RNA–Protein interactions for RNA: ENST00000467733.1

SSR3-204, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 2

Gene SSR3, Length 873 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-204ENST00000467733 M0R143 59 aa1.4□□□□□ -2.19
SSR3-204ENST00000467733 TRAV22A0A0B4J277 110 aa1.39□□□□□ -2.19
SSR3-204ENST00000467733 A0A1W2PPM0 123 aa1.39□□□□□ -2.19
SSR3-204ENST00000467733 TAX1BP3O14907 124 aa1.39□□□□□ -2.19
SSR3-204ENST00000467733 ACYP1P07311 99 aa1.39□□□□□ -2.19
SSR3-204ENST00000467733 UBL5Q9BZL1 73 aa1.39□□□□□ -2.19
SSR3-204ENST00000467733 MT-ATP8P03928 68 aa1.38□□□□□ -2.19
SSR3-204ENST00000467733 LUZP6Q538Z0 58 aa1.37□□□□□ -2.19
SSR3-204ENST00000467733 H0Y9P7 68 aa1.36□□□□□ -2.19
SSR3-204ENST00000467733 SYNE1Q8NF91 8797 aaKnown RBP1.34□□□□□ -2.19
SSR3-204ENST00000467733 A0A0D9SG42 100 aa1.34□□□□□ -2.19
SSR3-204ENST00000467733 LINC00208Q96KT6 92 aa1.34□□□□□ -2.19
SSR3-204ENST00000467733 HIST1H4AP62805 103 aaKnown RBP1.33□□□□□ -2.2
SSR3-204ENST00000467733 ATOX1O00244 68 aa1.32□□□□□ -2.2
SSR3-204ENST00000467733 UQCRQO14949 82 aa1.32□□□□□ -2.2
SSR3-204ENST00000467733 ETDBQ3ZM63 59 aa1.32□□□□□ -2.2
SSR3-204ENST00000467733 PSPHP1O15172 72 aa1.3□□□□□ -2.2
SSR3-204ENST00000467733 SMIM6P0DI80 62 aa1.29□□□□□ -2.2
SSR3-204ENST00000467733 KRTAP13-4Q3LI77 160 aa1.29□□□□□ -2.2
SSR3-204ENST00000467733 C10orf95Q9H7T3 257 aa1.29□□□□□ -2.2
SSR3-204ENST00000467733 DMAC1Q96GE9 116 aa1.28□□□□□ -2.2
SSR3-204ENST00000467733 LOC105371267A0A1B0GV96 52 aa1.26□□□□□ -2.21
SSR3-204ENST00000467733 MP68P56378 58 aa1.26□□□□□ -2.21
SSR3-204ENST00000467733 COL5A1-AS1Q5SY13 56 aa1.26□□□□□ -2.21
SSR3-204ENST00000467733 F8W1H4 67 aa1.25□□□□□ -2.21
SSR3-204ENST00000467733 GTF2H5Q6ZYL4 71 aa1.24□□□□□ -2.21
SSR3-204ENST00000467733 TRAV7A0A075B6U4 112 aa1.23□□□□□ -2.21
SSR3-204ENST00000467733 ATP5EP2Q5VTU8 51 aa1.23□□□□□ -2.21
SSR3-204ENST00000467733 SPATA8Q6RVD6 105 aa1.23□□□□□ -2.21
SSR3-204ENST00000467733 CHKB-CPT1BH3BT56 60 aa1.22□□□□□ -2.21
SSR3-204ENST00000467733 ACYP2P14621 99 aa1.22□□□□□ -2.21
SSR3-204ENST00000467733 SPTSSBQ8NFR3 76 aa1.22□□□□□ -2.21
SSR3-204ENST00000467733 KRTAP25-1Q3LHN0 102 aa1.21□□□□□ -2.22
SSR3-204ENST00000467733 FAM240AA0A1B0GVK7 77 aa1.2□□□□□ -2.22
SSR3-204ENST00000467733 MT1AP04731 61 aa1.2□□□□□ -2.22
SSR3-204ENST00000467733 SCGB1A1P11684 91 aa1.2□□□□□ -2.22
SSR3-204ENST00000467733 KRTAP6-1Q3LI64 71 aa1.2□□□□□ -2.22
