RNA–Protein interactions for RNA: ENST00000470563.5

RBM39-227, Transcript of RNA binding motif protein 39, humanhuman

TSL 3

Gene RBM39, Length 384 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-227ENST00000470563 TNP1P09430 55 aa2.06□□□□□ -2.08
RBM39-227ENST00000470563 RYR2Q92736 4967 aa2.04□□□□□ -2.08
RBM39-227ENST00000470563 UBR4Q5T4S7 5183 aa2.04□□□□□ -2.08
RBM39-227ENST00000470563 KRTAP5-7Q6L8G8 165 aa2.02□□□□□ -2.09
RBM39-227ENST00000470563 HERC2O95714 4834 aa2.02□□□□□ -2.09
RBM39-227ENST00000470563 KRTAP5-8O75690 187 aa2.01□□□□□ -2.09
RBM39-227ENST00000470563 INE1O15225 51 aa1.99□□□□□ -2.09
RBM39-227ENST00000470563 MYCBP2O75592 4640 aa1.98□□□□□ -2.09
RBM39-227ENST00000470563 KRTAP19-2Q3LHN2 52 aa1.96□□□□□ -2.1
RBM39-227ENST00000470563 KIAA1109Q2LD37 5005 aa1.95□□□□□ -2.1
RBM39-227ENST00000470563 SPRR2GQ9BYE4 73 aa1.92□□□□□ -2.1
RBM39-227ENST00000470563 FLGP20930 4061 aaPredicted RBP1.9□□□□□ -2.1
RBM39-227ENST00000470563 KRTAP4-1Q9BYQ7 146 aa1.9□□□□□ -2.11
RBM39-227ENST00000470563 HERC1Q15751 4861 aa1.9□□□□□ -2.11
RBM39-227ENST00000470563 MUC19Q7Z5P9 8384 aa1.9□□□□□ -2.11
RBM39-227ENST00000470563 ABCA13Q86UQ4 5058 aa1.89□□□□□ -2.11
RBM39-227ENST00000470563 KRTAP8-1Q8IUC2 63 aa1.89□□□□□ -2.11
RBM39-227ENST00000470563 MUC17Q685J3 4493 aa1.88□□□□□ -2.11
RBM39-227ENST00000470563 LRP2P98164 4655 aa1.87□□□□□ -2.11
RBM39-227ENST00000470563 KRTAP19-8Q3LI54 63 aa1.83□□□□□ -2.12
RBM39-227ENST00000470563 LPAP08519 4548 aa1.81□□□□□ -2.12
RBM39-227ENST00000470563 MUC2Q02817 5179 aa1.78□□□□□ -2.13
RBM39-227ENST00000470563 M0R2T5 61 aa1.76□□□□□ -2.13
RBM39-227ENST00000470563 FAT4Q6V0I7 4981 aa1.74□□□□□ -2.13
RBM39-227ENST00000470563 MT2AP02795 61 aa1.74□□□□□ -2.13
RBM39-227ENST00000470563 MT1HP80294 61 aa1.74□□□□□ -2.13
RBM39-227ENST00000470563 MT1FP04733 61 aa1.73□□□□□ -2.13
RBM39-227ENST00000470563 MT1XP80297 61 aa1.73□□□□□ -2.13
RBM39-227ENST00000470563 MT1BP07438 61 aa1.72□□□□□ -2.13
RBM39-227ENST00000470563 HMCN2Q8NDA2 5059 aa1.72□□□□□ -2.13
RBM39-227ENST00000470563 RNF213Q63HN8 5207 aa1.69□□□□□ -2.14
RBM39-227ENST00000470563 KRTAP21-2Q3LI59 83 aa1.67□□□□□ -2.14
RBM39-227ENST00000470563 KRTAP2-3P0C7H8 128 aa1.65□□□□□ -2.15
RBM39-227ENST00000470563 KRTAP2-4Q9BYR9 128 aa1.65□□□□□ -2.15
RBM39-227ENST00000470563 KRTAP2-1Q9BYU5 128 aa1.65□□□□□ -2.15
RBM39-227ENST00000470563 KRTAP19-5Q3LI72 72 aa1.62□□□□□ -2.15
RBM39-227ENST00000470563 FSIP2Q5CZC0 6907 aa1.59□□□□□ -2.16
RBM39-227ENST00000470563 KRTAP19-7Q3SYF9 63 aa1.55□□□□□ -2.16
