RNA–Protein interactions for RNA: ENST00000468472.1

AC006254.1-201, humanhuman

APPRIS P1 TSL 2 BASIC

Gene AC006254.1, Length 5,640 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC006254.1-201ENST00000468472 ABCA13Q86UQ4 5058 aa3.93□□□□□ -1.78
AC006254.1-201ENST00000468472 LOC100996750A0A140TA64 210 aa3.91□□□□□ -1.78
AC006254.1-201ENST00000468472 MT3P25713 68 aa3.9□□□□□ -1.79
AC006254.1-201ENST00000468472 KRTAP4-3Q9BYR4 195 aa3.89□□□□□ -1.79
AC006254.1-201ENST00000468472 LCE2AQ5TA79 106 aaPredicted RBP3.87□□□□□ -1.79
AC006254.1-201ENST00000468472 FAT4Q6V0I7 4981 aa3.79□□□□□ -1.8
AC006254.1-201ENST00000468472 KRTAP9-6A0A140TA67 174 aa3.79□□□□□ -1.8
AC006254.1-201ENST00000468472 KRTAP19-7Q3SYF9 63 aa3.77□□□□□ -1.81
AC006254.1-201ENST00000468472 RNF213Q63HN8 5207 aa3.77□□□□□ -1.81
AC006254.1-201ENST00000468472 LCE1BQ5T7P3 118 aa3.73□□□□□ -1.81
AC006254.1-201ENST00000468472 PRM1P04553 51 aa3.73□□□□□ -1.81
AC006254.1-201ENST00000468472 LCE1DQ5T752 114 aa3.73□□□□□ -1.81
AC006254.1-201ENST00000468472 MT1AP04731 61 aa3.7□□□□□ -1.82
AC006254.1-201ENST00000468472 HMCN2Q8NDA2 5059 aa3.7□□□□□ -1.82
AC006254.1-201ENST00000468472 UBR4Q5T4S7 5183 aa3.67□□□□□ -1.82
AC006254.1-201ENST00000468472 FSIP2Q5CZC0 6907 aa3.66□□□□□ -1.82
AC006254.1-201ENST00000468472 KRTAP20-1Q3LI63 56 aa3.62□□□□□ -1.83
AC006254.1-201ENST00000468472 KRTAP2-3P0C7H8 128 aa3.6□□□□□ -1.83
AC006254.1-201ENST00000468472 KRTAP2-4Q9BYR9 128 aa3.6□□□□□ -1.83
AC006254.1-201ENST00000468472 KRTAP2-1Q9BYU5 128 aa3.6□□□□□ -1.83
AC006254.1-201ENST00000468472 KRTAP4-9Q9BYQ8 210 aa3.6□□□□□ -1.83
AC006254.1-201ENST00000468472 KRTAP9-7A8MTY7 169 aa3.58□□□□□ -1.84
AC006254.1-201ENST00000468472 KRTAP6-3Q3LI67 103 aa3.56□□□□□ -1.84
AC006254.1-201ENST00000468472 LCE1AQ5T7P2 110 aa3.55□□□□□ -1.84
AC006254.1-201ENST00000468472 MUC2Q02817 5179 aa3.54□□□□□ -1.84
AC006254.1-201ENST00000468472 SYNE1Q8NF91 8797 aaKnown RBP3.52□□□□□ -1.85
AC006254.1-201ENST00000468472 LCE5AQ5TCM9 118 aa3.51□□□□□ -1.85
AC006254.1-201ENST00000468472 SYNE2Q8WXH0 6885 aaKnown RBP3.49□□□□□ -1.85
AC006254.1-201ENST00000468472 KRTAP6-1Q3LI64 71 aa3.48□□□□□ -1.85
AC006254.1-201ENST00000468472 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.46□□□□□ -1.85
AC006254.1-201ENST00000468472 KRTAP6-2Q3LI66 62 aa3.45□□□□□ -1.86
AC006254.1-201ENST00000468472 KRTAP9-4Q9BYQ2 154 aa3.43□□□□□ -1.86
AC006254.1-201ENST00000468472 KRTAP9-6A8MVA2 160 aa3.42□□□□□ -1.86
AC006254.1-201ENST00000468472 LCE4AQ5TA78 99 aa3.41□□□□□ -1.86
AC006254.1-201ENST00000468472 KRTAP2-2Q9BYT5 123 aa3.36□□□□□ -1.87
AC006254.1-201ENST00000468472 OBSCNQ5VST9 7968 aa3.31□□□□□ -1.88
AC006254.1-201ENST00000468472 LCE1CQ5T751 118 aa3.18□□□□□ -1.9
AC006254.1-201ENST00000468472 LCE1EQ5T753 118 aa3.18□□□□□ -1.9
