RNA–Protein interactions for RNA: ENST00000469358.5

VARS2-205, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 5

Gene VARS2, Length 3,429 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-205ENST00000469358 FCGBPQ9Y6R7 5405 aaPredicted RBP4.12□□□□□ -1.75
VARS2-205ENST00000469358 MT1EP04732 61 aa4.11□□□□□ -1.75
VARS2-205ENST00000469358 KRTAP4-3Q9BYR4 195 aa4.09□□□□□ -1.75
VARS2-205ENST00000469358 DSTQ03001 7570 aaKnown RBP4.09□□□□□ -1.75
VARS2-205ENST00000469358 LOC100996750A0A140TA64 210 aa4.09□□□□□ -1.76
VARS2-205ENST00000469358 CRCT1Q9UGL9 99 aa4.01□□□□□ -1.77
VARS2-205ENST00000469358 MT1GP13640 62 aa3.98□□□□□ -1.77
VARS2-205ENST00000469358 KRTAP19-6Q3LI70 58 aa3.95□□□□□ -1.78
VARS2-205ENST00000469358 SYNE1Q8NF91 8797 aaKnown RBP3.86□□□□□ -1.79
VARS2-205ENST00000469358 MT1MQ8N339 61 aa3.85□□□□□ -1.79
VARS2-205ENST00000469358 KRTAP19-4Q3LI73 84 aa3.81□□□□□ -1.8
VARS2-205ENST00000469358 KRTAP19-3Q7Z4W3 81 aa3.8□□□□□ -1.8
VARS2-205ENST00000469358 KRTAP12-4P60329 112 aa3.77□□□□□ -1.81
VARS2-205ENST00000469358 MACF1Q9UPN3 7388 aaKnown RBP3.76□□□□□ -1.81
VARS2-205ENST00000469358 KRTAP4-9Q9BYQ8 210 aa3.75□□□□□ -1.81
VARS2-205ENST00000469358 SYNE2Q8WXH0 6885 aaKnown RBP3.74□□□□□ -1.81
VARS2-205ENST00000469358 LCE3BQ5TA77 95 aa3.73□□□□□ -1.81
VARS2-205ENST00000469358 OBSCNQ5VST9 7968 aa3.72□□□□□ -1.81
VARS2-205ENST00000469358 SPRR2FQ96RM1 72 aa3.72□□□□□ -1.81
VARS2-205ENST00000469358 KRTAP9-2Q9BYQ4 174 aa3.71□□□□□ -1.82
VARS2-205ENST00000469358 MDN1Q9NU22 5596 aa3.68□□□□□ -1.82
VARS2-205ENST00000469358 LCE5AQ5TCM9 118 aa3.65□□□□□ -1.82
VARS2-205ENST00000469358 KRTAP6-1Q3LI64 71 aa3.57□□□□□ -1.84
VARS2-205ENST00000469358 KRTAP4-6Q9BYQ5 205 aa3.47□□□□□ -1.85
VARS2-205ENST00000469358 KRTAP9-7A8MTY7 169 aa3.46□□□□□ -1.86
VARS2-205ENST00000469358 LCE3DQ9BYE3 92 aa3.43□□□□□ -1.86
VARS2-205ENST00000469358 MT1AP04731 61 aa3.41□□□□□ -1.86
VARS2-205ENST00000469358 KRTAP5-9P26371 169 aa3.41□□□□□ -1.86
VARS2-205ENST00000469358 LCE1AQ5T7P2 110 aa3.4□□□□□ -1.87
VARS2-205ENST00000469358 KRTAP5-5Q701N2 237 aaPredicted RBP3.38□□□□□ -1.87
VARS2-205ENST00000469358 LCE3EQ5T5B0 92 aa3.38□□□□□ -1.87
VARS2-205ENST00000469358 PRM1P04553 51 aa3.37□□□□□ -1.87
VARS2-205ENST00000469358 SPRR2EP22531 72 aa3.36□□□□□ -1.87
VARS2-205ENST00000469358 SPRR2BP35325 72 aa3.36□□□□□ -1.87
VARS2-205ENST00000469358 SPRR2AP35326 72 aa3.36□□□□□ -1.87
VARS2-205ENST00000469358 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.33□□□□□ -1.88
VARS2-205ENST00000469358 KRTAP9-6A0A140TA67 174 aa3.31□□□□□ -1.88
VARS2-205ENST00000469358 KRTAP6-3Q3LI67 103 aa3.24□□□□□ -1.89