RBM39-227ENST00000470563 MT1EP04732 61 aa1.54□□□□□ -2.16
RBM39-227ENST00000470563 CRCT1Q9UGL9 99 aa1.54□□□□□ -2.16
RBM39-227ENST00000470563 MT1LQ93083 61 aa1.53□□□□□ -2.16
RBM39-227ENST00000470563 SSPOA2VEC9 5147 aa1.48□□□□□ -2.17
RBM39-227ENST00000470563 MT1GP13640 62 aa1.45□□□□□ -2.18
RBM39-227ENST00000470563 NEBP20929 6669 aa1.44□□□□□ -2.18
RBM39-227ENST00000470563 SYNE2Q8WXH0 6885 aaKnown RBP1.43□□□□□ -2.18
RBM39-227ENST00000470563 MT1AP04731 61 aa1.43□□□□□ -2.18
RBM39-227ENST00000470563 GPR98Q8WXG9 6306 aa1.43□□□□□ -2.18
RBM39-227ENST00000470563 KRTAP19-6Q3LI70 58 aa1.42□□□□□ -2.18
RBM39-227ENST00000470563 KRTAP19-3Q7Z4W3 81 aa1.41□□□□□ -2.18
RBM39-227ENST00000470563 MT1MQ8N339 61 aa1.4□□□□□ -2.19
RBM39-227ENST00000470563 MACF1Q9UPN3 7388 aaKnown RBP1.4□□□□□ -2.19
RBM39-227ENST00000470563 USH2AO75445 5202 aa1.39□□□□□ -2.19
RBM39-227ENST00000470563 MUC12Q9UKN1 5478 aa1.33□□□□□ -2.2
RBM39-227ENST00000470563 KRTAP20-1Q3LI63 56 aa1.33□□□□□ -2.2
RBM39-227ENST00000470563 FCGBPQ9Y6R7 5405 aaPredicted RBP1.32□□□□□ -2.2
RBM39-227ENST00000470563 SPRR2FQ96RM1 72 aa1.29□□□□□ -2.2
RBM39-227ENST00000470563 PRM1P04553 51 aa1.27□□□□□ -2.21
RBM39-227ENST00000470563 KMT2DO14686 5537 aa1.26□□□□□ -2.21
RBM39-227ENST00000470563 KRTAP6-1Q3LI64 71 aa1.25□□□□□ -2.21
RBM39-227ENST00000470563 SPRR2AP35326 72 aa1.24□□□□□ -2.21
RBM39-227ENST00000470563 SYNE1Q8NF91 8797 aaKnown RBP1.21□□□□□ -2.22
RBM39-227ENST00000470563 KRTAP6-2Q3LI66 62 aa1.2□□□□□ -2.22
RBM39-227ENST00000470563 MDN1Q9NU22 5596 aa1.2□□□□□ -2.22
RBM39-227ENST00000470563 AHNAK2Q8IVF2 5795 aa1.19□□□□□ -2.22
RBM39-227ENST00000470563 SPRR2BP35325 72 aa1.19□□□□□ -2.22
RBM39-227ENST00000470563 SPRR2EP22531 72 aa1.18□□□□□ -2.22
RBM39-227ENST00000470563 AHNAKQ09666 5890 aaKnown RBP1.12□□□□□ -2.23
RBM39-227ENST00000470563 SPRR2DP22532 72 aa1.11□□□□□ -2.23
RBM39-227ENST00000470563 HMCN1Q96RW7 5635 aa1.09□□□□□ -2.23
RBM39-227ENST00000470563 MUC5BQ9HC84 5762 aaPredicted RBP1.08□□□□□ -2.24
RBM39-227ENST00000470563 DSTQ03001 7570 aaKnown RBP1.08□□□□□ -2.24
RBM39-227ENST00000470563 KRTAP5-10Q6L8G5 202 aa1.05□□□□□ -2.24
RBM39-227ENST00000470563 MUC5ACP98088 5654 aa1□□□□□ -2.25
RBM39-227ENST00000470563 MUC16Q8WXI7 14507 aa0.98□□□□□ -2.25
RBM39-227ENST00000470563 KRTAP20-2Q3LI61 65 aa0.96□□□□□ -2.26
RBM39-227ENST00000470563 MT4P47944 62 aa0.87□□□□□ -2.27
RBM39-227ENST00000470563 KRTAP21-1Q3LI58 79 aa0.87□□□□□ -2.27
RBM39-227ENST00000470563 PHGR1C9JFL3 82 aa0.65□□□□□ -2.31
Retrieved 78 of 20,778 RNA–protein pairs in 8.1 ms