AC006254.1-201ENST00000468472 LCE1FQ5T754 118 aa3.18□□□□□ -1.9
AC006254.1-201ENST00000468472 USH2AO75445 5202 aa3.13□□□□□ -1.91
AC006254.1-201ENST00000468472 FCGBPQ9Y6R7 5405 aaPredicted RBP3.04□□□□□ -1.92
AC006254.1-201ENST00000468472 KRTAP5-9P26371 169 aa3.01□□□□□ -1.93
AC006254.1-201ENST00000468472 KRTAP9-9Q9BYP9 154 aa2.98□□□□□ -1.93
AC006254.1-201ENST00000468472 KMT2DO14686 5537 aa2.97□□□□□ -1.93
AC006254.1-201ENST00000468472 MACF1Q9UPN3 7388 aaKnown RBP2.96□□□□□ -1.94
AC006254.1-201ENST00000468472 NEBP20929 6669 aa2.94□□□□□ -1.94
AC006254.1-201ENST00000468472 DSTQ03001 7570 aaKnown RBP2.93□□□□□ -1.94
AC006254.1-201ENST00000468472 KRTAP4-6Q9BYQ5 205 aa2.91□□□□□ -1.94
AC006254.1-201ENST00000468472 SSPOA2VEC9 5147 aa2.91□□□□□ -1.94
AC006254.1-201ENST00000468472 KRTAP20-2Q3LI61 65 aa2.87□□□□□ -1.95
AC006254.1-201ENST00000468472 KRTAP4-11Q9BYQ6 195 aa2.76□□□□□ -1.97
AC006254.1-201ENST00000468472 MUC12Q9UKN1 5478 aa2.74□□□□□ -1.97
AC006254.1-201ENST00000468472 MUC19Q7Z5P9 8384 aa2.68□□□□□ -1.98
AC006254.1-201ENST00000468472 KRTAP5-4Q6L8H1 288 aa2.67□□□□□ -1.98
AC006254.1-201ENST00000468472 MDN1Q9NU22 5596 aa2.65□□□□□ -1.98
AC006254.1-201ENST00000468472 KRTAP4-4Q9BYR3 166 aa2.61□□□□□ -1.99
AC006254.1-201ENST00000468472 KRTAP4-12Q9BQ66 201 aa2.6□□□□□ -1.99
AC006254.1-201ENST00000468472 KRTAP4-2Q9BYR5 136 aa2.6□□□□□ -1.99
AC006254.1-201ENST00000468472 GPR98Q8WXG9 6306 aa2.53□□□□□ -2
AC006254.1-201ENST00000468472 KRTAP5-5Q701N2 237 aaPredicted RBP2.52□□□□□ -2.01
AC006254.1-201ENST00000468472 KRTAP5-3Q6L8H2 238 aa2.32□□□□□ -2.04
AC006254.1-201ENST00000468472 MUC5ACP98088 5654 aa2.26□□□□□ -2.05
AC006254.1-201ENST00000468472 KRTAP5-8O75690 187 aa2.15□□□□□ -2.07
AC006254.1-201ENST00000468472 AHNAK2Q8IVF2 5795 aa2.13□□□□□ -2.07
AC006254.1-201ENST00000468472 HMCN1Q96RW7 5635 aa2.11□□□□□ -2.07
AC006254.1-201ENST00000468472 KRTAP5-2Q701N4 177 aa2.05□□□□□ -2.08
AC006254.1-201ENST00000468472 KRTAP5-10Q6L8G5 202 aa2.03□□□□□ -2.08
AC006254.1-201ENST00000468472 PHGR1C9JFL3 82 aa1.94□□□□□ -2.1
AC006254.1-201ENST00000468472 MUC5BQ9HC84 5762 aaPredicted RBP1.91□□□□□ -2.1
AC006254.1-201ENST00000468472 KRTAP5-11Q6L8G4 156 aa1.85□□□□□ -2.11
AC006254.1-201ENST00000468472 KRTAP5-1Q6L8H4 278 aa1.83□□□□□ -2.12
AC006254.1-201ENST00000468472 AHNAKQ09666 5890 aaKnown RBP1.79□□□□□ -2.12
AC006254.1-201ENST00000468472 KRTAP21-2Q3LI59 83 aa1.75□□□□□ -2.13
AC006254.1-201ENST00000468472 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.61□□□□□ -2.15
AC006254.1-201ENST00000468472 KRTAP5-7Q6L8G8 165 aa1.59□□□□□ -2.16
AC006254.1-201ENST00000468472 KRTAP21-1Q3LI58 79 aa1.56□□□□□ -2.16
AC006254.1-201ENST00000468472 MUC16Q8WXI7 14507 aa1.12□□□□□ -2.23
Retrieved 77 of 20,778 RNA–protein pairs in 218.5 ms