RNA–Protein interactions for RNA: ENST00000469232.5

NPHP3-204, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 1,616 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-204ENST00000469232 FSIP2Q5CZC0 6907 aa3.28□□□□□ -1.88
NPHP3-204ENST00000469232 PRO0628Q9UI54 55 aa3.28□□□□□ -1.88
NPHP3-204ENST00000469232 KRTAP10-12P60413 245 aa3.27□□□□□ -1.89
NPHP3-204ENST00000469232 ROMO1P60602 79 aa3.24□□□□□ -1.89
NPHP3-204ENST00000469232 KRTAP25-1Q3LHN0 102 aa3.22□□□□□ -1.89
NPHP3-204ENST00000469232 TNP1P09430 55 aa3.21□□□□□ -1.9
NPHP3-204ENST00000469232 LCE1FQ5T754 118 aa3.19□□□□□ -1.9
NPHP3-204ENST00000469232 PMAIP1Q13794 54 aa3.19□□□□□ -1.9
NPHP3-204ENST00000469232 LCE3AQ5TA76 89 aa3.11□□□□□ -1.91
NPHP3-204ENST00000469232 KRTAP8-1Q8IUC2 63 aa3.11□□□□□ -1.91
NPHP3-204ENST00000469232 KMT2DO14686 5537 aa3.09□□□□□ -1.92
NPHP3-204ENST00000469232 KRTAP9-6A8MVA2 160 aa3.08□□□□□ -1.92
NPHP3-204ENST00000469232 KRTAP5-9P26371 169 aa3.08□□□□□ -1.92
NPHP3-204ENST00000469232 PP632Q6XCG6 107 aa3.08□□□□□ -1.92
NPHP3-204ENST00000469232 KRTAP6-3Q3LI67 103 aa3.07□□□□□ -1.92
NPHP3-204ENST00000469232 KRTAP19-7Q3SYF9 63 aa3.07□□□□□ -1.92
NPHP3-204ENST00000469232 KRTAP5-1Q6L8H4 278 aa3.05□□□□□ -1.92
NPHP3-204ENST00000469232 KTN1-AS1Q86SY8 53 aa3.05□□□□□ -1.92
NPHP3-204ENST00000469232 KRTAP19-5Q3LI72 72 aa3.02□□□□□ -1.93
NPHP3-204ENST00000469232 MACF1Q9UPN3 7388 aaKnown RBP3.02□□□□□ -1.93
NPHP3-204ENST00000469232 MT1EP04732 61 aa3.01□□□□□ -1.93
NPHP3-204ENST00000469232 LCE3CQ5T5A8 94 aa3.01□□□□□ -1.93
NPHP3-204ENST00000469232 KRTAP12-3P60328 96 aa2.99□□□□□ -1.93
NPHP3-204ENST00000469232 PRAC1Q96KF2 57 aa2.99□□□□□ -1.93
NPHP3-204ENST00000469232 SPRR2FQ96RM1 72 aa2.97□□□□□ -1.93
NPHP3-204ENST00000469232 MUC12Q9UKN1 5478 aa2.93□□□□□ -1.94
NPHP3-204ENST00000469232 MT1LQ93083 61 aa2.93□□□□□ -1.94
NPHP3-204ENST00000469232 KRTAP5-4Q6L8H1 288 aa2.92□□□□□ -1.94
NPHP3-204ENST00000469232 KRTAP4-4Q9BYR3 166 aa2.92□□□□□ -1.94
NPHP3-204ENST00000469232 KRTAP19-3Q7Z4W3 81 aa2.91□□□□□ -1.94
NPHP3-204ENST00000469232 MDN1Q9NU22 5596 aa2.89□□□□□ -1.95
NPHP3-204ENST00000469232 SYNE2Q8WXH0 6885 aaKnown RBP2.89□□□□□ -1.95
NPHP3-204ENST00000469232 MT1GP13640 62 aa2.88□□□□□ -1.95
NPHP3-204ENST00000469232 NDUFAF8A1L188 74 aa2.86□□□□□ -1.95
NPHP3-204ENST00000469232 SPRR2EP22531 72 aa2.85□□□□□ -1.95
NPHP3-204ENST00000469232 SPRR2BP35325 72 aa2.85□□□□□ -1.95
NPHP3-204ENST00000469232 SPRR2AP35326 72 aa2.85□□□□□ -1.95
NPHP3-204ENST00000469232 MT1MQ8N339 61 aa2.83□□□□□ -1.96
