RNA–Protein interactions for RNA: ENST00000470121.5

CCNL1-212, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 1,889 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-212ENST00000470121 KRTAP4-7Q9BYR0 210 aa4.95□□□□□ -1.62
CCNL1-212ENST00000470121 MT1LQ93083 61 aa4.92□□□□□ -1.62
CCNL1-212ENST00000470121 KRTAP19-4Q3LI73 84 aa4.91□□□□□ -1.62
CCNL1-212ENST00000470121 CRCT1Q9UGL9 99 aa4.9□□□□□ -1.63
CCNL1-212ENST00000470121 LCE3BQ5TA77 95 aa4.86□□□□□ -1.63
CCNL1-212ENST00000470121 KRTAP4-12Q9BQ66 201 aa4.85□□□□□ -1.63
CCNL1-212ENST00000470121 KRTAP9-9Q9BYP9 154 aa4.79□□□□□ -1.64
CCNL1-212ENST00000470121 KRTAP9-4Q9BYQ2 154 aa4.79□□□□□ -1.64
CCNL1-212ENST00000470121 KRTAP9-6A8MVA2 160 aa4.77□□□□□ -1.65
CCNL1-212ENST00000470121 KRTAP19-3Q7Z4W3 81 aa4.72□□□□□ -1.65
CCNL1-212ENST00000470121 KRTAP4-2Q9BYR5 136 aa4.71□□□□□ -1.66
CCNL1-212ENST00000470121 A0A0A0MQY5 61 aa4.69□□□□□ -1.66
CCNL1-212ENST00000470121 MT1GP13640 62 aa4.69□□□□□ -1.66
CCNL1-212ENST00000470121 MACF1Q9UPN3 7388 aaKnown RBP4.67□□□□□ -1.66
CCNL1-212ENST00000470121 MT1MQ8N339 61 aa4.66□□□□□ -1.66
CCNL1-212ENST00000470121 SPRR2FQ96RM1 72 aa4.66□□□□□ -1.66
CCNL1-212ENST00000470121 MUC12Q9UKN1 5478 aa4.65□□□□□ -1.67
CCNL1-212ENST00000470121 KRTAP5-9P26371 169 aa4.62□□□□□ -1.67
CCNL1-212ENST00000470121 LCE5AQ5TCM9 118 aa4.62□□□□□ -1.67
CCNL1-212ENST00000470121 KRTAP4-3Q9BYR4 195 aa4.62□□□□□ -1.67
CCNL1-212ENST00000470121 KRTAP4-9Q9BYQ8 210 aa4.58□□□□□ -1.68
CCNL1-212ENST00000470121 LCE1DQ5T752 114 aa4.56□□□□□ -1.68
CCNL1-212ENST00000470121 KRTAP2-3P0C7H8 128 aa4.51□□□□□ -1.69
CCNL1-212ENST00000470121 KRTAP2-4Q9BYR9 128 aa4.51□□□□□ -1.69
CCNL1-212ENST00000470121 KRTAP2-1Q9BYU5 128 aa4.51□□□□□ -1.69
CCNL1-212ENST00000470121 SYNE2Q8WXH0 6885 aaKnown RBP4.49□□□□□ -1.69
CCNL1-212ENST00000470121 KRTAP6-3Q3LI67 103 aa4.49□□□□□ -1.69
CCNL1-212ENST00000470121 LCE1AQ5T7P2 110 aa4.47□□□□□ -1.69
CCNL1-212ENST00000470121 LCE4AQ5TA78 99 aa4.44□□□□□ -1.7
CCNL1-212ENST00000470121 SPRR2EP22531 72 aa4.39□□□□□ -1.71
CCNL1-212ENST00000470121 SPRR2BP35325 72 aa4.39□□□□□ -1.71
CCNL1-212ENST00000470121 SPRR2AP35326 72 aa4.39□□□□□ -1.71
CCNL1-212ENST00000470121 MDN1Q9NU22 5596 aa4.37□□□□□ -1.71
CCNL1-212ENST00000470121 KRTAP9-7A8MTY7 169 aa4.36□□□□□ -1.71
CCNL1-212ENST00000470121 DSTQ03001 7570 aaKnown RBP4.31□□□□□ -1.72
CCNL1-212ENST00000470121 INE1O15225 51 aa4.3□□□□□ -1.72
CCNL1-212ENST00000470121 SPRR2DP22532 72 aa4.23□□□□□ -1.73
CCNL1-212ENST00000470121 KRTAP5-5Q701N2 237 aaPredicted RBP4.21□□□□□ -1.74
