RNA–Protein interactions for RNA: ENST00000469043.1

SCFD1-205, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 696 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-205ENST00000469043 UBR4Q5T4S7 5183 aa1.4□□□□□ -2.18
SCFD1-205ENST00000469043 FAT3Q8TDW7 4589 aa1.4□□□□□ -2.19
SCFD1-205ENST00000469043 MMP24-AS1A0A0U1RRL7 71 aa1.4□□□□□ -2.19
SCFD1-205ENST00000469043 LRP1Q07954 4544 aaKnown RBP1.39□□□□□ -2.19
SCFD1-205ENST00000469043 WFDC13Q8IUB5 93 aa1.39□□□□□ -2.19
SCFD1-205ENST00000469043 HERC2O95714 4834 aa1.38□□□□□ -2.19
SCFD1-205ENST00000469043 MYCBP2O75592 4640 aa1.38□□□□□ -2.19
SCFD1-205ENST00000469043 ABCA13Q86UQ4 5058 aa1.37□□□□□ -2.19
SCFD1-205ENST00000469043 MT1HL1P0DM35 61 aa1.36□□□□□ -2.19
SCFD1-205ENST00000469043 C9orf92A6NGG3 77 aa1.32□□□□□ -2.2
SCFD1-205ENST00000469043 COX6B2Q6YFQ2 88 aa1.32□□□□□ -2.2
SCFD1-205ENST00000469043 LRP2P98164 4655 aa1.31□□□□□ -2.2
SCFD1-205ENST00000469043 HERC1Q15751 4861 aa1.31□□□□□ -2.2
SCFD1-205ENST00000469043 HMCN2Q8NDA2 5059 aa1.28□□□□□ -2.21
SCFD1-205ENST00000469043 LPAP08519 4548 aa1.27□□□□□ -2.21
SCFD1-205ENST00000469043 MUC17Q685J3 4493 aa1.27□□□□□ -2.21
SCFD1-205ENST00000469043 H1FX-AS1Q4G0G2 97 aa1.27□□□□□ -2.21
SCFD1-205ENST00000469043 FLGP20930 4061 aaPredicted RBP1.25□□□□□ -2.21
SCFD1-205ENST00000469043 MUC2Q02817 5179 aa1.24□□□□□ -2.21
SCFD1-205ENST00000469043 S4R3F8 94 aa1.23□□□□□ -2.21
SCFD1-205ENST00000469043 RNF213Q63HN8 5207 aa1.21□□□□□ -2.22
SCFD1-205ENST00000469043 H0YAA0 97 aa1.21□□□□□ -2.22
SCFD1-205ENST00000469043 KRTAP19-2Q3LHN2 52 aa1.2□□□□□ -2.22
SCFD1-205ENST00000469043 FAT4Q6V0I7 4981 aa1.19□□□□□ -2.22
SCFD1-205ENST00000469043 M0QZ58 72 aa1.17□□□□□ -2.22
SCFD1-205ENST00000469043 MT1HP80294 61 aa1.15□□□□□ -2.23
SCFD1-205ENST00000469043 M0R2T5 61 aa1.14□□□□□ -2.23
SCFD1-205ENST00000469043 SPRR2GQ9BYE4 73 aa1.11□□□□□ -2.23
SCFD1-205ENST00000469043 MT2AP02795 61 aa1.1□□□□□ -2.23
SCFD1-205ENST00000469043 MT1FP04733 61 aa1.09□□□□□ -2.23
SCFD1-205ENST00000469043 KRTAP19-3Q7Z4W3 81 aa1.09□□□□□ -2.23
SCFD1-205ENST00000469043 KRTAP19-8Q3LI54 63 aa1.08□□□□□ -2.24
SCFD1-205ENST00000469043 FSIP2Q5CZC0 6907 aa1.08□□□□□ -2.24
SCFD1-205ENST00000469043 MT1BP07438 61 aa1.04□□□□□ -2.24
SCFD1-205ENST00000469043 KRTAP2-3P0C7H8 128 aa1.04□□□□□ -2.24
SCFD1-205ENST00000469043 KRTAP2-4Q9BYR9 128 aa1.04□□□□□ -2.24
SCFD1-205ENST00000469043 KRTAP2-1Q9BYU5 128 aa1.04□□□□□ -2.24
SCFD1-205ENST00000469043 TNP1P09430 55 aa1.03□□□□□ -2.24