VARS2-205ENST00000469358 KRTAP6-2Q3LI66 62 aa3.23□□□□□ -1.89
VARS2-205ENST00000469358 SPRR2DP22532 72 aa3.22□□□□□ -1.89
VARS2-205ENST00000469358 KRTAP9-4Q9BYQ2 154 aa3.21□□□□□ -1.9
VARS2-205ENST00000469358 LCE4AQ5TA78 99 aa3.19□□□□□ -1.9
VARS2-205ENST00000469358 NEBP20929 6669 aa3.13□□□□□ -1.91
VARS2-205ENST00000469358 KRTAP9-9Q9BYP9 154 aa3.12□□□□□ -1.91
VARS2-205ENST00000469358 KRTAP4-12Q9BQ66 201 aa3.06□□□□□ -1.92
VARS2-205ENST00000469358 MT3P25713 68 aa3.05□□□□□ -1.92
VARS2-205ENST00000469358 LCE1DQ5T752 114 aa2.93□□□□□ -1.94
VARS2-205ENST00000469358 KRTAP2-2Q9BYT5 123 aa2.91□□□□□ -1.94
VARS2-205ENST00000469358 MT4P47944 62 aa2.89□□□□□ -1.95
VARS2-205ENST00000469358 KRTAP5-4Q6L8H1 288 aa2.89□□□□□ -1.95
VARS2-205ENST00000469358 GPR98Q8WXG9 6306 aa2.85□□□□□ -1.95
VARS2-205ENST00000469358 MUC19Q7Z5P9 8384 aa2.83□□□□□ -1.96
VARS2-205ENST00000469358 HMCN1Q96RW7 5635 aa2.79□□□□□ -1.96
VARS2-205ENST00000469358 KRTAP4-2Q9BYR5 136 aa2.76□□□□□ -1.97
VARS2-205ENST00000469358 MUC5ACP98088 5654 aa2.75□□□□□ -1.97
VARS2-205ENST00000469358 KRTAP20-2Q3LI61 65 aa2.74□□□□□ -1.97
VARS2-205ENST00000469358 KRTAP4-11Q9BYQ6 195 aa2.72□□□□□ -1.97
VARS2-205ENST00000469358 LCE1EQ5T753 118 aa2.72□□□□□ -1.97
VARS2-205ENST00000469358 KRTAP20-1Q3LI63 56 aa2.7□□□□□ -1.98
VARS2-205ENST00000469358 KRTAP5-2Q701N4 177 aa2.66□□□□□ -1.98
VARS2-205ENST00000469358 LCE1BQ5T7P3 118 aa2.61□□□□□ -1.99
VARS2-205ENST00000469358 KRTAP5-3Q6L8H2 238 aa2.61□□□□□ -1.99
VARS2-205ENST00000469358 MUC5BQ9HC84 5762 aaPredicted RBP2.55□□□□□ -2
VARS2-205ENST00000469358 KRTAP5-10Q6L8G5 202 aa2.49□□□□□ -2.01
VARS2-205ENST00000469358 LCE1FQ5T754 118 aa2.42□□□□□ -2.02
VARS2-205ENST00000469358 KRTAP5-1Q6L8H4 278 aa2.38□□□□□ -2.03
VARS2-205ENST00000469358 AHNAK2Q8IVF2 5795 aa2.31□□□□□ -2.04
VARS2-205ENST00000469358 AHNAKQ09666 5890 aaKnown RBP2.29□□□□□ -2.04
VARS2-205ENST00000469358 LCE1CQ5T751 118 aa2.29□□□□□ -2.04
VARS2-205ENST00000469358 KRTAP21-2Q3LI59 83 aa2.26□□□□□ -2.05
VARS2-205ENST00000469358 KRTAP4-4Q9BYR3 166 aa2.25□□□□□ -2.05
VARS2-205ENST00000469358 KRTAP5-8O75690 187 aa2.23□□□□□ -2.05
VARS2-205ENST00000469358 KRTAP5-7Q6L8G8 165 aa2.19□□□□□ -2.06
VARS2-205ENST00000469358 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.11□□□□□ -2.07
VARS2-205ENST00000469358 KRTAP21-1Q3LI58 79 aa2.03□□□□□ -2.08
VARS2-205ENST00000469358 KRTAP5-11Q6L8G4 156 aa1.94□□□□□ -2.1
VARS2-205ENST00000469358 PHGR1C9JFL3 82 aa1.72□□□□□ -2.13
VARS2-205ENST00000469358 MUC16Q8WXI7 14507 aa1.18□□□□□ -2.22
Retrieved 78 of 20,778 RNA–protein pairs in 152.7 ms