CCNL1-212ENST00000470121 KRTAP4-11Q9BYQ6 195 aa4.21□□□□□ -1.74
CCNL1-212ENST00000470121 MT1AP04731 61 aa4.15□□□□□ -1.74
CCNL1-212ENST00000470121 KRTAP6-1Q3LI64 71 aa4.15□□□□□ -1.75
CCNL1-212ENST00000470121 NEBP20929 6669 aa4.04□□□□□ -1.76
CCNL1-212ENST00000470121 SYNE1Q8NF91 8797 aaKnown RBP3.98□□□□□ -1.77
CCNL1-212ENST00000470121 KRTAP5-4Q6L8H1 288 aa3.89□□□□□ -1.79
CCNL1-212ENST00000470121 KRTAP12-4P60329 112 aa3.84□□□□□ -1.79
CCNL1-212ENST00000470121 KRTAP2-2Q9BYT5 123 aa3.83□□□□□ -1.8
CCNL1-212ENST00000470121 KRTAP20-1Q3LI63 56 aa3.77□□□□□ -1.81
CCNL1-212ENST00000470121 KRTAP6-2Q3LI66 62 aa3.76□□□□□ -1.81
CCNL1-212ENST00000470121 LCE3DQ9BYE3 92 aa3.76□□□□□ -1.81
CCNL1-212ENST00000470121 MT3P25713 68 aa3.74□□□□□ -1.81
CCNL1-212ENST00000470121 LCE3EQ5T5B0 92 aa3.69□□□□□ -1.82
CCNL1-212ENST00000470121 MT4P47944 62 aa3.64□□□□□ -1.83
CCNL1-212ENST00000470121 KRTAP20-2Q3LI61 65 aa3.62□□□□□ -1.83
CCNL1-212ENST00000470121 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.58□□□□□ -1.84
CCNL1-212ENST00000470121 KRTAP5-2Q701N4 177 aa3.58□□□□□ -1.84
CCNL1-212ENST00000470121 HMCN1Q96RW7 5635 aa3.48□□□□□ -1.85
CCNL1-212ENST00000470121 GPR98Q8WXG9 6306 aa3.46□□□□□ -1.85
CCNL1-212ENST00000470121 OBSCNQ5VST9 7968 aa3.41□□□□□ -1.86
CCNL1-212ENST00000470121 PRM1P04553 51 aa3.34□□□□□ -1.87
CCNL1-212ENST00000470121 LCE1EQ5T753 118 aa3.2□□□□□ -1.9
CCNL1-212ENST00000470121 KRTAP5-1Q6L8H4 278 aa3.07□□□□□ -1.92
CCNL1-212ENST00000470121 MUC5ACP98088 5654 aa3.05□□□□□ -1.92
CCNL1-212ENST00000470121 KRTAP5-10Q6L8G5 202 aa3.04□□□□□ -1.92
CCNL1-212ENST00000470121 AHNAK2Q8IVF2 5795 aa3.03□□□□□ -1.92
CCNL1-212ENST00000470121 LCE1BQ5T7P3 118 aa3□□□□□ -1.93
CCNL1-212ENST00000470121 LCE1CQ5T751 118 aa2.99□□□□□ -1.93
CCNL1-212ENST00000470121 KRTAP5-8O75690 187 aa2.99□□□□□ -1.93
CCNL1-212ENST00000470121 KRTAP5-7Q6L8G8 165 aa2.95□□□□□ -1.94
CCNL1-212ENST00000470121 KRTAP4-4Q9BYR3 166 aa2.88□□□□□ -1.95
CCNL1-212ENST00000470121 KRTAP5-11Q6L8G4 156 aa2.84□□□□□ -1.96
CCNL1-212ENST00000470121 AHNAKQ09666 5890 aaKnown RBP2.74□□□□□ -1.97
CCNL1-212ENST00000470121 KRTAP21-2Q3LI59 83 aa2.72□□□□□ -1.97
CCNL1-212ENST00000470121 MUC5BQ9HC84 5762 aaPredicted RBP2.63□□□□□ -1.99
CCNL1-212ENST00000470121 LCE1FQ5T754 118 aa2.57□□□□□ -2
CCNL1-212ENST00000470121 PHGR1C9JFL3 82 aa2.25□□□□□ -2.05
CCNL1-212ENST00000470121 KRTAP21-1Q3LI58 79 aa2.11□□□□□ -2.07
CCNL1-212ENST00000470121 MUC19Q7Z5P9 8384 aa2□□□□□ -2.09
CCNL1-212ENST00000470121 MUC16Q8WXI7 14507 aa1.52□□□□□ -2.17
Retrieved 78 of 20,778 RNA–protein pairs in 10.4 ms