SSR3-204ENST00000467733 LINC00643Q86TS7 51 aa1.2□□□□□ -2.22
SSR3-204ENST00000467733 PRO0628Q9UI54 55 aa1.2□□□□□ -2.22
SSR3-204ENST00000467733 H3BPC8 53 aa1.19□□□□□ -2.22
SSR3-204ENST00000467733 KRTAP6-2Q3LI66 62 aa1.19□□□□□ -2.22
SSR3-204ENST00000467733 K7ERS5 55 aa1.18□□□□□ -2.22
SSR3-204ENST00000467733 KRTAP12-1P59990 96 aa1.18□□□□□ -2.22
SSR3-204ENST00000467733 SNURFQ9Y675 71 aa1.18□□□□□ -2.22
SSR3-204ENST00000467733 TNP1P09430 55 aa1.17□□□□□ -2.22
SSR3-204ENST00000467733 ANAPC13Q9BS18 74 aa1.14□□□□□ -2.23
SSR3-204ENST00000467733 V9GYY9 64 aa1.14□□□□□ -2.23
SSR3-204ENST00000467733 A0A1B0GU33 70 aa1.13□□□□□ -2.23
SSR3-204ENST00000467733 A0A1B0GV90 55 aa1.13□□□□□ -2.23
SSR3-204ENST00000467733 A6NED7 52 aa1.12□□□□□ -2.23
SSR3-204ENST00000467733 COA5Q86WW8 74 aa1.12□□□□□ -2.23
SSR3-204ENST00000467733 SERP1Q9Y6X1 66 aa1.12□□□□□ -2.23
SSR3-204ENST00000467733 A0A1B0GU69 56 aa1.06□□□□□ -2.24
SSR3-204ENST00000467733 SMIM20Q8N5G0 67 aa1.06□□□□□ -2.24
SSR3-204ENST00000467733 J3QR89 54 aa1.05□□□□□ -2.24
SSR3-204ENST00000467733 SERP2Q8N6R1 65 aa1.05□□□□□ -2.24
SSR3-204ENST00000467733 PHGR1C9JFL3 82 aa1□□□□□ -2.25
SSR3-204ENST00000467733 H7BZZ5 65 aa0.99□□□□□ -2.25
SSR3-204ENST00000467733 COX7CP15954 63 aa0.97□□□□□ -2.25
SSR3-204ENST00000467733 K7ERU9 68 aa0.96□□□□□ -2.26
SSR3-204ENST00000467733 PRR15LQ9BU68 103 aa0.93□□□□□ -2.26
SSR3-204ENST00000467733 LINC01558Q9Y6Z2 57 aa0.93□□□□□ -2.26
SSR3-204ENST00000467733 UQCR11O14957 56 aa0.92□□□□□ -2.26
SSR3-204ENST00000467733 MIR22HGQ0VDD5 57 aa0.92□□□□□ -2.26
SSR3-204ENST00000467733 CCDC179H3BU77 68 aa0.91□□□□□ -2.26
SSR3-204ENST00000467733 RPS28P62857 69 aaKnown RBP0.87□□□□□ -2.27
SSR3-204ENST00000467733 MUC16Q8WXI7 14507 aa0.85□□□□□ -2.27
SSR3-204ENST00000467733 Q1T7F1 81 aa0.84□□□□□ -2.27
SSR3-204ENST00000467733 CDC42SE1Q9NRR8 79 aa0.84□□□□□ -2.27
SSR3-204ENST00000467733 ATP5EP56381 51 aaPredicted RBP0.82□□□□□ -2.28
SSR3-204ENST00000467733 ROMO1P60602 79 aa0.82□□□□□ -2.28
SSR3-204ENST00000467733 TMEM258P61165 79 aa0.8□□□□□ -2.28
SSR3-204ENST00000467733 KRTAP21-1Q3LI58 79 aa0.77□□□□□ -2.29
SSR3-204ENST00000467733 KTN1-AS1Q86SY8 53 aa0.75□□□□□ -2.29
SSR3-204ENST00000467733 PMAIP1Q13794 54 aa0.57□□□□□ -2.32
SSR3-204ENST00000467733 BRK1Q8WUW1 75 aa0.54□□□□□ -2.32
SSR3-204ENST00000467733 PRM1P04553 51 aa0.45□□□□□ -2.34
SSR3-204ENST00000467733 INE1O15225 51 aa0.44□□□□□ -2.34
Retrieved 78 of 20,778 RNA–protein pairs in 85.2 ms