RNA–Protein interactions for RNA: ENST00000468676.5

TMEM39A-205, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 935 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-205ENST00000468676 KRTAP2-4Q9BYR9 128 aa5.6□□□□□ -1.51
TMEM39A-205ENST00000468676 PSPHP1O15172 72 aa5.57□□□□□ -1.52
TMEM39A-205ENST00000468676 C10orf95Q9H7T3 257 aa5.57□□□□□ -1.52
TMEM39A-205ENST00000468676 TNP1P09430 55 aa5.56□□□□□ -1.52
TMEM39A-205ENST00000468676 SPRR2DP22532 72 aa5.55□□□□□ -1.52
TMEM39A-205ENST00000468676 KRTAP19-7Q3SYF9 63 aa5.53□□□□□ -1.52
TMEM39A-205ENST00000468676 RPS28P62857 69 aaKnown RBP5.52□□□□□ -1.53
TMEM39A-205ENST00000468676 K7ERS5 55 aa5.51□□□□□ -1.53
TMEM39A-205ENST00000468676 MT1EP04732 61 aa5.48□□□□□ -1.53
TMEM39A-205ENST00000468676 KRTAP19-5Q3LI72 72 aa5.45□□□□□ -1.54
TMEM39A-205ENST00000468676 KRTAP2-2Q9BYT5 123 aa5.43□□□□□ -1.54
TMEM39A-205ENST00000468676 KRTAP2-1Q9BYU5 128 aa5.43□□□□□ -1.54
TMEM39A-205ENST00000468676 KRTAP19-3Q7Z4W3 81 aa5.42□□□□□ -1.54
TMEM39A-205ENST00000468676 A6NED7 52 aa5.41□□□□□ -1.54
TMEM39A-205ENST00000468676 LCE3AQ5TA76 89 aa5.41□□□□□ -1.54
TMEM39A-205ENST00000468676 KRTAP25-1Q3LHN0 102 aa5.36□□□□□ -1.55
TMEM39A-205ENST00000468676 MT1GP13640 62 aa5.33□□□□□ -1.56
TMEM39A-205ENST00000468676 PP632Q6XCG6 107 aa5.31□□□□□ -1.56
TMEM39A-205ENST00000468676 H3BS24 57 aa5.3□□□□□ -1.56
TMEM39A-205ENST00000468676 MT1LQ93083 61 aa5.27□□□□□ -1.57
TMEM39A-205ENST00000468676 KRTAP12-3P60328 96 aa5.24□□□□□ -1.57
TMEM39A-205ENST00000468676 SVIPQ8NHG7 77 aa5.23□□□□□ -1.57
TMEM39A-205ENST00000468676 MT1MQ8N339 61 aa5.21□□□□□ -1.58
TMEM39A-205ENST00000468676 CDC42SE1Q9NRR8 79 aa5.21□□□□□ -1.58
TMEM39A-205ENST00000468676 KRTAP23-1A1A580 65 aa5.2□□□□□ -1.58
TMEM39A-205ENST00000468676 DSTQ03001 7570 aaKnown RBP5.17□□□□□ -1.58
TMEM39A-205ENST00000468676 ROMO1P60602 79 aa5.13□□□□□ -1.59
TMEM39A-205ENST00000468676 KRTAP4-3Q9BYR4 195 aa5.03□□□□□ -1.6
TMEM39A-205ENST00000468676 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.99□□□□□ -1.61
TMEM39A-205ENST00000468676 KRTAP15-1Q3LI76 137 aa4.97□□□□□ -1.61
TMEM39A-205ENST00000468676 KRTAP5-4Q6L8H1 288 aa4.87□□□□□ -1.63
TMEM39A-205ENST00000468676 LCE3CQ5T5A8 94 aa4.85□□□□□ -1.63
TMEM39A-205ENST00000468676 BRK1Q8WUW1 75 aa4.84□□□□□ -1.63
TMEM39A-205ENST00000468676 MT4P47944 62 aa4.81□□□□□ -1.64
TMEM39A-205ENST00000468676 KRTAP5-11Q6L8G4 156 aa4.79□□□□□ -1.64
TMEM39A-205ENST00000468676 HMCN1Q96RW7 5635 aa4.78□□□□□ -1.64
TMEM39A-205ENST00000468676 KRTAP5-5Q701N2 237 aaPredicted RBP4.76□□□□□ -1.65
TMEM39A-205ENST00000468676 GPR98Q8WXG9 6306 aa4.72□□□□□ -1.65
