RNA–Protein interactions for RNA: ENST00000468027.5

PTMA-211, Transcript of prothymosin alpha, humanhuman

TSL 1 (best)

Gene PTMA, Length 621 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTMA-211ENST00000468027 KTN1-AS1Q86SY8 53 aa5□□□□□ -1.61
PTMA-211ENST00000468027 KRTAP2-4Q9BYR9 128 aa5□□□□□ -1.61
PTMA-211ENST00000468027 ROMO1P60602 79 aa4.97□□□□□ -1.61
PTMA-211ENST00000468027 KRTAP19-7Q3SYF9 63 aa4.92□□□□□ -1.62
PTMA-211ENST00000468027 SPRR2DP22532 72 aa4.91□□□□□ -1.62
PTMA-211ENST00000468027 C10orf95Q9H7T3 257 aa4.91□□□□□ -1.62
PTMA-211ENST00000468027 MT1EP04732 61 aa4.85□□□□□ -1.63
PTMA-211ENST00000468027 KRTAP2-2Q9BYT5 123 aa4.85□□□□□ -1.63
PTMA-211ENST00000468027 KRTAP2-1Q9BYU5 128 aa4.85□□□□□ -1.63
PTMA-211ENST00000468027 KRTAP25-1Q3LHN0 102 aa4.82□□□□□ -1.64
PTMA-211ENST00000468027 LCE5AQ5TCM9 118 aa4.81□□□□□ -1.64
PTMA-211ENST00000468027 TNP1P09430 55 aa4.8□□□□□ -1.64
PTMA-211ENST00000468027 LCE3BQ5TA77 95 aa4.79□□□□□ -1.64
PTMA-211ENST00000468027 DSTQ03001 7570 aaKnown RBP4.78□□□□□ -1.64
PTMA-211ENST00000468027 LCE4AQ5TA78 99 aa4.78□□□□□ -1.64
PTMA-211ENST00000468027 KRTAP19-5Q3LI72 72 aa4.76□□□□□ -1.65
PTMA-211ENST00000468027 KRTAP19-3Q7Z4W3 81 aa4.76□□□□□ -1.65
PTMA-211ENST00000468027 KRTAP9-4Q9BYQ2 154 aa4.76□□□□□ -1.65
PTMA-211ENST00000468027 LCE3AQ5TA76 89 aa4.7□□□□□ -1.66
PTMA-211ENST00000468027 GPR98Q8WXG9 6306 aa4.7□□□□□ -1.66
PTMA-211ENST00000468027 KRTAP9-9Q9BYP9 154 aa4.68□□□□□ -1.66
PTMA-211ENST00000468027 MT1GP13640 62 aa4.67□□□□□ -1.66
PTMA-211ENST00000468027 PP632Q6XCG6 107 aa4.65□□□□□ -1.67
PTMA-211ENST00000468027 MT1LQ93083 61 aa4.64□□□□□ -1.67
PTMA-211ENST00000468027 KRTAP4-12Q9BQ66 201 aa4.64□□□□□ -1.67
PTMA-211ENST00000468027 LOC100996750A0A140TA64 210 aa4.62□□□□□ -1.67
PTMA-211ENST00000468027 KRTAP4-6Q9BYQ5 205 aa4.62□□□□□ -1.67
PTMA-211ENST00000468027 MT1MQ8N339 61 aa4.6□□□□□ -1.67
PTMA-211ENST00000468027 KRTAP4-3Q9BYR4 195 aa4.5□□□□□ -1.69
PTMA-211ENST00000468027 KRTAP12-3P60328 96 aa4.49□□□□□ -1.69
PTMA-211ENST00000468027 KRTAP4-9Q9BYQ8 210 aa4.44□□□□□ -1.7
PTMA-211ENST00000468027 NDUFAF8A1L188 74 aa4.43□□□□□ -1.7
PTMA-211ENST00000468027 KRTAP4-7Q9BYR0 210 aa4.43□□□□□ -1.7
PTMA-211ENST00000468027 KRTAP5-4Q6L8H1 288 aa4.39□□□□□ -1.71
PTMA-211ENST00000468027 HMCN1Q96RW7 5635 aa4.39□□□□□ -1.71
PTMA-211ENST00000468027 LCE1DQ5T752 114 aa4.37□□□□□ -1.71
PTMA-211ENST00000468027 MT4P47944 62 aa4.28□□□□□ -1.72
PTMA-211ENST00000468027 KRTAP5-5Q701N2 237 aaPredicted RBP4.27□□□□□ -1.73