NPHP3-204ENST00000469232 NEBP20929 6669 aa2.76□□□□□ -1.97
NPHP3-204ENST00000469232 SPRR5A0A1B0GTR4 108 aa2.75□□□□□ -1.97
NPHP3-204ENST00000469232 SPRR2DP22532 72 aa2.75□□□□□ -1.97
NPHP3-204ENST00000469232 LCE3EQ5T5B0 92 aa2.75□□□□□ -1.97
NPHP3-204ENST00000469232 KRTAP4-3Q9BYR4 195 aa2.71□□□□□ -1.97
NPHP3-204ENST00000469232 OBSCNQ5VST9 7968 aa2.7□□□□□ -1.98
NPHP3-204ENST00000469232 KRTAP2-3P0C7H8 128 aa2.68□□□□□ -1.98
NPHP3-204ENST00000469232 KRTAP2-4Q9BYR9 128 aa2.68□□□□□ -1.98
NPHP3-204ENST00000469232 KRTAP20-1Q3LI63 56 aa2.64□□□□□ -1.99
NPHP3-204ENST00000469232 KRTAP5-5Q701N2 237 aaPredicted RBP2.62□□□□□ -1.99
NPHP3-204ENST00000469232 KRTAP2-1Q9BYU5 128 aa2.61□□□□□ -1.99
NPHP3-204ENST00000469232 DSTQ03001 7570 aaKnown RBP2.56□□□□□ -2
NPHP3-204ENST00000469232 MT1AP04731 61 aa2.5□□□□□ -2.01
NPHP3-204ENST00000469232 KRTAP5-2Q701N4 177 aa2.48□□□□□ -2.01
NPHP3-204ENST00000469232 KRTAP6-1Q3LI64 71 aa2.45□□□□□ -2.02
NPHP3-204ENST00000469232 HMCN1Q96RW7 5635 aa2.44□□□□□ -2.02
NPHP3-204ENST00000469232 LUZP6Q538Z0 58 aa2.44□□□□□ -2.02
NPHP3-204ENST00000469232 KRTAP12-4P60329 112 aa2.39□□□□□ -2.03
NPHP3-204ENST00000469232 SYNE1Q8NF91 8797 aaKnown RBP2.38□□□□□ -2.03
NPHP3-204ENST00000469232 MT4P47944 62 aa2.35□□□□□ -2.03
NPHP3-204ENST00000469232 KRTAP20-2Q3LI61 65 aa2.35□□□□□ -2.03
NPHP3-204ENST00000469232 LCE1CQ5T751 118 aa2.28□□□□□ -2.04
NPHP3-204ENST00000469232 LCE1BQ5T7P3 118 aa2.28□□□□□ -2.04
NPHP3-204ENST00000469232 KRTAP6-2Q3LI66 62 aa2.26□□□□□ -2.05
NPHP3-204ENST00000469232 LCE3DQ9BYE3 92 aa2.18□□□□□ -2.06
NPHP3-204ENST00000469232 AHNAK2Q8IVF2 5795 aa2.16□□□□□ -2.06
NPHP3-204ENST00000469232 KRTAP5-8O75690 187 aa2.12□□□□□ -2.07
NPHP3-204ENST00000469232 KRTAP5-10Q6L8G5 202 aa2.1□□□□□ -2.07
NPHP3-204ENST00000469232 GPR98Q8WXG9 6306 aa2.05□□□□□ -2.08
NPHP3-204ENST00000469232 KRTAP5-7Q6L8G8 165 aa1.99□□□□□ -2.09
NPHP3-204ENST00000469232 INE1O15225 51 aa1.95□□□□□ -2.1
NPHP3-204ENST00000469232 MUC5ACP98088 5654 aa1.92□□□□□ -2.1
NPHP3-204ENST00000469232 MUC19Q7Z5P9 8384 aa1.91□□□□□ -2.1
NPHP3-204ENST00000469232 MUC5BQ9HC84 5762 aaPredicted RBP1.74□□□□□ -2.13
NPHP3-204ENST00000469232 AHNAKQ09666 5890 aaKnown RBP1.68□□□□□ -2.14
NPHP3-204ENST00000469232 PRM1P04553 51 aa1.66□□□□□ -2.14
NPHP3-204ENST00000469232 KRTAP21-2Q3LI59 83 aa1.64□□□□□ -2.15
NPHP3-204ENST00000469232 PHGR1C9JFL3 82 aa1.44□□□□□ -2.18
NPHP3-204ENST00000469232 KRTAP21-1Q3LI58 79 aa1.04□□□□□ -2.24
NPHP3-204ENST00000469232 MUC16Q8WXI7 14507 aa0.91□□□□□ -2.26
Retrieved 78 of 20,778 RNA–protein pairs in 139.8 ms