SCFD1-205ENST00000469043 KRTAP5-10Q6L8G5 202 aa1.03□□□□□ -2.24
SCFD1-205ENST00000469043 USH2AO75445 5202 aa1.02□□□□□ -2.25
SCFD1-205ENST00000469043 MT1XP80297 61 aa1.01□□□□□ -2.25
SCFD1-205ENST00000469043 SSPOA2VEC9 5147 aa1.01□□□□□ -2.25
SCFD1-205ENST00000469043 MUC16Q8WXI7 14507 aa1□□□□□ -2.25
SCFD1-205ENST00000469043 KRTAP19-6Q3LI70 58 aa0.99□□□□□ -2.25
SCFD1-205ENST00000469043 KRTAP8-1Q8IUC2 63 aa0.96□□□□□ -2.26
SCFD1-205ENST00000469043 GPR98Q8WXG9 6306 aa0.94□□□□□ -2.26
SCFD1-205ENST00000469043 SYNE2Q8WXH0 6885 aaKnown RBP0.93□□□□□ -2.26
SCFD1-205ENST00000469043 KMT2DO14686 5537 aa0.93□□□□□ -2.26
SCFD1-205ENST00000469043 NEBP20929 6669 aa0.92□□□□□ -2.26
SCFD1-205ENST00000469043 KRTAP20-1Q3LI63 56 aa0.92□□□□□ -2.26
SCFD1-205ENST00000469043 MACF1Q9UPN3 7388 aaKnown RBP0.91□□□□□ -2.26
SCFD1-205ENST00000469043 MUC12Q9UKN1 5478 aa0.9□□□□□ -2.26
SCFD1-205ENST00000469043 KRTAP19-5Q3LI72 72 aa0.9□□□□□ -2.27
SCFD1-205ENST00000469043 KRTAP19-7Q3SYF9 63 aa0.9□□□□□ -2.27
SCFD1-205ENST00000469043 MT1EP04732 61 aa0.89□□□□□ -2.27
SCFD1-205ENST00000469043 MT1GP13640 62 aa0.87□□□□□ -2.27
SCFD1-205ENST00000469043 MT1LQ93083 61 aa0.87□□□□□ -2.27
SCFD1-205ENST00000469043 SPRR2FQ96RM1 72 aa0.87□□□□□ -2.27
SCFD1-205ENST00000469043 MDN1Q9NU22 5596 aa0.84□□□□□ -2.27
SCFD1-205ENST00000469043 MT1MQ8N339 61 aa0.84□□□□□ -2.27
SCFD1-205ENST00000469043 PRM1P04553 51 aa0.83□□□□□ -2.28
SCFD1-205ENST00000469043 SPRR2EP22531 72 aa0.82□□□□□ -2.28
SCFD1-205ENST00000469043 SPRR2BP35325 72 aa0.82□□□□□ -2.28
SCFD1-205ENST00000469043 SPRR2AP35326 72 aa0.82□□□□□ -2.28
SCFD1-205ENST00000469043 AHNAK2Q8IVF2 5795 aa0.8□□□□□ -2.28
SCFD1-205ENST00000469043 SPRR2DP22532 72 aa0.79□□□□□ -2.28
SCFD1-205ENST00000469043 DSTQ03001 7570 aaKnown RBP0.77□□□□□ -2.29
SCFD1-205ENST00000469043 MT1AP04731 61 aa0.75□□□□□ -2.29
SCFD1-205ENST00000469043 AHNAKQ09666 5890 aaKnown RBP0.73□□□□□ -2.29
SCFD1-205ENST00000469043 KRTAP21-1Q3LI58 79 aa0.73□□□□□ -2.29
SCFD1-205ENST00000469043 KRTAP6-1Q3LI64 71 aa0.72□□□□□ -2.29
SCFD1-205ENST00000469043 MUC5BQ9HC84 5762 aaPredicted RBP0.69□□□□□ -2.3
SCFD1-205ENST00000469043 SYNE1Q8NF91 8797 aaKnown RBP0.68□□□□□ -2.3
SCFD1-205ENST00000469043 KRTAP20-2Q3LI61 65 aa0.67□□□□□ -2.3
SCFD1-205ENST00000469043 MT4P47944 62 aa0.66□□□□□ -2.3
SCFD1-205ENST00000469043 KRTAP6-2Q3LI66 62 aa0.66□□□□□ -2.3
SCFD1-205ENST00000469043 MUC5ACP98088 5654 aa0.64□□□□□ -2.31
SCFD1-205ENST00000469043 PHGR1C9JFL3 82 aa0.47□□□□□ -2.33
Retrieved 78 of 20,778 RNA–protein pairs in 229 ms