TMEM39A-205ENST00000468676 KRTAP12-4P60329 112 aa4.64□□□□□ -1.67
TMEM39A-205ENST00000468676 SPRR5A0A1B0GTR4 108 aa4.61□□□□□ -1.67
TMEM39A-205ENST00000468676 PRO0628Q9UI54 55 aa4.59□□□□□ -1.67
TMEM39A-205ENST00000468676 PMAIP1Q13794 54 aa4.58□□□□□ -1.68
TMEM39A-205ENST00000468676 KRTAP20-2Q3LI61 65 aa4.57□□□□□ -1.68
TMEM39A-205ENST00000468676 AHNAK2Q8IVF2 5795 aa4.53□□□□□ -1.68
TMEM39A-205ENST00000468676 KRTAP9-6A8MVA2 160 aa4.51□□□□□ -1.69
TMEM39A-205ENST00000468676 MT1AP04731 61 aa4.5□□□□□ -1.69
TMEM39A-205ENST00000468676 KRTAP6-1Q3LI64 71 aa4.44□□□□□ -1.7
TMEM39A-205ENST00000468676 SYNE1Q8NF91 8797 aaKnown RBP4.42□□□□□ -1.7
TMEM39A-205ENST00000468676 KRTAP5-10Q6L8G5 202 aa4.41□□□□□ -1.7
TMEM39A-205ENST00000468676 KRTAP5-1Q6L8H4 278 aa4.31□□□□□ -1.72
TMEM39A-205ENST00000468676 PRAC1Q96KF2 57 aa4.3□□□□□ -1.72
TMEM39A-205ENST00000468676 KRTAP5-2Q701N4 177 aa4.29□□□□□ -1.72
TMEM39A-205ENST00000468676 KRTAP5-7Q6L8G8 165 aa4.24□□□□□ -1.73
TMEM39A-205ENST00000468676 KTN1-AS1Q86SY8 53 aa4.22□□□□□ -1.73
TMEM39A-205ENST00000468676 KRTAP6-2Q3LI66 62 aa4.21□□□□□ -1.74
TMEM39A-205ENST00000468676 LCE1EQ5T753 118 aa4.21□□□□□ -1.74
TMEM39A-205ENST00000468676 KRTAP4-4Q9BYR3 166 aa4.2□□□□□ -1.74
TMEM39A-205ENST00000468676 MT3P25713 68 aa4.14□□□□□ -1.75
TMEM39A-205ENST00000468676 KRTAP5-8O75690 187 aa3.98□□□□□ -1.77
TMEM39A-205ENST00000468676 OBSCNQ5VST9 7968 aa3.9□□□□□ -1.79
TMEM39A-205ENST00000468676 LUZP6Q538Z0 58 aa3.71□□□□□ -1.82
TMEM39A-205ENST00000468676 MUC5BQ9HC84 5762 aaPredicted RBP3.7□□□□□ -1.82
TMEM39A-205ENST00000468676 MUC5ACP98088 5654 aa3.69□□□□□ -1.82
TMEM39A-205ENST00000468676 A0A0A0MQY5 61 aa3.66□□□□□ -1.82
TMEM39A-205ENST00000468676 AHNAKQ09666 5890 aaKnown RBP3.66□□□□□ -1.82
TMEM39A-205ENST00000468676 LCE3DQ9BYE3 92 aa3.55□□□□□ -1.84
TMEM39A-205ENST00000468676 LCE1CQ5T751 118 aa3.48□□□□□ -1.85
TMEM39A-205ENST00000468676 LCE1BQ5T7P3 118 aa3.48□□□□□ -1.85
TMEM39A-205ENST00000468676 LCE3EQ5T5B0 92 aa3.36□□□□□ -1.87
TMEM39A-205ENST00000468676 NDUFAF8A1L188 74 aa3.26□□□□□ -1.89
TMEM39A-205ENST00000468676 LCE1FQ5T754 118 aa3.08□□□□□ -1.92
TMEM39A-205ENST00000468676 KRTAP21-2Q3LI59 83 aa2.92□□□□□ -1.94
TMEM39A-205ENST00000468676 INE1O15225 51 aa2.8□□□□□ -1.96
TMEM39A-205ENST00000468676 PHGR1C9JFL3 82 aa2.69□□□□□ -1.98
TMEM39A-205ENST00000468676 PRM1P04553 51 aa2.6□□□□□ -1.99
TMEM39A-205ENST00000468676 MUC19Q7Z5P9 8384 aa2.37□□□□□ -2.03
TMEM39A-205ENST00000468676 KRTAP21-1Q3LI58 79 aa1.97□□□□□ -2.09
TMEM39A-205ENST00000468676 MUC16Q8WXI7 14507 aa1.73□□□□□ -2.13
Retrieved 78 of 20,778 RNA–protein pairs in 87.6 ms