ENST00000471226	KRTAP4-11	Q9BYQ6	195 aa		4.25	□□□□□ -1.73
ABCF3-208	ENST00000471226	MUC5AC	P98088	5654 aa		4.24	□□□□□ -1.73
ABCF3-208	ENST00000471226	MUC5B	Q9HC84	5762 aa	Predicted RBP	4.23	□□□□□ -1.73
ABCF3-208	ENST00000471226	MT3	P25713	68 aa		4.21	□□□□□ -1.74
ABCF3-208	ENST00000471226	KTN1-AS1	Q86SY8	53 aa		4.13	□□□□□ -1.75
ABCF3-208	ENST00000471226	KRTAP5-8	O75690	187 aa		4.12	□□□□□ -1.75
ABCF3-208	ENST00000471226	OBSCN	Q5VST9	7968 aa		4	□□□□□ -1.77
ABCF3-208	ENST00000471226	KRTAP5-1	Q6L8H4	278 aa		3.94	□□□□□ -1.78
ABCF3-208	ENST00000471226	KRTAP9-9	Q9BYP9	154 aa		3.85	□□□□□ -1.79
ABCF3-208	ENST00000471226	LCE1E	Q5T753	118 aa		3.84	□□□□□ -1.79
ABCF3-208	ENST00000471226	LUZP6	Q538Z0	58 aa		3.64	□□□□□ -1.83
ABCF3-208	ENST00000471226	KRTAP4-2	Q9BYR5	136 aa		3.61	□□□□□ -1.83
ABCF3-208	ENST00000471226	LCE3D	Q9BYE3	92 aa		3.59	□□□□□ -1.83
ABCF3-208	ENST00000471226	LCE1C	Q5T751	118 aa		3.56	□□□□□ -1.84
ABCF3-208	ENST00000471226	LCE1B	Q5T7P3	118 aa		3.56	□□□□□ -1.84
ABCF3-208	ENST00000471226	LCE3E	Q5T5B0	92 aa		3.41	□□□□□ -1.86
ABCF3-208	ENST00000471226		H3BS24	57 aa		3.36	□□□□□ -1.87
ABCF3-208	ENST00000471226	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	3.28	□□□□□ -1.88
ABCF3-208	ENST00000471226	KRTAP5-11	Q6L8G4	156 aa		3.21	□□□□□ -1.9
ABCF3-208	ENST00000471226	KRTAP4-12	Q9BQ66	201 aa		3.18	□□□□□ -1.9
ABCF3-208	ENST00000471226	LCE1F	Q5T754	118 aa		3.08	□□□□□ -1.92
ABCF3-208	ENST00000471226	NDUFAF8	A1L188	74 aa		3.05	□□□□□ -1.92
ABCF3-208	ENST00000471226	KRTAP21-2	Q3LI59	83 aa		3.03	□□□□□ -1.92
ABCF3-208	ENST00000471226		A0A0A0MQY5	61 aa		2.9	□□□□□ -1.95
ABCF3-208	ENST00000471226	PHGR1	C9JFL3	82 aa		2.88	□□□□□ -1.95
ABCF3-208	ENST00000471226	KRTAP4-4	Q9BYR3	166 aa		2.71	□□□□□ -1.98
ABCF3-208	ENST00000471226	PRM1	P04553	51 aa		2.64	□□□□□ -1.99
ABCF3-208	ENST00000471226	INE1	O15225	51 aa		2.49	□□□□□ -2.01
ABCF3-208	ENST00000471226	MUC19	Q7Z5P9	8384 aa		2.46	□□□□□ -2.02
ABCF3-208	ENST00000471226	KRTAP21-1	Q3LI58	79 aa		2.2	□□□□□ -2.06
ABCF3-208	ENST00000471226	MUC16	Q8WXI7	14507 aa		1.77	□□□□□ -2.13

Retrieved 78 of 20,778 RNA–protein pairs in 62.2 ms