PTMA-211ENST00000468027 AHNAK2Q8IVF2 5795 aa4.19□□□□□ -1.74
PTMA-211ENST00000468027 LCE3CQ5T5A8 94 aa4.17□□□□□ -1.74
PTMA-211ENST00000468027 SYNE1Q8NF91 8797 aaKnown RBP4.17□□□□□ -1.74
PTMA-211ENST00000468027 KRTAP5-10Q6L8G5 202 aa4.1□□□□□ -1.75
PTMA-211ENST00000468027 SPRR5A0A1B0GTR4 108 aa4.09□□□□□ -1.75
PTMA-211ENST00000468027 KRTAP20-2Q3LI61 65 aa4.09□□□□□ -1.75
PTMA-211ENST00000468027 KRTAP9-6A8MVA2 160 aa4.01□□□□□ -1.77
PTMA-211ENST00000468027 KRTAP12-4P60329 112 aa4.01□□□□□ -1.77
PTMA-211ENST00000468027 KRTAP5-3Q6L8H2 238 aa4.01□□□□□ -1.77
PTMA-211ENST00000468027 KRTAP5-7Q6L8G8 165 aa3.99□□□□□ -1.77
PTMA-211ENST00000468027 MT1AP04731 61 aa3.94□□□□□ -1.78
PTMA-211ENST00000468027 MT3P25713 68 aa3.93□□□□□ -1.78
PTMA-211ENST00000468027 KRTAP6-1Q3LI64 71 aa3.93□□□□□ -1.78
PTMA-211ENST00000468027 LUZP6Q538Z0 58 aa3.92□□□□□ -1.78
PTMA-211ENST00000468027 KRTAP5-2Q701N4 177 aa3.87□□□□□ -1.79
PTMA-211ENST00000468027 KRTAP4-11Q9BYQ6 195 aa3.87□□□□□ -1.79
PTMA-211ENST00000468027 LCE1FQ5T754 118 aa3.75□□□□□ -1.81
PTMA-211ENST00000468027 KRTAP6-2Q3LI66 62 aa3.71□□□□□ -1.82
PTMA-211ENST00000468027 KRTAP4-2Q9BYR5 136 aa3.66□□□□□ -1.82
PTMA-211ENST00000468027 OBSCNQ5VST9 7968 aa3.65□□□□□ -1.82
PTMA-211ENST00000468027 KRTAP5-8O75690 187 aa3.62□□□□□ -1.83
PTMA-211ENST00000468027 AHNAKQ09666 5890 aaKnown RBP3.57□□□□□ -1.84
PTMA-211ENST00000468027 MUC5ACP98088 5654 aa3.54□□□□□ -1.84
PTMA-211ENST00000468027 MUC5BQ9HC84 5762 aaPredicted RBP3.51□□□□□ -1.85
PTMA-211ENST00000468027 KRTAP5-1Q6L8H4 278 aa3.44□□□□□ -1.86
PTMA-211ENST00000468027 INE1O15225 51 aa3.35□□□□□ -1.87
PTMA-211ENST00000468027 LCE1EQ5T753 118 aa3.3□□□□□ -1.88
PTMA-211ENST00000468027 LCE3EQ5T5B0 92 aa3.21□□□□□ -1.9
PTMA-211ENST00000468027 LCE3DQ9BYE3 92 aa3.08□□□□□ -1.92
PTMA-211ENST00000468027 LCE1CQ5T751 118 aa3.07□□□□□ -1.92
PTMA-211ENST00000468027 LCE1BQ5T7P3 118 aa3.07□□□□□ -1.92
PTMA-211ENST00000468027 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.84□□□□□ -1.95
PTMA-211ENST00000468027 KRTAP5-11Q6L8G4 156 aa2.78□□□□□ -1.96
PTMA-211ENST00000468027 KRTAP21-2Q3LI59 83 aa2.62□□□□□ -1.99
PTMA-211ENST00000468027 PRM1P04553 51 aa2.58□□□□□ -2
PTMA-211ENST00000468027 PHGR1C9JFL3 82 aa2.41□□□□□ -2.02
PTMA-211ENST00000468027 KRTAP4-4Q9BYR3 166 aa2.33□□□□□ -2.04
PTMA-211ENST00000468027 MUC19Q7Z5P9 8384 aa2.25□□□□□ -2.05
PTMA-211ENST00000468027 KRTAP21-1Q3LI58 79 aa1.82□□□□□ -2.12
PTMA-211ENST00000468027 MUC16Q8WXI7 14507 aa1.63□□□□□ -2.15
Retrieved 78 of 20,778 RNA–protein pairs in 12 ms